| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP002416 | 2,807,159 | T→A | intergenic (‑6/+15) | Clo1313_2394 ← / ← Clo1313_2395 | Bacteriophage QLRG family, putative DNA packaging/phage major capsid protein, HK97 family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP002416 | 2,807,159 | 0 | T | A | 94.3% | 89.1 / NA | 73 | intergenic (‑6/+15) | Clo1313_2394/Clo1313_2395 | Bacteriophage QLRG family, putative DNA packaging/phage major capsid protein, HK97 family |
| Reads supporting (aligned to +/- strand): ref base T (0/2); major base A (29/37); minor base C (3/1); total (32/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTTTTCGGCATAATATCCTTCCGGCTTTTTCTGGTAACTTTCTGCATAGGCAACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTGACCTTCTCCAAAAGCTCCATGCCGC‑TGC‑C‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACTTGTCCGGTCGCAGCATACAGCTCATTAAGCCGCTTAAAAACCC > CP002416/2807012‑2807301 | ggTTTTCGGCATAATATCCTTCCGGCTTTTTCTGGTAACTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATTAGGTTTGCTTTAACCATCTCCAAAAGTTCCATGCCGC‑AGc‑c > 1:664976/1‑151 (MQ=255) ggCATAATATCCTTCCGGCTTTTTCTGGTAACTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGt > 1:1953338/1‑151 (MQ=255) ggCATAATATCCTTCCGGCTTTTTCTGGTAACTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTGCCATGCCGC‑AGCAC‑C‑TCCGt > 1:152878/1‑151 (MQ=255) ataataTCCTTCCGGCTTTTTCTGGTAACTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAATTGCATCATCTTCGTTGTGTTGCAAGATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGC‑C‑CCTCCGtttt > 1:2605792/1‑151 (MQ=255) ataataTCCTTCCGGCTTTATCTGGTAACTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTACCCTTCTCCAAAAGTTCCATGCCGC‑CGCAC‑C‑TCCGtatt > 1:2999947/1‑148 (MQ=255) tatCCTTCCGGCTTTTTCTGGTAACTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGGTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCAtt < 1:2766461/151‑1 (MQ=255) cTTCCGGCTTTTTATGGTAACTTTCTGCATAGTCCACTGCGGATTTGATATACTCTTGTATAAGTGCATCTTCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGC‑AAC‑TCCGTTTTCATTAAGc < 1:2295331/151‑1 (MQ=255) tCCGGCTTTTTCTGGTAACTTTCTGCATAGGCCACTGCGGCTTTGATATACTCATTTAAAAGTGGATCATCTTAGTGGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCAATGCCGC‑AGCAC‑C‑TCCGTTGTCATTTAGC‑Tg > 1:2933732/1‑151 (MQ=255) cGGCTTTTTCTGGTCACTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGAt < 1:1611815/151‑1 (MQ=255) cGGCTTTTTCTGGTAACTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGAt < 1:872250/151‑1 (MQ=255) tttttCTGGTAACTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑CGC‑C‑CCTCCGTGTTAATTatgcggctttct > 1:1480234/1‑140 (MQ=255) ttttCTGGTAACTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑GCCGTTTTCATTAAGC‑TGATTTctg > 1:1981220/1‑151 (MQ=255) ttCTGGTAACTTTCTGCATAGGCCCCTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTGCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAACAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTctgct < 1:2996652/151‑1 (MQ=255) cTGGTAACTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACATTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TACGTGTTCATTAAGC‑TGAtttatgaagc > 1:1302995/1‑144 (MQ=255) ggTAACTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGC‑C‑CCTCCGTGTTGATTAAGCGTG‑TTTCTGCGGCAg > 1:2270699/1‑151 (MQ=255) tccgatctCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAATGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTACAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGt < 1:1222004/144‑1 (MQ=255) aaCTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGATGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTAt < 1:664977/151‑1 (MQ=255) aaCTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGAATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCAAGCCGC‑CGCAC‑C‑GCCGTTGTCATTAATC‑TGAGTTGTGCGGCAGTAt > 1:3009741/1‑151 (MQ=255) aCTTTCTGCATAGGCCACTCCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTACGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCTC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATc < 1:391533/151‑1 (MQ=255) cTTTCTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑AGATTTCTTCTGCAGTAtat > 1:1619867/1‑149 (MQ=255) cTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCCTTAAGC‑TGATTTCTGCTGCAGTATCTTGAc < 1:2605793/151‑1 (MQ=255) cTGCATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTGGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGAc < 1:3009742/151‑1 (MQ=255) cTGCATAGGCCACTGCGGCTTTGAAATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGGTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCAAAAAGC‑TGATTTCTGGTGCAGTagatcgga > 1:1222005/1‑144 (MQ=255) cATAGGCCACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGc < 1:2015181/151‑1 (MQ=255) aatctattgcTGCGTCTTTGATATACTCTTGTAAAAGTGCTTCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATTACGC‑AGCAC‑C‑TACTTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGc < 1:1133239/142‑1 (MQ=255) gccaCTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAg < 1:1480235/148‑1 (MQ=255) caCTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCTAAAGTTCCATGCCGC‑CGCAC‑C‑TCCGTGTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGAc < 1:2629653/150‑1 (MQ=255) aCTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAAACATCTCCAAAACTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTAATTAAGG‑TGAATTCTGCGGCAGTATCTTGACTGCATCAGACa > 1:1474842/1‑151 (MQ=255) cTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAg < 1:1148276/151‑1 (MQ=255) cTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACATTCTCCAAAAGTTCCATGCCGC‑AGCAC‑A‑TCCGTTTTAATTTAGC‑TGATTTCTGCTGCAGTATCtttcctgcgtcagccag > 1:202258/1‑136 (MQ=255) cTGCGGCTTTGATATACTCTAGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGATCCATGCCTC‑AGCAC‑C‑TCCGAATAAATTAAGC‑TGATTTATTCTTCAGTATCTTTACTCCTTcacacaa > 1:377022/1‑150 (MQ=255) ggCGGCTTTGATCTACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGt < 1:1619866/150‑1 (MQ=255) gtttGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAg < 1:1037558/150‑1 (MQ=255) cTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAg < 1:1938049/151‑1 (MQ=255) cTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAg > 1:41907/1‑151 (MQ=255) tttGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAATC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGc > 1:33077/1‑151 (MQ=255) gtGATATACTCTTGTAAAAGTGACTCATCTGCGTTGTGTTGCAATCTGAGGTTTGCTTTCACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCt < 1:1800828/150‑1 (MQ=255) gtataCTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATCAGGTTTGCTTTACCCTTCTCCAAATGTTCCCTGCCGC‑AGCAC‑C‑TCCGTTTTAATTGAGC‑GGATTTCGGCTGCAGAATCTTGACTACTTCCGAAAGTaaccgagagg > 1:2046759/2‑142 (MQ=255) ataCTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTGATTAAGC‑TGATTTGAGCTGCAGTATCTTGACAGCTACAGACATTACCaccgtgaaa > 1:12814/1‑143 (MQ=255) tctcatGTAAAAGTGCATCAGCTTCGTTGTGTTGCAATATGCGGTTTGCTTTTACCTTCTCGAACAGTTCCATGCCGCATCA‑C‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCCGCTGGCCATc < 1:2355219/146‑1 (MQ=255) cgatctaaaGTGCATCATCTTCGTTGTGGTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCTTGCAGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTac < 1:250838/145‑1 (MQ=255) gTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTAAATGACGC‑AGCAC‑C‑TACGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACg < 1:365539/151‑1 (MQ=255) aaaGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTg < 1:1474841/151‑1 (MQ=255) aaaGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑GCCGTGTTGATTTAGG‑TGATTTCTGCTTCAGTATCTTGACTGCCTCAGCCAGTGCCAGCATGCCaactccaggacg > 1:250837/1‑140 (MQ=255) gCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTTATC‑GGATTTCTGCAGCAGGATCTTGGCGGCGTCAGACAGGACCAGCTTGCCATCTacacccaggggtg > 1:1949573/1‑142 (MQ=255) atcatcTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCATAAGTTCCATGCCGCAGGA‑C‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGcc < 1:2989596/151‑1 (MQ=255) atcatcTTCGTTGTGTTGAAATATGAGTTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCAACACGCTGGGTTGcc < 1:2933731/151‑1 (MQ=255) catcTTCGTTGTGTTTCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCAt < 1:33076/151‑1 (MQ=255) atcTTCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑AGATTTGTGCTGCAGTATCTTGACTTCTTCATACACTACCAGCTTGCCATCTACACCCTGGGGTGCCATg > 1:1649883/1‑151 (MQ=255) cTTCGGTGTGTTGCAATAGGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTAATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGaa < 1:1050606/151‑1 (MQ=255) ttCGTTGTGTTGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑GCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAAt < 1:152879/151‑1 (MQ=255) tCGTTGTGGTGCAATATGAGGTTTGCGTTAACCTTCTCCAAAAGTTCCATGCCGA‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTTTCTTGACTGCTTAAGACAGTACTAGATTGTCATCTACACGCTGGGTTGCCATGAATc < 1:2270700/151‑1 (MQ=255) tgtgTTGCAATATGAGGTTTGCTTTAACCTTCTCCAATCGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTAGCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAAc < 1:2999946/151‑1 (MQ=255) tgtTGCAATATGATGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACtt < 1:1981221/151‑1 (MQ=255) ccgatctatatGAGGTATGCTTTAACCTTCTCCAAAAGTTCCATGCCTCATCA‑C‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTTCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACtt < 1:2005844/144‑1 (MQ=255) tGCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCTGTTTTCATTAAGC‑TGATTTCTGCTGCTGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACTTGTc > 1:2406675/1‑151 (MQ=255) gCAATATGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACTTGTcc < 1:41906/151‑1 (MQ=255) attatGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCAGC‑AGCAC‑C‑TGCTTTTTCATTACGC‑TGAGTTCTGCTGCAGTTTCTTGTCTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACTTGGCCgg < 1:1695350/149‑1 (MQ=255) atatGACGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCAATAAGC‑TGAATACTGCTCCAGAATCTTGGCTGCTTCAGACAGTACCAGCTTGACATCTACACGCTGGGTTGCCCTGAATACAACttagatcgg > 1:2005845/1‑144 (MQ=255) tatGAGGTTTGCTTTAACCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACTTGTCCGGTc > 1:99708/1‑151 (MQ=255) ttGAGGTTTGCTTTAACCTTCACCAAAAGTTCCATGCCTC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTAGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACTTGTCCGGTCg < 1:820265/150‑1 (MQ=255) tttaaCCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACTTGTCCGGTCGCAGCATACaac < 1:2989631/147‑3 (MQ=255) tttaaCCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACTTGTCCGGTCGCAGCATACaac < 1:1538424/147‑3 (MQ=255) tttaaCCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACTTGTCCGGTCGCAGCATACaac < 1:1649884/147‑3 (MQ=255) tttaaCCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTAATTAAGC‑TGATTTCAGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCAAACATGTCCGGTCGCAGCATACaac > 1:2989632/5‑149 (MQ=255) tttaaCCTTCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCAGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCATCTTGACATCTACACGCTGGGTTGCCATGAATCCAACTTGTCCGGTCGCAGCATACaac < 1:377021/147‑3 (MQ=255) ttCTCCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACTTGTCCGGTCGCAGCATACAACTCAttta > 1:1651258/1‑149 (MQ=255) ttCTCCAAAAGTTCCAAGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGAATTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACTTGTCCGGTCGCAGCATACAACTCATTaa < 1:1651257/151‑1 (MQ=255) tcCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTATGGTGGAGTTACATGGCTTCGTCAGCCAGTACCAGCTTTCCAGCTACACCCGGGGTTGCCAGGACTGCCACTAGTCCGGGCGCAGCCTACACCCCATTaatac > 1:570616/1‑148 (MQ=255) tcCAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTGTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGCCGGCTTCAGACCGTTCCAGCGTGCCCTCTACACGCTGGGGTGGCATTCATCCAACGTGTCCCGTCGCACCAttcaacacaataaggc > 1:718327/1‑136 (MQ=255) cAAAAGTTCCATGCCGC‑AGCAC‑C‑TCCGTATTCAATAAGC‑TGATTTCTTCTGCAGTATCTTGACTGCTTCACACAGTACCAGCTTGCCCTCTACACGCTGGGTTGCCATGAATCCAACTTGTCCGGTCGCAGCATACAACTCATTAACCCGc > 1:2023209/1‑151 (MQ=255) gttCCATGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCGTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACTTGTCCGGTCGCAGCATACAACTCATTAAGCCGCTTaaa < 1:2023208/149‑1 (MQ=255) aTGCCGC‑AGCAC‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGCCTGCTGCAGACAGTAACCGCTTGCCCTCTCCACGCTGGGTTGCCCTGCCTCCCACGTGTCCGGTCGCCGCATACAACTCATTAAGCCGCGTAAAAcccc > 1:1546389/1‑151 (MQ=255) | GGTTTTCGGCATAATATCCTTCCGGCTTTTTCTGGTAACTTTCTGCATAGGCAACTGCGGCTTTGATATACTCTTGTAAAAGTGCATCATCTTCGTTGTGTTGCAATATGAGGTTTGCTTTGACCTTCTCCAAAAGCTCCATGCCGC‑TGC‑C‑C‑TCCGTTTTCATTAAGC‑TGATTTCTGCTGCAGTATCTTGACTGCTTCAGACAGTACCAGCTTGCCATCTACACGCTGGGTTGCCATGAATCCAACTTGTCCGGTCGCAGCATACAGCTCATTAAGCCGCTTAAAAACCC > CP002416/2807012‑2807301 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |