Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0024162,343,3730TC42.0% 75.0 / 306.6 219E981G (GAA→GGA) Clo1313_1990Spore coat protein CotH
Reads supporting (aligned to +/- strand):  ref base T (57/70);  new base C (45/47);  total (102/117)
Fisher's exact test for biased strand distribution p-value = 5.85e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.83e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 223 total aligned reads displayed.

CAGTCGAGTTAATCTTTCCATTGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAACACATAGCCTTCTTTTGGTATCGC  >  CP002416/2343224‑2343521
                                                                                                                                                     |                                                                                                                                                    
cagtcGAGTTAATCTTTCCATTGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAAttt                                                                                                                                                      <  1:2088997/150‑1 (MQ=255)
    cGAGTTAATCTTTCCATTGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAgg                                                                                                                                                  >  1:4747104/1‑150 (MQ=255)
      aGTTAATCTTTCCATTGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGAt                                                                                                                                                >  1:2088865/1‑150 (MQ=255)
       gTTAATCTTTCCATTGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATc                                                                                                                                               <  1:2088993/150‑1 (MQ=255)
        ttAATCTTTCCATTGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCg                                                                                                                                              <  1:2088985/150‑1 (MQ=255)
        ttAATCTTTCCATTGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCg                                                                                                                                              <  1:2088989/150‑1 (MQ=255)
         tAATCTTTCCATTGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCgg                                                                                                                                             >  1:2088869/1‑150 (MQ=255)
           aTCTTTCCATTGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGa                                                                                                                                           <  1:2088202/150‑1 (MQ=255)
            tCTTTCCATTGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAg                                                                                                                                          <  1:2088510/150‑1 (MQ=255)
              tttCCATTGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGtt                                                                                                                                        <  1:2088979/150‑1 (MQ=255)
                  cATTGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCAt                                                                                                                                    <  1:2088975/150‑1 (MQ=255)
                   aTTGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCAtt                                                                                                                                   <  1:2088971/150‑1 (MQ=255)
                    ttGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCAttt                                                                                                                                  <  1:2088228/150‑1 (MQ=255)
                        cGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAg                                                                                                                              <  1:2088188/150‑1 (MQ=255)
                         gTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAgg                                                                                                                             >  1:2088873/1‑150 (MQ=255)
                          tCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGc                                                                                                                            <  1:2088967/150‑1 (MQ=255)
                               aTCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGaa                                                                                                                       <  1:2088488/150‑1 (MQ=255)
                               aTCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGaa                                                                                                                       <  1:2088396/150‑1 (MQ=255)
                                 ccccTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATa                                                                                                                     >  1:4747134/1‑150 (MQ=255)
                                 ccccTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATa                                                                                                                     >  1:2089094/1‑150 (MQ=255)
                                  cccTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATAc                                                                                                                    <  1:2088963/150‑1 (MQ=255)
                                     tGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGc                                                                                                                 >  1:2088879/1‑150 (MQ=255)
                                      gCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCt                                                                                                                >  1:2089086/1‑150 (MQ=255)
                                       cAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTg                                                                                                               >  1:4747130/1‑150 (MQ=255)
                                        aaTAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGt                                                                                                              >  1:2088883/1‑150 (MQ=255)
                                           aaCATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAAc                                                                                                           <  1:2088524/150‑1 (MQ=255)
                                            aCATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACg                                                                                                          <  1:2088957/150‑1 (MQ=255)
                                                ttATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCa                                                                                                      >  1:2088893/1‑150 (MQ=255)
                                                      gCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCAt                                                                                                >  1:2088897/1‑150 (MQ=255)
                                                       cTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCAtt                                                                                               <  1:2088953/150‑1 (MQ=255)
                                                       cTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCAtt                                                                                               <  1:2088102/150‑1 (MQ=255)
                                                       cTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCAtt                                                                                               >  1:2089060/1‑150 (MQ=255)
                                                        tCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTc                                                                                              <  1:2088416/150‑1 (MQ=255)
                                                         ccGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAGTTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCg                                                                                             >  1:2088427/1‑150 (MQ=255)
                                                         ccGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCg                                                                                             >  1:2088901/1‑150 (MQ=255)
                                                         ccGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCg                                                                                             >  1:2089064/1‑150 (MQ=255)
                                                          cGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGa                                                                                            <  1:2088949/150‑1 (MQ=255)
                                                            gTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGaaa                                                                                          >  1:2088905/1‑150 (MQ=255)
                                                             tttCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAg                                                                                         <  1:2088504/150‑1 (MQ=255)
                                                             tttCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAg                                                                                         >  1:4747018/1‑150 (MQ=255)
                                                              ttCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAgg                                                                                        <  1:2088152/150‑1 (MQ=255)
                                                              ttCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAgg                                                                                        <  1:2088945/150‑1 (MQ=255)
                                                               tCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGt                                                                                       >  1:4747320/1‑150 (MQ=255)
                                                                     cATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTg                                                                                 <  1:2088262/150‑1 (MQ=255)
                                                                     cATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTg                                                                                 >  1:2088911/1‑150 (MQ=255)
                                                                      aTAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGt                                                                                >  1:4746876/1‑150 (MQ=255)
                                                                       tAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGtt                                                                               >  1:4747084/1‑150 (MQ=255)
                                                                         aaGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTAt                                                                             <  1:2088939/150‑1 (MQ=255)
                                                                          aGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATc                                                                            >  1:4747012/1‑150 (MQ=255)
                                                                            cAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGt                                                                          >  1:4747110/1‑150 (MQ=255)
                                                                              gATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTAt                                                                        >  1:4747308/1‑150 (MQ=255)
                                                                              gATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTAt                                                                        <  1:2088250/150‑1 (MQ=255)
                                                                              gATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTAt                                                                        <  1:2088552/150‑1 (MQ=255)
                                                                              gATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTAt                                                                        <  1:2088546/150‑1 (MQ=255)
                                                                               aTACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATc                                                                       <  1:2088244/150‑1 (MQ=255)
                                                                                tACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATcc                                                                      >  1:2088915/1‑150 (MQ=255)
                                                                                 aCCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCg                                                                     <  1:2088888/150‑1 (MQ=255)
                                                                                  ccTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCga                                                                    >  1:2088917/1‑150 (MQ=255)
                                                                                   cTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCgat                                                                   <  1:2088232/150‑1 (MQ=255)
                                                                                      ttACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCgatgat                                                                <  1:2088935/150‑1 (MQ=255)
                                                                                      ttACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACAGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCga                                                                    >  1:4747298/1‑146 (MQ=255)
                                                                                       tACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGatgatg                                                               >  1:2088921/1‑150 (MQ=255)
                                                                                            gCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCa                                                          <  1:2088576/150‑1 (MQ=255)
                                                                                            gCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCa                                                          <  1:2088933/150‑1 (MQ=255)
                                                                                              caacaaGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCGCCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAAc                                                        <  1:4747351/150‑1 (MQ=255)
                                                                                              caacaaGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAAc                                                        >  1:2089078/1‑150 (MQ=255)
                                                                                               aacaaGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACg                                                       <  1:2088514/150‑1 (MQ=255)
                                                                                               aacaaGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACg                                                       >  1:4747114/1‑150 (MQ=255)
                                                                                               aacaaGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACg                                                       >  1:4747098/1‑150 (MQ=255)
                                                                                                acaaGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACgg                                                      <  1:2088931/150‑1 (MQ=255)
                                                                                                  aaGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATTGTATCCGATGATGCCTCAACGGAt                                                    >  1:4747122/1‑150 (MQ=255)
                                                                                                  aaGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGAt                                                    >  1:2088925/1‑150 (MQ=255)
                                                                                                  aaGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGAt                                                    <  1:2088538/150‑1 (MQ=255)
                                                                                                        gtgGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGttt                                              <  1:2089129/150‑1 (MQ=255)
                                                                                                          ggAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTtat                                            >  1:4747316/1‑150 (MQ=255)
                                                                                                           gAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTtata                                           <  1:2088886/150‑1 (MQ=255)
                                                                                                            aGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATAc                                          >  1:4747022/1‑150 (MQ=255)
                                                                                                            aGTTAACCGCTCCATCCCCACTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATAc                                          >  1:2089003/1‑150 (MQ=255)
                                                                                                             gTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATAcc                                         >  1:2089007/1‑150 (MQ=255)
                                                                                                              ttAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATAccc                                        <  1:2089125/150‑1 (MQ=255)
                                                                                                                     cTCCATCCCCATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGt                                 >  1:4747246/1‑150 (MQ=255)
                                                                                                                           ccccATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGCTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGCCaa                           >  1:2089011/1‑150 (MQ=255)
                                                                                                                            cccATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCaaa                          <  1:2088652/150‑1 (MQ=255)
                                                                                                                             ccATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAac                         <  1:2089119/150‑1 (MQ=255)
                                                                                                                              cATTATAGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAaca                        <  1:2089117/150‑1 (MQ=255)
                                                                                                                                ttATAGTCCCCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGGTGATGCCTCAGCGGATCCGTTTATCCCCTCCCAGTGGTCAAAcaca                      <  1:5408959/150‑1 (MQ=255)
                                                                                                                                ttATAGTCACCATTCAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCATCGGATCCGTTTATACCCTCCCAGTGGTCAAAcaca                      <  1:2088560/150‑1 (MQ=255)
                                                                                                                                 tataGTCACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAACACAt                     <  1:2089113/150‑1 (MQ=255)
                                                                                                                                  ataGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAACACATa                    <  1:2089109/150‑1 (MQ=255)
                                                                                                                                   taGTCACCAGACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATTCCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCATCGGATCCGTTTATACCCTCCCAGTGGTCAAACACATAg                   <  1:5409037/150‑1 (MQ=255)
                                                                                                                                     gTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAACACATAGcc                 <  1:2089103/150‑1 (MQ=255)
                                                                                                                                     gTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAACACATAGcc                 <  1:2089101/150‑1 (MQ=255)
                                                                                                                                      tCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAACACATAGCct                <  1:2088214/150‑1 (MQ=255)
                                                                                                                                       cACCATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAACACATAGCctt               >  1:4746906/1‑150 (MQ=255)
                                                                                                                                          cATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAACACATAGCcttctt            >  1:4747230/1‑150 (MQ=255)
                                                                                                                                          cATACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAACACATAGCcttctt            >  1:4746410/1‑150 (MQ=255)
                                                                                                                                            tACAAAATTCCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAACACATAGCCTTCtttt          <  1:2089097/150‑1 (MQ=255)
                                                                                                                                              cAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAACACATAGCCTTCTTTTgg        <  1:2089091/150‑1 (MQ=255)
                                                                                                                                                aaaTTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAACACATAGCCTTCTTTTGGTa      >  1:2089015/1‑150 (MQ=255)
                                                                                                                                                   tttCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAACACATAGCCTTCTTTTGGTATCg   <  1:5419085/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
CAGTCGAGTTAATCTTTCCATTGCCGTCAAGATCCCCTGCAATAACATTTATCTGCTCCGGTTTCAAAGCATAAAGCAGATACCTTTTACATGCCAACAAGTCTGTGGAGTTAACCGCTCCATCCCCATTATAGTCACCATACAAAATTTCAGGATCGGGAGTTTCATTTTCAGGCCTGAATACCGCTGTAACGTTCAAATCATTCGAAAGGTTGACTGTTATCGTATCCGATGATGCCTCAACGGATCCGTTTATACCCTCCCAGTGGTCAAACACATAGCCTTCTTTTGGTATCGC  >  CP002416/2343224‑2343521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑