BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP002416	= 1927659	1 (0.010)	134 (0.970)	104/298	0.4	60.6%	coding (60/279 nt)	Clo1313_1651	transposase IS3/IS911 family protein
*	?	CP002416	= 2370048	173 (1.250)	134 (0.970)	104/298	0.4	60.6%	intergenic (‑709/+1247)	Clo1313_2008/Clo1313_2009	transposase mutator type/hypothetical protein

Only 100 of 307 total aligned reads displayed.

CAGCAATCTCATTCAGCGTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACTAGCTTTTGAGATAATCCCAAGTTAGCTTTGA  >  CP002416/2369900‑2370196

   caATCTCATTCAGCGTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATg                                                                                                                                                  <  1:14761/150‑1 (MQ=11)

    aaTCTCATTCAGCGTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatga                                                                                                                                                 <  1:13585‑M2/150‑6 (MQ=255)

     aTCTCATTCAGCGTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGAc                                                                                                                                                <  1:16814/150‑1 (MQ=32)

       ctcATTCAGCGTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCt                                                                                                                                              >  1:13605/1‑150 (MQ=32)

          aTTCAGCGTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCtgtg                                                                                                                                           <  1:14705/150‑1 (MQ=35)

          aTTCAGCGTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCtgtg                                                                                                                                           >  1:13635/1‑150 (MQ=35)

           ttCAGCGTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTgg                                                                                                                                          <  1:16714/150‑1 (MQ=35)

            tCAGCGTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGt                                                                                                                                         >  1:13667/1‑150 (MQ=37)

            tCAGCGTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGt                                                                                                                                         >  1:170800/1‑150 (MQ=37)

              aGCGTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAg                                                                                                                                       >  1:221767/1‑150 (MQ=38)

                cGTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGa                                                                                                                                     >  1:13687/1‑150 (MQ=40)

                 gTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactat                                                                                                                                    >  1:16008‑M2/1‑132 (MQ=255)

                 gTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGaa                                                                                                                                    >  1:221943/1‑150 (MQ=40)

                  ttctttctCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgttgacctgaatcactctt                                                                                                                                   <  1:171986‑M2/150‑20 (MQ=255)

                  ttctttctCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAag                                                                                                                                   >  1:170382/1‑150 (MQ=255)

                   tctttctCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAaga                                                                                                                                  <  1:173778/150‑1 (MQ=255)

                   tctttctCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAACGACCTGTGGTAGGAaga                                                                                                                                  <  1:14647/150‑1 (MQ=255)

                     tttctCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGc                                                                                                                                <  1:15840/150‑1 (MQ=255)

                     tttctCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGc                                                                                                                                <  1:14631/150‑1 (MQ=255)

                      ttctCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgatctcaatcactatctttg                                                                                                                               <  1:227539‑M2/150‑24 (MQ=255)

                        ctcCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgct                                                                                                                             >  1:14605‑M2/1‑125 (MQ=255)

                         tcCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAAt                                                                                                                            >  1:13761/1‑150 (MQ=255)

                          cccTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATAACCTGTGGTAGGAAGAGCCAATa                                                                                                                           <  1:2100051/150‑1 (MQ=255)

                           ccTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttt                                                                                                                          <  1:13787‑M2/150‑29 (MQ=255)

                            cTTGATGACCTCAATCTCTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACa                                                                                                                         <  1:14581/150‑1 (MQ=255)

                              tgatgaCCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATc                                                                                                                       >  1:13801/1‑150 (MQ=255)

                                atgaCCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCtt                                                                                                                     <  1:16128/150‑1 (MQ=255)

                                 tgaCCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCttt                                                                                                                    <  1:166298/150‑1 (MQ=255)

                                  gaCCTCAATCTCTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCtttt                                                                                                                   <  1:14525/150‑1 (MQ=255)

                                    ccTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTg                                                                                                                 >  1:13851/1‑150 (MQ=255)

                                      tCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgt                                                                                                               <  1:13873‑M2/150‑40 (MQ=255)

                                        aaTCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTc                                                                                                             <  1:14489/150‑1 (MQ=255)

                                         aTCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgttgacctcaatccctatttttgctttttgttcaggtgtata                                                                                                            <  1:14346‑M2/150‑43 (MQ=255)

                                           ctctaTTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTGTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaat                                                                                                          >  1:173278‑M2/3‑106 (MQ=255)

                                           cACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaat                                                                                                          >  1:14469‑M2/1‑106 (MQ=255)

                                            aCTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatg                                                                                                         <  1:13909‑M2/150‑46 (MQ=255)

                                                tttttGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgttgacctcaatcactattttctgttttggttcaggtgtataatgtttt                                                                                                     <  1:227513‑M2/150‑50 (MQ=255)

                                                  tttGCTTTTTGTTCAGGTGTAAACTGTTTTCTCTTTTCCATAGTTCCATGCTAACTTATTTGGGCTGTTTTGTCTGTCTTTATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttct                                                                                                   >  1:173532‑M2/1‑99 (MQ=255)

                                                   ttGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGttt                                                                                                  <  1:171121/150‑1 (MQ=255)

                                                          ttGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTa                                                                                           >  1:171127/1‑150 (MQ=255)

                                                           tGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgttgacctcaatcactatttttgctttttgttcaggtgtataatgttttctcttttccat                                                                                          <  1:227185‑M2/150‑61 (MQ=255)

                                                           tGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTAc                                                                                          <  1:171115/150‑1 (MQ=255)

                                                            gTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccata                                                                                         >  1:14361‑M2/1‑89 (MQ=255)

                                                             ttCAGGTGTAATATGTTTTCTCTTGTCCATAGTTCCATTCTAACTTATTTGGGCTGGTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatag                                                                                        >  1:15972‑M2/1‑88 (MQ=255)

                                                              tcaggggcaaaaTGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGACTGTTTTGTCTGTCTTAATTTTTGGTATCTTTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTAccca                                                                                       >  1:170844/9‑148 (MQ=25)

                                                                 ggTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACa                                                                                    <  1:171107/150‑1 (MQ=255)

                                                                   tgtatactgttttctCTTTTCCATAGTTCCATTCAAGCTTATTTTGTCTTTTTTCTCTCTCTTAATTTGTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccat                                                                                  >  1:174608‑M2/8‑82 (MQ=255)

                                                                    gtAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCt                                                                                 >  1:221807/1‑150 (MQ=255)

                                                                      aaaaTGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattct                                                                               <  1:14065‑M2/150‑72 (MQ=255)

                                                                      aaaaTGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCttt                                                                               <  1:166174/150‑1 (MQ=255)

                                                                       aaaTGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattcta                                                                              >  1:14307‑M2/1‑78 (MQ=255)

                                                                           gTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTcccc                                                                          <  1:16856/150‑1 (MQ=255)

                                                                           gTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTcccc                                                                          >  1:171133/1‑150 (MQ=255)

                                                                            ttttCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaactta                                                                         >  1:14271‑M2/1‑73 (MQ=255)

                                                                              ttCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCca                                                                       >  1:170808/1‑150 (MQ=255)

                                                                                ctctTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttcctttctaacttatttg                                                                     <  1:171962‑M2/150‑82 (MQ=255)

                                                                                   ttttCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAAt                                                                  >  1:171139/1‑150 (MQ=255)

                                                                                   ttttCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAAt                                                                  <  1:16296/150‑1 (MQ=255)

                                                                                    tttCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATa                                                                 >  1:170439/1‑150 (MQ=255)

                                                                                      tCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATaca                                                               >  1:170790/1‑150 (MQ=255)

                                                                                       ccATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgtt                                                              >  1:14213‑M2/1‑62 (MQ=255)

                                                                                             ttCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtct                                                        <  1:14183‑M2/150‑95 (MQ=255)

                                                                                             ttCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTa                                                        >  1:170445/1‑150 (MQ=255)

                                                                                             ttCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTa                                                        >  1:221935/1‑150 (MQ=255)

                                                                                               ccATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtctgt                                                      <  1:171852‑M2/150‑97 (MQ=255)

                                                                                                 aTTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAAtt                                                    >  1:221821/1‑150 (MQ=255)

                                                                                                  ttCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgtgctgttttgtctgtctt                                                   <  1:171970‑M2/150‑100 (MQ=255)

                                                                                                  ttCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtctgtctt                                                   <  1:14566‑M2/150‑100 (MQ=255)

                                                                                                   tCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtctgtctta                                                  <  1:13539‑M2/150‑101 (MQ=255)

                                                                                                      aaCTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCa                                               <  1:170431/150‑1 (MQ=255)

                                                                                                         ttATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAAtt                                            >  1:170451/1‑150 (MQ=255)

                                                                                                              ggggCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATcc                                       >  1:221913/2‑150 (MQ=255)

                                                                                                               gggCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCa                                      >  1:170457/1‑150 (MQ=255)

                                                                                                               gggCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCa                                      <  1:170425/150‑1 (MQ=255)

                                                                                                                 gCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtctgtcttaatttttggtatcat                                    <  1:13545‑M2/150‑115 (MQ=255)

                                                                                                                 gCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCaaa                                    <  1:170419/150‑1 (MQ=255)

                                                                                                                  cTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCaaaa                                   >  1:170826/1‑150 (MQ=255)

                                                                                                                   tGTTTTGTCTGTCTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtctgtcttaatttttggtatcatta                                  >  1:14803‑M2/1‑34 (MQ=255)

                                                                                                                    gTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACt                                 >  1:221773/1‑150 (MQ=255)

                                                                                                                      tttctctctctttcttttttgtttcattatagatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtctgtcttaatttttggtatcattatag                               >  1:166406‑M2/15‑31 (MQ=255)

                                                                                                                      tttGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACAACTTGTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACTAg                               <  1:171101/150‑1 (MQ=255)

                                                                                                                      tttGTCTCTCTTAATTTTTTGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtctgtcttaatttttggtatcattatag                               >  1:166042‑M2/1‑31 (MQ=255)

                                                                                                                        tgtctgtcTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtctgtcttaatttttggtatcattatagtt                             <  1:14252‑M2/150‑122 (MQ=255)

                                                                                                                        tgtctgtcTTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtctgtcttaatttttggtatcattatagtt                             <  1:13567‑M2/150‑122 (MQ=255)

                                                                                                                         gtctgtctTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACTAGCtt                            >  1:170463/1‑150 (MQ=255)

                                                                                                                          tctgtctTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtctgtcttaatttttggtatcattatagttta                           >  1:14745‑M2/1‑27 (MQ=255)

                                                                                                                           ctgtctTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACTAGCtttt                          <  1:174054/150‑1 (MQ=255)

                                                                                                                           ctgtctTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACTAGCtttt                          <  1:170413/150‑1 (MQ=255)

                                                                                                                             gtctTAATTTTTGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtctgtcttaatttttggtatcattatagtttatct                        <  1:227195‑M2/150‑127 (MQ=255)

                                                                                                                              tctTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACTAGCTTTTgag                       <  1:170407/150‑1 (MQ=255)

                                                                                                                                    tttttGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtctgtcttaatttttggtatcattatagtttatctgaaacct                 >  1:14673‑M2/1‑17 (MQ=255)

                                                                                                                                    tttttGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACTAGCTTTTGAGATAATc                 >  1:170469/1‑150 (MQ=255)

                                                                                                                                      tttGGTATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtctgtcttaatttttggtatcattatagtttatctgaaacctgg               <  1:227503‑M2/150‑136 (MQ=255)

                                                                                                                                         ggTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACTAGCTTTTGAGATAATCCCAAg            <  1:170401/150‑1 (MQ=255)

                                                                                                                                           tATCATTATAgatgacctcaatcactatttttgctttttgttcaggtgtaaaatgttttctcttttccatagttccattctaacttatttgggctgttttgtctgtcttaatttttggtatcattatagtttatctgaaacctggacgtc          <  1:13733‑M2/150‑141 (MQ=255)

                                                                                                                                             tCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACTAGCTTTTGAGATAATCCCAAGTTAg        >  1:172168/1‑150 (MQ=255)

                                                                                                                                             tCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACTAGCTTTTGAGATAATCCCAAGTTAg        <  1:16480/150‑1 (MQ=255)

                                                                                                                                               aTTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACTAGCTTTTGAGATAATCCCAAGTTAGCt      >  1:170475/1‑150 (MQ=255)

                                                                                                                                                 tataAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACTAGCTTTTGAGATAATCCCAAGTTAGCttt    <  1:15882/150‑1 (MQ=255)

                                                                                                                                                   taAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACTAGCTTTTGAGATAATCCCAAGTTAGCTTTGa  <  1:170395/150‑1 (MQ=255)

CAGCAATCTCATTCAGCGTTCTTTCTCCCTTGATGACCTCAATCACTATTTTTGCTTTTTGTTCAGGTGTAAAATGTTTTCTCTTTTCCATAGTTCCATTCTAACTTATTTGGGCTGTTTTGTCTGTCTTAATTTTTGGTATCATTATAAATGACCTGTGGTAGGAAGAGCCAATACATCTTTTTGTTTCCCTTCAGGTTTAATATTACCTAACATCTTTTCCCCCCAACAATACACTTTTTAAATTCTTCAATTAATCCAAAACTAGCTTTTGAGATAATCCCAAGTTAGCTTTGA  >  CP002416/2369900‑2370196

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.