BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP002416	35795 =	0 (0.000)	132 (1.300)	98/296	0.1	100%	intergenic (+64/‑194)	Clo1313_0033/Clo1313_0034	Peptidoglycan‑binding lysin domain/4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol kinase
*	?	CP002416	= 731058	NA (NA)	132 (1.300)	98/296	0.1	100%	intergenic (+125/+177)	Clo1313_0644/Clo1313_0645	transposase IS200‑family protein/glycosyl transferase family 2

Only 100 of 125 total aligned reads displayed.

GTAAATAAAAGCAAAAAATAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGTTACGAACTTTATAA  >  CP002416/730913‑731207

gTAAATAAAAGCAAAAAATAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAAc                                                                                                                                                    >  1:1289395/1‑151 (MQ=11)

 taaataaaAGCAAAAAATAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACt                                                                                                                                                   <  1:2101922/151‑1 (MQ=31)

      aaaaGCAAAAAATAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTAt                                                                                                                                              >  1:1829002/1‑151 (MQ=34)

      aaaaGCAAAAAATAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTAt                                                                                                                                              >  1:208902/1‑151 (MQ=34)

       aaaGCAAAAAATAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTAtt                                                                                                                                             <  1:957508/151‑1 (MQ=35)

        aaGCAAAAAATAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTAttt                                                                                                                                            <  1:1712679/151‑1 (MQ=35)

         aGCAAAAAATAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTAtttt                                                                                                                                           >  1:705703/1‑151 (MQ=37)

           cAAAAAATAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTAtttttt                                                                                                                                         >  1:580289/1‑151 (MQ=38)

           cAAAAAATAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTAtttttt                                                                                                                                         <  1:1727541/151‑1 (MQ=38)

              aaaaTAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTAttttttttt                                                                                                                                      <  1:2334988/151‑1 (MQ=40)

               aaaTAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTa                                                                                                                                     <  1:841908/151‑1 (MQ=40)

               aaaTAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTa                                                                                                                                     <  1:1600559/151‑1 (MQ=40)

               aaaTAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTa                                                                                                                                     >  1:1461356/1‑151 (MQ=40)

                aaTAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTAt                                                                                                                                    >  1:309027/1‑151 (MQ=255)

                aaTAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTAATGATTAACTGTTATTTTTTTTTAt                                                                                                                                    <  1:703349/151‑1 (MQ=255)

                  tAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATcc                                                                                                                                  >  1:455976/1‑151 (MQ=255)

                  tAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATcc                                                                                                                                  <  1:2302500/151‑1 (MQ=255)

                   aaaaCCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGCCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCa                                                                                                                                 >  1:1046104/1‑151 (MQ=255)

                      aCCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCaaaa                                                                                                                              <  1:68952/151‑1 (MQ=255)

                      aCCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCaaaa                                                                                                                              <  1:615444/151‑1 (MQ=255)

                       ccACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCaaaaa                                                                                                                             >  1:541590/1‑151 (MQ=255)

                        cACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAAc                                                                                                                            >  1:624495/1‑151 (MQ=255)

                         aCTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACa                                                                                                                           <  1:861762/151‑1 (MQ=255)

                          cTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACaa                                                                                                                          <  1:496012/151‑1 (MQ=255)

                          cTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACaa                                                                                                                          >  1:480388/1‑151 (MQ=255)

                           tttAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACaaa                                                                                                                         >  1:300975/1‑151 (MQ=255)

                             tAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑Tc                                                                                                                      >  1:1002160/1‑151 (MQ=255)

                               gtggtgGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑Tccc                                                                                                                    >  1:1305319/1‑151 (MQ=255)

                                 tgtggCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑Tccccc                                                                                                                  >  1:2426916/2‑151 (MQ=255)

                                      cTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGaa                                                                                                             <  1:337296/151‑1 (MQ=255)

                                        tGAGAAGAATATGCGGTTGGCGAACGATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATa                                                                                                           <  1:612157/151‑1 (MQ=255)

                                        tGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATa                                                                                                           <  1:742860/151‑1 (MQ=255)

                                         gagaAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATaa                                                                                                          <  1:1234688/151‑1 (MQ=255)

                                            aagaaTATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAg                                                                                                       >  1:1243776/1‑151 (MQ=255)

                                              gaaTATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCt                                                                                                     >  1:1130278/1‑151 (MQ=255)

                                               aaTATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTg                                                                                                    >  1:954685/1‑151 (MQ=255)

                                                 tatGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTgag                                                                                                  <  1:753942/151‑1 (MQ=255)

                                                 tatGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTgag                                                                                                  <  1:408852/151‑1 (MQ=255)

                                                   tGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGaa                                                                                                <  1:417923/151‑1 (MQ=255)

                                                         tGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGt                                                                                         >  1:210814/1‑151 (MQ=255)

                                                              aaCCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCa                                                                                    <  1:1977918/151‑1 (MQ=255)

                                                              aaCCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCa                                                                                    <  1:558955/151‑1 (MQ=255)

                                                                 cATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCt                                                                                 >  1:265442/1‑151 (MQ=255)

                                                                  aTTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCtt                                                                                >  1:1317976/1‑151 (MQ=255)

                                                                    tCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCtttt                                                                              <  1:829719/151‑1 (MQ=255)

                                                                       aCGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACGC‑TGTTCTCAGCTTTTAtt                                                                           <  1:2051397/151‑1 (MQ=255)

                                                                         gcgTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCa                                                                         <  1:1545696/151‑1 (MQ=255)

                                                                         gcgTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCa                                                                         >  1:39985/1‑151 (MQ=255)

                                                                            tCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAggg                                                                      >  1:296417/1‑151 (MQ=255)

                                                                                  gACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGtt                                                                <  1:241340/151‑1 (MQ=255)

                                                                                    cGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGtttt                                                              <  1:2460473/151‑1 (MQ=255)

                                                                                    cGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGtttt                                                              >  1:569772/1‑151 (MQ=255)

                                                                                    cGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGtttt                                                              <  1:1992952/151‑1 (MQ=255)

                                                                                    cGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGtttt                                                              >  1:1626843/1‑151 (MQ=255)

                                                                                       tGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTAtt                                                           >  1:1785953/1‑151 (MQ=255)

                                                                                        gCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATtg                                                          <  1:2306083/151‑1 (MQ=255)

                                                                                         cAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATtgg                                                         >  1:2292315/1‑151 (MQ=255)

                                                                                         cAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATtgg                                                         >  1:41538/1‑151 (MQ=255)

                                                                                          aaGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTAATC‑AAAAACAAAATCCCCCCGGATTAAAGGC‑GAGAACACCTGTCTTCGGCTTT‑AATCAGGGGAAGTTTTATtgggg                                                       >  1:1647430/1‑149 (MQ=12)

                                                                                             gACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGc                                                     >  1:437802/1‑151 (MQ=255)

                                                                                                cATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTa                                                  >  1:2085949/1‑151 (MQ=255)

                                                                                                 aTGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTAt                                                 >  1:1121849/1‑151 (MQ=255)

                                                                                                  tGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTAtt                                                >  1:2277988/1‑151 (MQ=255)

                                                                                                   ggccgtataGGGCTAGAGCAAACCACCGGCTGAGACGGTGGATATGATTAAATGTTAGTGGTTTTTAACCAAAAACAAA‑TACAACCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTGTATTGGTGGATTaatg                                               <  1:1196656/146‑4 (MQ=21)

                                                                                                   gCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTg                                               >  1:1060442/1‑151 (MQ=255)

                                                                                                    cccTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGa                                              <  1:2302848/151‑1 (MQ=255)

                                                                                                     ccTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGAt                                             >  1:866635/1‑151 (MQ=255)

                                                                                                     ccTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGAt                                             >  1:1909304/1‑151 (MQ=255)

                                                                                                      cTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGAtt                                            >  1:657741/1‑151 (MQ=255)

                                                                                                       ttATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGAttt                                           <  1:1416670/151‑1 (MQ=255)

                                                                                                       ttATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGAttt                                           <  1:409779/151‑1 (MQ=255)

                                                                                                           aGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTg                                       <  1:238640/151‑1 (MQ=255)

                                                                                                           aGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTg                                       >  1:2013450/1‑151 (MQ=255)

                                                                                                            gggCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGt                                      <  1:576134/151‑1 (MQ=255)

                                                                                                             ggCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGtt                                     <  1:250719/151‑1 (MQ=255)

                                                                                                              gCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGttt                                    <  1:819337/151‑1 (MQ=255)

                                                                                                                tAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGttttt                                  <  1:1499524/151‑1 (MQ=255)

                                                                                                                     cAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGttt                             <  1:38627/151‑1 (MQ=255)

                                                                                                                      aaaCCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTtta                            >  1:2032832/1‑151 (MQ=255)

                                                                                                                        accaccGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTttatt                          >  1:1116990/1‑151 (MQ=255)

                                                                                                                         ccaccGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTttatta                         >  1:1767940/1‑151 (MQ=255)

                                                                                                                           accGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTattatt                       >  1:1350580/1‑151 (MQ=255)

                                                                                                                            ccGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTattattg                      <  1:552914/151‑2 (MQ=255)

                                                                                                                            ccGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTAttattt                      <  1:1954000/151‑1 (MQ=255)

                                                                                                                                 tGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTg                 <  1:165545/151‑1 (MQ=255)

                                                                                                                                  gAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGt                <  1:109984/151‑1 (MQ=255)

                                                                                                                                   aGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGtt               <  1:1005533/151‑1 (MQ=255)

                                                                                                                                   aGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGtt               <  1:564380/151‑1 (MQ=255)

                                                                                                                                    gCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGTTa              >  1:2071789/1‑151 (MQ=255)

                                                                                                                                     ccGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGTTAc             >  1:1774060/1‑151 (MQ=255)

                                                                                                                                     ccGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGTTAc             <  1:889377/151‑1 (MQ=255)

                                                                                                                                      cGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGTTACg            >  1:2248011/1‑151 (MQ=255)

                                                                                                                                      cGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGTTACg            >  1:392692/1‑151 (MQ=255)

                                                                                                                                        gtggtTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGTTACGaa          <  1:2390553/151‑1 (MQ=255)

                                                                                                                                        gtggtTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGTTACGaa          >  1:2453298/1‑151 (MQ=255)

                                                                                                                                        gtggtTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGTTACGaa          <  1:900533/151‑1 (MQ=255)

                                                                                                                                         tggtTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGTTACGAAc         >  1:727252/1‑151 (MQ=255)

                                                                                                                                             tATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGTTACGAACTTta     >  1:2268160/1‑151 (MQ=255)

                                                                                                                                               tGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGTTACGAACTTtata   >  1:1240149/1‑151 (MQ=255)

                                                                                                                                                gATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTGTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGTTACGAACTTTATaa  >  1:762938/1‑151 (MQ=255)

GTAAATAAAAGCAAAAAATAAAACCACTTTAGTGGTGGCTTGAGAAGAATATGCGGTTGGCGAACCATTCAACGCGTCTTAAGACGCTGCAAGGACCATGCCCTTATAGGGCTAGAGCAAACCACCGGCTGAGCCGGTGGTTATGATTAACTGTTATTTTTTTTTATCCAAAAACAAA‑TCCCCCCTGAATAAAAGCTGAGAACAC‑TGTTCTCAGCTTTTATTCAGGGGATGTTTTATTGGTGGCTTATTGATTTATTGTTTTTGGTTTATTATTTTATTGTTACGAACTTTATAA  >  CP002416/730913‑731207

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.