Predicted mutation
evidence seq id position mutation annotation gene description
RA CP002416 907,843 A→G N687S (AAC→AGC)  Clo1313_0786 → YD repeat protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP002416907,8430AG100.0% 616.7 / NA 196N687S (AAC→AGC) Clo1313_0786YD repeat protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (99/97);  total (99/97)

Only 100 of 196 total aligned reads displayed.

ATTGACCCGTTGGGCAATGTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAACACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTATGATGAAATGAACAGGCTTA  >  CP002416/907698‑907989
                                                                                                                                                 |                                                                                                                                                  
aTTGACCCGTTGGGCAATGTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGa                                                                                                                                               <  1:5288637/151‑1 (MQ=18)
  tGACCCGTTGGGCAATGTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACGCCAACCACCGCAGGATAAGCACGata                                                                                                                                             <  1:4425780/151‑1 (MQ=255)
  tGACCCGTTGGGCAATGTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGata                                                                                                                                             >  1:780580/1‑151 (MQ=25)
   gACCCGTTGGGCAATGTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGatat                                                                                                                                            <  1:3832800/151‑1 (MQ=25)
    aCCCGTTGGGCAATGTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATAtt                                                                                                                                           >  1:2000247/1‑151 (MQ=25)
       cGTTGGGCAATGTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTccc                                                                                                                                        <  1:2206990/151‑1 (MQ=25)
        gTTGGGCAATGTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCcg                                                                                                                                       >  1:3551002/1‑151 (MQ=25)
           gggCAATGTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCcggac                                                                                                                                    <  1:4622779/151‑1 (MQ=25)
               aaTGTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGaa                                                                                                                                <  1:3446718/151‑1 (MQ=25)
                aTGTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAg                                                                                                                               <  1:1037316/151‑1 (MQ=25)
                aTGTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAg                                                                                                                               <  1:1496058/151‑1 (MQ=25)
                 tGTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGc                                                                                                                              >  1:947882/1‑151 (MQ=25)
                  gTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCa                                                                                                                             >  1:3050898/1‑151 (MQ=25)
                          ggTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAg                                                                                                                     >  1:184081/1‑151 (MQ=37)
                           gTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGa                                                                                                                    >  1:587728/1‑151 (MQ=38)
                            tAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGAt                                                                                                                   >  1:1756931/1‑151 (MQ=255)
                            tAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGAt                                                                                                                   <  1:5069631/151‑1 (MQ=255)
                              aaaTATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATaa                                                                                                                 <  1:4996621/151‑1 (MQ=255)
                                 tatGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGt                                                                                                              <  1:1956284/151‑1 (MQ=38)
                                 tatGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGt                                                                                                              <  1:2330519/151‑1 (MQ=38)
                                  atgatgAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTa                                                                                                             <  1:1236618/151‑1 (MQ=37)
                                   tgatgaGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTAt                                                                                                            <  1:3611214/151‑1 (MQ=25)
                                     atgaGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGa                                                                                                          <  1:2110965/151‑1 (MQ=25)
                                      tgaGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGAc                                                                                                         <  1:2164501/151‑1 (MQ=25)
                                       gagaACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGAcg                                                                                                        <  1:4599188/151‑1 (MQ=25)
                                        agaACGGCAACAAGATAAAAGAGATCAACCCGAATTACTATAGGTCTGAGAAAGATGTCGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCATAGATAAAGTATGAcgc                                                                                                       >  1:1281365/1‑151 (MQ=11)
                                         gaACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGAcgcg                                                                                                      <  1:4524720/151‑1 (MQ=25)
                                         gaACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGAcgcg                                                                                                      <  1:274245/151‑1 (MQ=25)
                                         gaACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGAcgcg                                                                                                      >  1:336313/1‑151 (MQ=25)
                                           aCGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGa                                                                                                    <  1:1619033/151‑1 (MQ=25)
                                            cGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGGCGGTATAGGAATAGAATACAAATATGACACCAACCACCGCGGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGAcgcgtaa                                                                                                   <  1:4106234/151‑4 (MQ=255)
                                              gCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAgg                                                                                                 <  1:1104301/151‑1 (MQ=25)
                                              gCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAgg                                                                                                 >  1:2463442/1‑151 (MQ=25)
                                                aacaaGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCa                                                                                               >  1:41626/1‑151 (MQ=25)
                                                aacaaGATAAAAGAGATCAACCCGAACTACTATAGTACTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCa                                                                                               <  1:3639678/151‑1 (MQ=255)
                                                 acaaGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCaa                                                                                              <  1:4054255/151‑1 (MQ=25)
                                                   aaGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAata                                                                                            >  1:2977715/1‑151 (MQ=25)
                                                    aGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAatat                                                                                           <  1:4497643/151‑1 (MQ=25)
                                                      aTAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATataa                                                                                         <  1:6116/151‑1 (MQ=25)
                                                      aTAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATataa                                                                                         >  1:4854142/1‑151 (MQ=25)
                                                      aTAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATataa                                                                                         >  1:2860552/1‑151 (MQ=25)
                                                       tAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATataat                                                                                        >  1:4418473/1‑151 (MQ=25)
                                                       tAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATataat                                                                                        >  1:3533171/1‑151 (MQ=25)
                                                        aaaaGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATataata                                                                                       <  1:3292070/151‑1 (MQ=25)
                                                         aaaGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATAtaataa                                                                                      >  1:867060/1‑151 (MQ=25)
                                                          aaGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATaaa                                                                                     >  1:134254/1‑151 (MQ=25)
                                                          aaGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATaaa                                                                                     <  1:4230898/151‑1 (MQ=25)
                                                           agagATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAg                                                                                    <  1:2553824/151‑1 (MQ=25)
                                                           agagATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAg                                                                                    <  1:5153423/151‑1 (MQ=25)
                                                            gagaTCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGa                                                                                   >  1:2500030/1‑151 (MQ=25)
                                                              gaTCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACg                                                                                 <  1:2409963/151‑1 (MQ=25)
                                                               aTCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGa                                                                                <  1:27250/151‑1 (MQ=25)
                                                                tCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGat                                                                               <  1:451269/151‑1 (MQ=25)
                                                                  aaCCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGatat                                                                             >  1:3717351/1‑151 (MQ=25)
                                                                   aCCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATc                                                                            <  1:1380668/151‑1 (MQ=25)
                                                                    cccGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCGCCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATcc                                                                           <  1:3410087/151‑1 (MQ=255)
                                                                    cccGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATcc                                                                           <  1:4915430/151‑1 (MQ=25)
                                                                    cccGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATcc                                                                           >  1:5046161/1‑151 (MQ=25)
                                                                      cGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTg                                                                         <  1:2056816/151‑1 (MQ=25)
                                                                      cGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTg                                                                         <  1:3770474/151‑1 (MQ=25)
                                                                       gAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTgg                                                                        <  1:1644815/151‑1 (MQ=25)
                                                                            actaTAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGa                                                                   >  1:1817290/1‑151 (MQ=25)
                                                                             ctaTAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGAt                                                                  <  1:2615161/151‑1 (MQ=25)
                                                                              tataGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGAtt                                                                 >  1:172796/1‑151 (MQ=25)
                                                                               ataGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATta                                                                >  1:3390332/1‑151 (MQ=25)
                                                                                 aGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATtata                                                              <  1:632931/151‑1 (MQ=25)
                                                                                  gTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATaa                                                             >  1:156203/1‑151 (MQ=25)
                                                                                  gTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATaa                                                             >  1:704555/1‑151 (MQ=25)
                                                                                    tCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACa                                                           >  1:1656906/1‑151 (MQ=25)
                                                                                             gATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTgg                                                  <  1:1829740/151‑1 (MQ=25)
                                                                                              aTGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGa                                                 >  1:2698427/1‑151 (MQ=25)
                                                                                               tGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGAt                                                >  1:4224131/1‑151 (MQ=25)
                                                                                               tGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGAt                                                >  1:623280/1‑151 (MQ=25)
                                                                                               tGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGAt                                                <  1:2246406/151‑1 (MQ=25)
                                                                                                       taGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGcc                                        >  1:2351741/1‑151 (MQ=25)
                                                                                                        aGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCg                                       >  1:4149032/1‑151 (MQ=25)
                                                                                                         ggAATAGAATACAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCgg                                      >  1:4645738/1‑151 (MQ=25)
                                                                                                          gaatagaataCAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCggg                                     <  1:2886894/151‑1 (MQ=25)
                                                                                                              agaataCAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATg                                 <  1:3772817/151‑1 (MQ=25)
                                                                                                              agaataCAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATg                                 <  1:3132387/151‑1 (MQ=25)
                                                                                                               gaataCAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATgg                                >  1:3509899/1‑151 (MQ=25)
                                                                                                                aataCAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGa                               <  1:4334256/151‑1 (MQ=25)
                                                                                                                   aCAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGta                            >  1:453981/1‑151 (MQ=25)
                                                                                                                    cAAATATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGtat                           <  1:645369/151‑1 (MQ=25)
                                                                                                                     aaaTATGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGtata                          <  1:4393065/151‑1 (MQ=25)
                                                                                                                       atatGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATAcc                        >  1:2356619/1‑151 (MQ=25)
                                                                                                                        tatGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCt                       >  1:1696340/1‑151 (MQ=25)
                                                                                                                         atGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTa                      <  1:87713/151‑1 (MQ=25)
                                                                                                                         atGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTa                      <  1:4783015/151‑1 (MQ=25)
                                                                                                                          tGACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTat                     >  1:3795947/1‑151 (MQ=25)
                                                                                                                           gACACCAACCACCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTatg                    <  1:3166445/151‑1 (MQ=25)
                                                                                                                              accaaccaCCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTatgatg                 <  1:4817185/151‑1 (MQ=25)
                                                                                                                               ccaaccaCCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTAtgatga                <  1:3193501/151‑1 (MQ=25)
                                                                                                                                caaccaCCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTATGatgaa               >  1:3979664/1‑151 (MQ=25)
                                                                                                                                caaccaCCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTATGatgaa               >  1:34600/1‑151 (MQ=25)
                                                                                                                                 aaccaCCGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTATGatgaaa              >  1:2789713/1‑151 (MQ=25)
                                                                                                                                    caccGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTATGatgaaatga           <  1:3668815/151‑1 (MQ=25)
                                                                                                                                    caccGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTATGatgaaatga           >  1:5092001/1‑151 (MQ=25)
                                                                                                                                     accGCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTATGatgaaatgaa          >  1:3029834/1‑151 (MQ=25)
                                                                                                                                        gCAGGATAAGCACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTATGATGAAATGAACAg       <  1:3347866/151‑1 (MQ=25)
                                                                                                                                                 |                                                                                                                                                  
ATTGACCCGTTGGGCAATGTTTTTGCGGTAAAATATGATGAGAACGGCAACAAGATAAAAGAGATCAACCCGAACTACTATAGTTCTGAGAAAGATGACGGTATAGGAATAGAATACAAATATGACACCAACCACCGCAGGATAAACACGATATTCCCGGACGGAAGCATGTCAAAGATAAAGTATGACGCGGAAGGCAATATAATAAAGACGATATCCTGGAAGGATTATAACAAGGATTTGGATGACGGGCCGGGGATGGAGTATACCTATGATGAAATGAACAGGCTTA  >  CP002416/907698‑907989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: