Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP002416	2,367,921	Δ1 bp	intergenic (‑986/+195)	Clo1313_2006 ← / ← Clo1313_2008	ADP‑ribosylation/Crystallin J1/transposase mutator type

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP002416	2,367,921	0	A	.	100.0%	446.6 / NA	99	intergenic (‑986/+195)	Clo1313_2006/Clo1313_2008	ADP‑ribosylation/Crystallin J1/transposase mutator type
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (42/57);  total (42/57)

GCAATAGGTCACATCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGTAGTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCTTACAAAAGAAAAATTT  >  CP002416/2367776‑2368042                                                                                                                                                  |                                                                                                                          gCAATAGGTCACATCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTaaa                                                                                                                      <  1:208423/150‑1 (MQ=255) gCAATAGGTCACATCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTaaa                                                                                                                      >  1:246100/1‑150 (MQ=255) gCAATAGGTCACATCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTaaa                                                                                                                      <  1:205298/150‑1 (MQ=255) gCAATAGGTCACATCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTaaa                                                                                                                      >  1:187513/1‑150 (MQ=255)    aTAGGTCACATCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTa                                                                                                                   >  1:245698/1‑150 (MQ=255)    aTAGGTCACATCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTa                                                                                                                   <  1:207136/150‑1 (MQ=255)     tAGGTCACATCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTaa                                                                                                                  <  1:206512/150‑1 (MQ=255)      aGGTCACATCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAAt                                                                                                                 <  1:208379/150‑1 (MQ=255)      aGGTCACATCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAAt                                                                                                                 <  1:208377/150‑1 (MQ=255)         tCACATCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTTGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAAtttt                                                                                                              <  1:206614/150‑1 (MQ=255)         tCACATCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAAtttt                                                                                                              >  1:229670/1‑150 (MQ=255)          cacaTCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTc                                                                                                             >  1:204520/1‑150 (MQ=255)          cacaTCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTc                                                                                                             >  1:187553/1‑150 (MQ=255)           acaTCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTcc                                                                                                            >  1:187563/1‑150 (MQ=255)           acaTCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTcc                                                                                                            >  1:246174/1‑150 (MQ=255)            caTCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCt                                                                                                           >  1:245836/1‑150 (MQ=255)            caTCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCt                                                                                                           <  1:208351/150‑1 (MQ=255)             aTCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCtt                                                                                                          <  1:207188/150‑1 (MQ=255)              tCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGCGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTc                                                                                                         >  1:2773756/1‑150 (MQ=255)                tATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTa                                                                                                       <  1:237050/150‑1 (MQ=255)                    gACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTATTTTTCCTTCTAGGtt                                                                                                   <  1:206262/150‑1 (MQ=255)                    gACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGtt                                                                                                   <  1:208293/150‑1 (MQ=255)                     aCCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGTCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTa                                                                                                  <  1:207082/150‑1 (MQ=255)                       cATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGt                                                                                                <  1:205346/150‑1 (MQ=255)                       cATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGt                                                                                                <  1:208277/150‑1 (MQ=255)                        aTACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTa                                                                                               >  1:238202/1‑150 (MQ=255)                        aTACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTa                                                                                               <  1:208275/150‑1 (MQ=255)                        aTACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTa                                                                                               >  1:241916/1‑150 (MQ=255)                         tACCTGATTAGGATGATCAATTGTCAAGTGTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTAt                                                                                              <  1:205032/150‑1 (MQ=255)                          aCCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATCCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTACATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTAtt                                                                                             >  1:2177485/1‑150 (MQ=255)                           ccTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTAttt                                                                                            <  1:194474/150‑1 (MQ=255)                           ccTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTAttt                                                                                            >  1:245690/1‑150 (MQ=255)                            cTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTa                                                                                           <  1:204808/150‑1 (MQ=255)                            cTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTa                                                                                           >  1:187651/1‑150 (MQ=255)                             tGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTaa                                                                                          >  1:187661/1‑150 (MQ=255)                               aTTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAat                                                                                        >  1:204602/1‑150 (MQ=255)                               aTTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAat                                                                                        <  1:208233/150‑1 (MQ=255)                                 tAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAatat                                                                                      >  1:181672/1‑150 (MQ=255)                                 tAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAatat                                                                                      >  1:187685/1‑150 (MQ=255)                                   ggATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAatatat                                                                                    <  1:208225/150‑1 (MQ=255)                                      tgatCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATAtttt                                                                                 <  1:183088/150‑1 (MQ=255)                                       gatCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTa                                                                                >  1:246168/1‑150 (MQ=255)                                        atCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTaa                                                                               >  1:187725/1‑150 (MQ=255)                                         tCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAg                                                                              >  1:187731/1‑150 (MQ=255)                                           aaTTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGAc                                                                            >  1:187745/1‑150 (MQ=255)                                            aTTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACt                                                                           >  1:199680/1‑150 (MQ=255)                                            aTTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACt                                                                           <  1:204842/150‑1 (MQ=255)                                              tttCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCg                                                                         >  1:187765/1‑150 (MQ=255)                                               ttCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGa                                                                        >  1:245962/1‑150 (MQ=255)                                               ttCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGa                                                                        <  1:208143/150‑1 (MQ=255)                                                tCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGaa                                                                       <  1:208139/150‑1 (MQ=255)                                                tCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGaa                                                                       <  1:187410/150‑1 (MQ=255)                                                    gTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTc                                                                   >  1:242090/1‑150 (MQ=255)                                                       tctcAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGc                                                                <  1:208097/150‑1 (MQ=255)                                                          cAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCttt                                                             >  1:204612/1‑150 (MQ=255)                                                          cAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCttt                                                             <  1:251670/150‑1 (MQ=255)                                                           aaCAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTg                                                            <  1:208071/150‑1 (MQ=255)                                                           aaCAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTg                                                            >  1:199754/1‑150 (MQ=255)                                                                atatGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCaaa                                                       <  1:208047/150‑1 (MQ=255)                                                                 tatGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAAt                                                      <  1:206018/150‑1 (MQ=255)                                                                   tGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAAttt                                                    <  1:208013/150‑1 (MQ=255)                                                                   tGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAAttt                                                    <  1:182822/150‑1 (MQ=255)                                                                     gATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTta                                                  <  1:208009/150‑1 (MQ=255)                                                                       tACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTtata                                                >  1:187919/1‑150 (MQ=255)                                                                            aTTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCATTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGTGTCGAAAGTCTGCTGTGTCAAATTTTATAGATTc                                           <  1:233444/150‑1 (MQ=18)                                                                            aTTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTc                                           >  1:182034/1‑150 (MQ=255)                                                                             ttCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCa                                          <  1:187971/150‑1 (MQ=255)                                                                                ttACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCaaaa                                       <  1:229669/150‑1 (MQ=255)                                                                                   ccATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGaa                                    <  1:237408/150‑1 (MQ=255)                                                                                      tGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAAttt                                 >  1:242168/1‑150 (MQ=255)                                                                                         aTTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTg                              <  1:182856/150‑1 (MQ=255)                                                                                         aTTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTg                              <  1:229667/150‑1 (MQ=255)                                                                                          ttCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGa                             >  1:229637/1‑150 (MQ=255)                                                                                          ttCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGa                             <  1:187514/150‑1 (MQ=255)                                                                                           tCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGAt                            >  1:229639/1‑150 (MQ=255)                                                                                            cGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATa                           <  1:229665/150‑1 (MQ=255)                                                                                              tttGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAg                         >  1:229641/1‑150 (MQ=255)                                                                                              tttGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAg                         >  1:229643/1‑150 (MQ=255)                                                                                              gttGCTGAGGTTGGGGCCAGGACAGAAACCATGGCAGTGTAAATATTGTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAg                         <  1:2177484/149‑1 (MQ=255)                                                                                               ttGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGa                        >  1:229645/1‑150 (MQ=255)                                                                                                tGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGaa                       <  1:229663/150‑1 (MQ=255)                                                                                                  cTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTCAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAAt                     <  1:194436/150‑1 (MQ=255)                                                                                                   tGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAAtt                    >  1:229647/1‑150 (MQ=255)                                                                                                    gAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTc                   <  1:229661/150‑1 (MQ=255)                                                                                                    gAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTc                   >  1:229649/1‑150 (MQ=255)                                                                                                     aGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCt                  <  1:229659/150‑1 (MQ=255)                                                                                                      ggTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCtt                 <  1:229657/150‑1 (MQ=255)                                                                                                      ggTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCtt                 <  1:185434/150‑1 (MQ=255)                                                                                                       gTTGGGACCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCTTa                <  1:229655/150‑1 (MQ=255)                                                                                                        ttGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCTTAc               <  1:229653/150‑1 (MQ=255)                                                                                                         tGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCTTACa              >  1:199888/1‑150 (MQ=255)                                                                                                            ggCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCTTACaaaa           <  1:182774/150‑1 (MQ=255)                                                                                                             gCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCTTACAAAAg          >  1:199546/1‑150 (MQ=255)                                                                                                                aGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCTTACAAAAGaaa       <  1:242176/150‑1 (MQ=25)                                                                                                                aGGACAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCTTACAAAAGaaa       <  1:229651/150‑1 (MQ=25)                                                                                                                   aCAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCTTACAAAAGAAAAAt    <  1:195524/150‑1 (MQ=17)                                                                                                                    cAGAATCCATGGCTGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCTTACAAAAGAAAAAtt   <  1:226495/150‑1 (MQ=12)                                                                                                                    cAGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCTTACAAAAGAAAAAtt   >  1:199670/1‑150 (MQ=17)                                                                                                                     aGAATCCATGGCAGTGTAAATATTTTTGT‑GTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCTTACAAAAGAAAAAttt  <  1:237480/150‑1 (MQ=14)                                                                                                                                                  |                                                                                                                          GCAATAGGTCACATCTATGGACCATACCTGATTAGGATGATCAATTTTCAAGTTTCTCAACAGATATGGATACAAATTCTTACCATGTATTCGTTTGCTGAGGTTGGGGCCAGGACAGAATCCATGGCAGTGTAAATATTTTTGTAGTAAACTAATTTTCCTTCTATGTTAGTATTTAAATATATTTTAAGACTCGAAAGTCTGCTTTGTCAAATTTTATAGATTCAAAAGAATTTCTGATAAGAAATTCTTACAAAAGAAAAATTT  >  CP002416/2367776‑2368042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑