| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP002416 | 2,704,920 | (T)7→8 | intergenic (‑1451/+836) | Clo1313_2294 ← / ← Clo1313_2296 | two component transcriptional regulator, winged helix family/flavin reductase domain protein FMN‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP002416 | 2,704,920 | 1 | . | T | 99.0% | 186.4 / ‑3.4 | 96 | intergenic (‑1451/+836) | Clo1313_2294/Clo1313_2296 | two component transcriptional regulator, winged helix family/flavin reductase domain protein FMN‑binding protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base T (52/43); total (52/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.12e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
TCATAATCCCTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTT‑AAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCGTACAATTTCAT > CP002416/2704771‑2705023 | tcATAATCCCTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCttt‑tttt < 1:1852654/150‑1 (MQ=35)tcATAATCCCTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCttt‑tttt < 1:2371598/150‑1 (MQ=35)tcATAATCCCTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCttt‑tttt < 1:642665/150‑1 (MQ=35)tcATAATCCCTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCttt‑tttt < 1:808120/150‑1 (MQ=35) cATAATCCCTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCttt‑ttttt > 1:2982243/1‑149 (MQ=25) aTAATCCCTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCttt‑ttttta < 1:2596219/150‑3 (MQ=21) tAATCCCTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCttt‑tttttaa > 1:2833107/1‑147 (MQ=18) tAATCCCTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCttt‑tttttaa > 1:2098338/1‑147 (MQ=18) tAATCCCTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCttt‑tttttaa < 1:521520/150‑4 (MQ=18) aaTCCCTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCttt‑tttttaag < 1:1144362/150‑5 (MQ=17) tCCCTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAagag > 1:1727565/1‑150 (MQ=14) tCCCTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAagag < 1:2081822/150‑1 (MQ=14) ccTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGAt > 1:2921078/1‑150 (MQ=14) cTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGAtt < 1:368223/150‑1 (MQ=14) tGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGc > 1:154883/1‑150 (MQ=14) tGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGc < 1:190665/150‑1 (MQ=14) gAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCa > 1:2473359/1‑150 (MQ=14) gAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCa < 1:1160669/150‑1 (MQ=14) gTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCaaa < 1:1795160/150‑1 (MQ=14) gTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCaaa > 1:2487688/1‑150 (MQ=14) cAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGGTCCATAGCTTTTTCGCTTTTTAATAGCAAAAGCATCAATGCAAGCAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTTCTTTT‑AAGAGATTGCAAACt < 1:48706/150‑1 (MQ=11) aaTCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTg < 1:1862528/150‑1 (MQ=14) aTCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGt > 1:203891/1‑150 (MQ=14) tatCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACtt < 1:260966/150‑1 (MQ=14) atCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGATATTGCAAACTGTACttt < 1:229025/150‑1 (MQ=9) atCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACttt > 1:1237112/1‑150 (MQ=14) atCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACttt < 1:2685156/150‑1 (MQ=14) tCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACtttt > 1:1882473/1‑150 (MQ=14) cAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTa > 1:2811368/1‑150 (MQ=14) gTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCg > 1:2916324/1‑150 (MQ=14) gTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCg < 1:2028481/150‑1 (MQ=14) gTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCg > 1:1931985/1‑150 (MQ=14) tATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGa > 1:3032924/1‑150 (MQ=14) tATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGa > 1:1967247/1‑150 (MQ=14) ttGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGatat < 1:1829178/150‑1 (MQ=14) tGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCcac < 1:1390830/150‑1 (MQ=14) cGTAAAAATATTGATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGCGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCacaa > 1:579744/1‑150 (MQ=11) cGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCacaa < 1:2453240/150‑1 (MQ=14) cGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCacaa < 1:780599/150‑1 (MQ=14) gTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAATCAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCacaac < 1:678633/150‑1 (MQ=9) gTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCacaac > 1:2058389/1‑150 (MQ=14) gTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCacaac > 1:2378483/1‑150 (MQ=14) tAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCacaaca > 1:1996327/1‑150 (MQ=14) aaaaaTATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACAt < 1:290953/150‑1 (MQ=14) aaaaaTATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACAt > 1:1125112/1‑150 (MQ=14) aaaaTATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAAATGTACTTTTACCGATATCCACAACAtt < 1:1029568/150‑1 (MQ=9) aaaaTATCTACCATAATTGTTCCATAGCTTTTTCGCTTTTTCATAGCAATATCATCAATGCAAACAGCTGTTACTCTCTTTTCGCCAACAACCGGTGTTTCTTT‑TTTTTAAGAGACTGCAAACTGTACCTTTACCGATATCCacaatatc > 1:840034/1‑146 (MQ=11) aaaTATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACAttt < 1:1230857/150‑1 (MQ=14) aaaTATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACAttt > 1:1787588/1‑150 (MQ=14) tctatcATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCtt < 1:1447815/150‑1 (MQ=14) tctatcATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCtt < 1:2398508/150‑1 (MQ=14) ctatcATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCttt < 1:2921079/150‑1 (MQ=14) ctatcATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCttt > 1:393225/1‑150 (MQ=14) ctatcATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCttt < 1:192621/150‑1 (MQ=14) tatcATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTa < 1:133764/150‑1 (MQ=14) tatcATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTa > 1:402777/1‑150 (MQ=14) atcATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTag > 1:2250676/1‑150 (MQ=14) tcATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTaga < 1:2986467/150‑1 (MQ=14) tcATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTaga > 1:364524/1‑150 (MQ=14) cATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTGCTTTTACCGATATCCACAACATTTTCCTTTagag < 1:38654/150‑1 (MQ=9) tAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCt > 1:2015396/1‑150 (MQ=14) aaTTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCtt < 1:914105/150‑1 (MQ=14) aTTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCttt < 1:421390/150‑1 (MQ=14) ttCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGAt < 1:2260562/150‑1 (MQ=14) cATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGAtgct > 1:2731504/1‑150 (MQ=14) aTAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGAtgctg > 1:2831986/1‑150 (MQ=14) aTAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGAtgctg < 1:2261660/150‑1 (MQ=14) tAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGAtgctgc > 1:387386/1‑150 (MQ=14) cTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAAc > 1:880991/1‑150 (MQ=14) cTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAAc < 1:2070429/150‑1 (MQ=14) tttCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGa > 1:1469245/1‑150 (MQ=14) cGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACt < 1:1201582/150‑1 (MQ=14) cGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGCAACt > 1:841345/1‑150 (MQ=9) gCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTg > 1:1035321/1‑150 (MQ=14) gCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTg > 1:2113730/1‑150 (MQ=14) gCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTg < 1:1391840/150‑1 (MQ=14) cTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGc > 1:1072316/1‑150 (MQ=14) tttttAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCa > 1:325893/1‑150 (MQ=14) ttAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAAtt > 1:1259441/1‑150 (MQ=14) tAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAAttt > 1:645412/1‑150 (MQ=14) gCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGa > 1:1672509/1‑150 (MQ=14) gCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGa > 1:1173192/1‑150 (MQ=14) aaaaTCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACa < 1:1492757/150‑1 (MQ=14) aaaTCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAg > 1:2404115/1‑150 (MQ=14) atcatcAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTc < 1:181356/150‑1 (MQ=14) atcatcAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTc > 1:686699/1‑150 (MQ=14) tcatcaATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCg < 1:2897697/150‑1 (MQ=14) tcatcaATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCg < 1:2419666/150‑1 (MQ=14) catcaATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCGt > 1:2881269/1‑150 (MQ=14) atcaATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCGTa < 1:154746/150‑1 (MQ=14) caATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCGTACa > 1:803552/1‑150 (MQ=14) caATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCGTACa > 1:1012750/1‑150 (MQ=14) tGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCGTACAAtt < 1:1265431/150‑1 (MQ=14) tGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCGTACAAtt > 1:2326697/1‑150 (MQ=14) tGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCGTACAAtt > 1:2725720/1‑150 (MQ=14) tGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGCGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCGTACAAtt > 1:268496/1‑150 (MQ=9) gCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCGTACAAttt < 1:283301/150‑1 (MQ=14) cAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCGTACAATTTc > 1:2073127/1‑150 (MQ=14) aaaCAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCGTACAATTTCa > 1:1321646/1‑150 (MQ=14) aaCAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTTTAAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCGTACAATTTCAt > 1:1478094/1‑150 (MQ=14) | TCATAATCCCTTGAGTCAATCATATCAAGTATTTGATGCGTAAAAATATCTATCATAATTGTTCCATAGCTTTTTCGCTTTTTAATAGCAAAATCATCAATGCAAACAGCTGTTACTGTCTTTTTGTCAACAACCGGTGTTTCTTT‑TTTT‑AAGAGATTGCAAACTGTACTTTTACCGATATCCACAACATTTTCCTTTAGAGCTTTTGATGCTGCAACGGAACTGCAATTTATTGACAGTCGTACAATTTCAT > CP002416/2704771‑2705023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |