Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP002416	1,058,322	C→A	A56D (GCT→GAT)	Clo1313_0908 →	adenine phosphoribosyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP002416	1,058,322	0	C	A	100.0%	17.2 / NA	11	A56D (GCT→GAT)	Clo1313_0908	adenine phosphoribosyltransferase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (6/5);  total (6/5)

TCCCGAAGGAAGGTATAAACTTTATTGATATTACCACCGTACTTCAGGATCCTGAGGCTCTAAAAGAGTGCATTGATTCCATGAAAAAGAAGGTAGAGTCCTTTGGGGAGTTTGACATTATTGTTGGAGCTGAATCCAGAGGATTCATCTTTGGGGCACCGCTGGCATATGCATTGGGAAAAGGTTTTGTACCTATCAGGAAAAAGGGAAAGCTTCCGTACAAGACAATCAGTGTTGAATATGAGCTTGAGTATGG  >  CP002416/1058193‑1058448                                                                                                                                  |                                                                                                                               acccGAAGCAAGGTATAAACTTTATTGATATTCCCACCGTACTTCAAGCTCCTAAGGATCTAAAAGAGTGCATTGATACCATGAAAAAGAATGTAGATTCAATTGTTGAGTTTGACATTATAGTTGGAGATGAATCCAGAGTATTCATcaa                                                                                                           >  1:284870/2‑149 (MQ=255)     taaggatgttattaaCTTTATAGATATTACCAGCGTTCTTCAGGATCCTGAGGCTCTAAAAGAGTGCATTGATTCCATGAAAAAGAAGGTAGAGTCCTTTGGGGAGTTTGACATTATTGTTGGAGATGATTCCAGAGGATTCATCTTTggg                                                                                                       <  1:361819/138‑1 (MQ=255)            ggTATAACCTTTATTTATATTACCACCGTACTTCAGGATCCTGAGGCTCTAAAAGAGTGCATTGATTCCATGAAAAAGAAGGTAGAGTCCTTGGGGGTGTTTGACATTATTGTTGGAGATCATTCCAGAGGATTCATCTTTggggaacggc                                                                                                >  1:184018/1‑145 (MQ=255)                   aCTTTATTGATATTACCACCGTTCTTCAGGATCCTGAGGCTCTAAAAGAGTGCATTGATTCAATGAAAAAGAAGGTAGAGTCCTTTGGGGAGTTTGACATTATTGTTGGAGATGAATCCAGAGGATTCATCTTTGGGGCACCGCTGGCata                                                                                         <  1:225036/151‑1 (MQ=255)                                                        ggCTCTCAAAGAGTGGATTGATTCCATGCAAAAGAAGGTAGAGTCCTTTGGGGAGTTTGACATTATTGTTGGAGATGACTCCAGTGGATTCATCTTTGGGGCACCGCTGGCATATGCATTGGGAAAAGGTTTTGTACCTATCAGGAAAAAg                                                    <  1:140675/151‑1 (MQ=255)                                                           tctAAAAGAGTGCATTGATTCCATGAAAAAGAAGGTAGAGTCCTTTGGGGAGATTGACATTATTGTTGGAGATGAATCCAGAGGATTCATCTTTGGGGCACCGCTGGCATCTGGATTAGGAAAAGGGTTTGTAGCTATCAGGAAAAAgggc                                                 >  1:353121/1‑150 (MQ=255)                                                               aaaGAGTGCATTGATTCCATGAAAAAGAAGCTATAGTCCTTTGGGGAGTTTGACATTATTGTTGTAGATGAAACCAGAGTATTAAACTTTGTTGCACAGCTGGCATATGCATTGTGATAAGTTTTTTTAACTATCaataaaaaatgaaagc                                             >  1:396387/1‑136 (MQ=255)                                                                    gTGCATTGATTCCATGAAAAAGAAGGTAGAGTCCTTAGGTGAGTTTGACATTATTGTTGGAGATGAATCCAGAGGATTCATCTTTGGGGCACCGCTCGCATATGCATTGCGAAAAGGTTTTGTACCTATCAGGAAAAAGGCAAAGCTTccc                                        >  1:205276/1‑150 (MQ=255)                                                                                cattaaaaaGAAGGTAGAGTCCTTTGGGGAGTTTGACATTATTGTTAGAGATGAATACAGAGGATTCATCTTTGTGGCACAGCTGGCAAATGCATTGGGAAAATGATGTGTACCGATCAGGATAAAGGGAAACCTACCGGACAAGACAATc                            >  1:227314/5‑151 (MQ=255)                                                                                                      tggggggtgattGACATTATTGTTGTAGATTAATCTAGAGGTTTCAGCTTTGGGTGACCGCGGGCATTGGCATTGGGATAAGGTTTGGTACCTATCAGGAAAAAGGGAAATCTTCCGTACAAGACAATCTGTGTTGAATATGAGCTTGAGt      <  1:284869/141‑1 (MQ=255)                                                                                                          gggtgTTTGACATTATTGTTGGAGATGAATCCAGAGGATTCATGTTTGGGGCACCGCTGGCATATGCATTGGGAAAAGGTTTTGTACCTATCAGGAATAAGGGAAAGCTTCCGTACAAGACAATCAGTGTTGAATATGAGCTTGAGTATgg  <  1:113547/147‑1 (MQ=255)                                                                                                                                  |                                                                                                                               TCCCGAAGGAAGGTATAAACTTTATTGATATTACCACCGTACTTCAGGATCCTGAGGCTCTAAAAGAGTGCATTGATTCCATGAAAAAGAAGGTAGAGTCCTTTGGGGAGTTTGACATTATTGTTGGAGCTGAATCCAGAGGATTCATCTTTGGGGCACCGCTGGCATATGCATTGGGAAAAGGTTTTGTACCTATCAGGAAAAAGGGAAAGCTTCCGTACAAGACAATCAGTGTTGAATATGAGCTTGAGTATGG  >  CP002416/1058193‑1058448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑