| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP002416 | 1,970,337 | 0 | A | C | 32.6% | 298.9 / 16.0 | 135 | G1064G (GGT→GGG) | Clo1313_1683 | phosphoribosylformylglycinamidine synthase |
| Reads supporting (aligned to +/- strand): ref base A (71/18); new base C (0/43); total (71/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.17e-20 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 154 total aligned reads displayed.
GATTTCACCATAAGGTACAAGTCCAAGCTTTATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTCCACCACCCCGCCGGCCTTT > CP002416/1970187‑1970487 | gttttCACCATAAGGTACAAGTCCAAGCTTTATAAGAGCCTGGAAGCCGTTGGATATACCCAGCATAAGTCCGTCTCTATCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGAGGCAATAAATTTT‑CCTGaa > 1:3700082/3‑151 (MQ=255)gATTTCACCATAAGGTACAATTCCAAGCTTTATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACTCCGTGGCAATAAATTTT‑CCTGaa < 1:545556/151‑1 (MQ=255)gATTTCACCATAAGGTACAAGTCCAAGCTTTATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGaa > 1:2707225/1‑151 (MQ=255) tttCACCATAAGGTACAAGTCCAAGCTTTATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAAcc > 1:4302509/1‑151 (MQ=255) ttCACCATAAGGTACAAGTCCAAGCTTTATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCg < 1:3769523/151‑1 (MQ=255) tCACCATAAGGTACAAGTCCAAGCTTTATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGt > 1:66815/1‑151 (MQ=255) cACCATAAGGTACAAGTCCAAGCTTTATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTc < 1:3397765/151‑1 (MQ=255) aCCATAAGGTACAAGTCCACGCTTTATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCg > 1:1034283/1‑151 (MQ=255) ccATAAGGTACAAGTCCAAGCTTTATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCgg < 1:801353/151‑1 (MQ=255) cATAAGGTACAAGTCCAAGCTTTATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCggg > 1:2999009/1‑151 (MQ=255) tAAGGTACAAGTCCAAGCTTTATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTTCCCTT‑GG‑ATTTCTAAACTCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCt < 1:1125421/151‑1 (MQ=255) gTCCAAGCTGTATAAGAGCCTGGAAGCCGTTGCATAGACCCAGCATAAGTCCGTAACTCTCTTTAAGAAGCCGAATTACCGCAGCTTTGACCCTT‑GG‑ATTTCTAAGCGCCGAGGCAATAAATTTT‑CCTGGGCCGTCGGGCTCATCAccgcc < 1:3400613/151‑1 (MQ=255) gCTTTATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGaa > 1:3963566/1‑151 (MQ=255) cTTTATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAAc > 1:1781225/1‑151 (MQ=255) tttATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAAcc > 1:3513618/1‑151 (MQ=255) ttaaaagggCCTGGAAGCCGTTGCATATACCCAGCATAAGCCCGTCTCTCTCTTTAAGAGGCCTCATTCCCGCATTTTTTCCCCTG‑GG‑ATTTCTAACCGCCGGGGCAAAAATTTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAAccc < 1:281606/143‑1 (MQ=255) ataAGGGCCTGGAAGCCTTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTCCCCTG‑GG‑ATTTCTAAACGCCGGGGCAATAAATTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAACCCTc < 1:1427334/151‑1 (MQ=255) ataAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTc > 1:3325327/1‑151 (MQ=255) aagggccgagAAGCCGTTGCATATACCCAGCTTAAGTCCGTCTCTCTCTTTAAGAGCCCTCATTCCCGCATTTTTTTCCCTT‑GG‑TTTTCTAAACGCCGTGGCAAAAATTTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCg < 1:3838738/142‑1 (MQ=255) agCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGt > 1:1194473/1‑151 (MQ=255) ccTGGAAGCCGTTGCATATCCCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTCCCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTat < 1:219729/151‑1 (MQ=255) ccTGGAAGCCGTTGCATATCCCCAGCATAAGCCCGTCTCTCTCTTTAAGAAGCCTCATTCCCGCATCTTTTCCCCTT‑GG‑ATTTCTAACCGCCGTGGAAATAAATTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTat < 1:2043088/151‑1 (MQ=255) cTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTatc > 1:2388366/1‑151 (MQ=255) aggCCGTTGCATATCCCCAGAAAAAGTCCGTCTCTCTTTTAAAGAACCCCCATTCCCGCATCTTTTCCCCTT‑GA‑ATTTCAAACCGCGGTGGAAAAAATTTTT‑CCTGACCCGTCGGGCACACCACCGCCGCTGAACCCTCCGGGTAtcatca < 1:1843048/149‑1 (MQ=255) ggCCGTTGCATATCCCCAGAATAAGTCCGTCTCTCTTTTAAAGAGGCCTCATTACCGCATTTTTTACCCTT‑GG‑ATTTCAAAACGCCGGGGCAATAAATTTT‑CCTGAACCGTGGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATcac < 1:797697/150‑1 (MQ=255) aGCCGTTGCATATCCCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTCCCGCATCTTTTCCCCTT‑GG‑ATTTCTAACCGCCGTGGCAATAAATTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATcac < 1:1308245/151‑1 (MQ=255) gCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATcaca > 1:1794692/1‑151 (MQ=255) ccGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACaa > 1:1932195/1‑151 (MQ=255) ttGCATATCCCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATCCCCGCTTCTTTTCCCCTT‑GG‑ATTTCTAACCGCCGGGGCAATAAATTTT‑CCTGAACCGCCGGGTTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAAttt < 1:1448911/151‑1 (MQ=255) tGCATATCCCCAGCATAAGTCCGCCTCTCTCTTTAAGAAGCCTCATTCCCGCATCTTTTCCCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTg < 1:1894841/151‑1 (MQ=255) gacatttccccAGAATAGGTCCTTCTCTCTCTTAAAGAAGCCTCATTCCCGCTTCTTTTACCTTG‑GG‑ATTTCTAAGCGCGGGGGCAATAATTTTT‑CCTGAACCGCCGGGCTCATCACCGCCGCTGAGCCCTCCGGGTATCATCACAATTTg < 1:3670717/143‑1 (MQ=255) attataCCCAGCAAAGGCCCGTCTCCCTTTTTAAGAGGCCTCATTCCCGCATCTTTT‑CCCTTAGG‑ATTGCTAAACGCCTGGGAAATAAATTTT‑CCTGACCCGTGGGGATCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCg < 1:3702059/149‑1 (MQ=255) atatACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGa > 1:2136370/1‑151 (MQ=255) atatACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAACTTGCGa > 1:2640865/1‑151 (MQ=255) tatccccAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTCCCGCATCTTTTCCCCTG‑GG‑ATTTCTAACCGCCGGGGCAATAATTTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGaa < 1:1840809/147‑1 (MQ=255) ccccAGCATAAGTCCGTCTCTCTCTTTAATAGGCCTCATTACCGCATTTTTTTCCCGA‑GA‑ATTTCTAAACCCCGTGGCA‑TAAATTTTTCCTAATCCGTCGGGTTCACTTCCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTg < 1:2879044/150‑1 (MQ=255) cAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCa > 1:285337/1‑151 (MQ=255) gCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAAt > 1:1921736/1‑151 (MQ=255) taactccttctctctcTTAAAGAGCCCTCATTCCCCCATCTTTTCCCCTT‑GG‑TTTTCTAACCCCCGTGCCAATAATTTTT‑CCTAACCCGCCGGCCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCt < 1:1902900/143‑1 (MQ=255) tAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCTTCTTTT‑CCCTT‑GGGATTTCTAACCGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCt < 1:1654431/151‑1 (MQ=255) aaGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCtt > 1:3083313/1‑151 (MQ=255) gtcgttctctcttTTTAAGAGCCCTCTTTCCCGCATTTTTTCCCCTT‑GG‑ATTTCTAACCGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCtttt < 1:219865/146‑1 (MQ=255) gTCCGTCTCTTTCTTTAAAAAGCCTCATTACCGCTTCTTTTCCCCTT‑GG‑TTTTCTAACCGCCGTGGCAAAAAATTTT‑CCTGACCCGTCGGTCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCtttt < 1:3213708/151‑1 (MQ=255) ccccGTCTCTCTCTTAAAGAACCCTCATTCCCCCATCTTTTACCCTG‑GG‑ATTTCTACCCGCCGTGGCAATAATTTTT‑CCTAACCCGTGGGTCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCtttt < 1:1080021/149‑1 (MQ=255) cccttctctctcTTTAAGACGCCTATTTACCGCATTTTTTCCCCTT‑GT‑TTTTCTAAACGCCGTGGCAAAAAATTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCttttt < 1:4077678/147‑1 (MQ=255) cccGTCTCTCTCTTTAAGAAGCCTCATTCCCCCATCTTTTCCCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGACCCGTCGGCCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCttttt < 1:2659693/150‑1 (MQ=255) ccccctctctctTAAAGAACCCTCATTCCCCCTTTTTTTCCCCTG‑GT‑TTTTCAAAACCCGGGGGCAAAAAATTTT‑CCTGACCCGGGGGGCTCAACACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTg < 1:2967241/147‑1 (MQ=255) tctctctcTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCa > 1:116349/1‑151 (MQ=255) ctctctttTAAAGAAGCCTCATTCCCGCATCTTTTCCCCTG‑GG‑TTTTCTAACCGCCGGGGCAATAAATTTT‑CCTGACCCGCCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCAt < 1:272441/151‑1 (MQ=255) tctTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTccc > 1:3327197/1‑151 (MQ=255) ttttAAGAAGCCTCATTCCCGCATCTTTTCCCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCGGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCt < 1:3482377/150‑1 (MQ=255) tttAAGAAGCCTCATTCCCCCTTCTTTTCCCCTT‑GG‑TTTTCTAAACGCCGTGGCAATAAATTTC‑CCTGACCCTTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCtt < 1:1235564/151‑1 (MQ=255) tttAAGAAGCCTAATTCCCGCTTTTTTTCCCCTT‑GG‑TTTTCTAACCGCCGGGGCAATAATTTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCtt < 1:2394383/151‑1 (MQ=255) ttAAGAAGCCTCATTCCCTTATTTTTTGCCCTT‑GG‑ATTTCGAAACGCCGGGGAAATAATTTTT‑CCAGCCCCGTCGGGCTAATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATCTCCCTTa < 1:535296/151‑1 (MQ=255) tAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTAt > 1:3083476/1‑151 (MQ=255) aagaagCCTCATTCCCGCATCTTTTCCCCTT‑GG‑ATTTTTAACCGCCGTGGAAATAAATTTT‑CCTGACCCGTCGGGCTCATCCCCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATg < 1:1504490/151‑1 (MQ=255) cccTCATTCCCGCATCTTTTCCCCTT‑GG‑TTTTCTAAGCGCCGTGGCAATAAATTTC‑CCTAACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTc < 1:1333588/150‑1 (MQ=255) ccTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCa > 1:3168644/1‑151 (MQ=255) cATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCt > 1:2112557/1‑151 (MQ=255) cccGCATCTTTTCCCCTT‑GG‑ATTTCTAAACGCCGGGGCAATAAATTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTAttt < 1:504798/150‑1 (MQ=255) aCCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTAttt > 1:71074/1‑151 (MQ=255) ccGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTc > 1:1857113/1‑151 (MQ=255) ccGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTc > 1:3882273/1‑151 (MQ=255) cATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCt > 1:1122533/1‑151 (MQ=255) aTCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGTTTCATCTATTTCGCTc > 1:877974/1‑151 (MQ=255) tCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCg > 1:3842433/1‑151 (MQ=255) aCCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTaa > 1:166519/1‑151 (MQ=255) cccTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAg < 1:2117607/151‑1 (MQ=255) ccTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAgg > 1:2610197/1‑151 (MQ=255) ccTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAgg > 1:2499645/1‑151 (MQ=255) ccTT‑GG‑ATTTCAAAACCCCGGGGCAAAAATTTTT‑CCTGACCCGTGGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAgg < 1:1890326/151‑1 (MQ=255) ttt‑GG‑TTTTCTAAACGCGGTGGCAATAATTTTT‑CCGGACCCGTCGGGCTAATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGt < 1:4241013/150‑1 (MQ=255) tt‑GG‑TTTTCTAAACGCGGTGGCAATAAATTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGtt < 1:1971211/151‑1 (MQ=255) tt‑GG‑ATTACTAAACGCCGAGGCAATAAATTAT‑CCTGAACCATCGGGCTCATCACCGCCGCTGAACCCGCCGGGCATCATCACAATTTGCGAATTGACAATTCTTTTTGCCATGTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGtt > 1:197242/1‑151 (MQ=255) gg‑ATTTCAAACCGCCGTGGCAAAAATTTTT‑CCGGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGtttt < 1:1953928/151‑1 (MQ=255) g‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGttttt < 1:2151283/151‑1 (MQ=255) aTTTCTAAACGCCGTGGCAATAATTTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTta < 1:2486775/151‑1 (MQ=255) tttCTAACCGCCGGGGCAATAATTTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTtaa < 1:2057436/151‑1 (MQ=255) tttCTAAACGCCGCGGCAATAAATTTT‑CCGTCACCGTCGGGCTCATCCCCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTtaa < 1:2225687/151‑1 (MQ=255) tCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTtaata > 1:133433/1‑151 (MQ=255) caaaccGCCGTGGCAAAAATTTTT‑CCTGACCCTCCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTtaataa < 1:62422/146‑1 (MQ=255) tAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAAc > 1:2687115/1‑151 (MQ=255) tAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAAc > 1:2530953/1‑151 (MQ=255) aaaccGCCGGGGCAATAATTTTT‑CCTGACCCGCCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAAc < 1:3873072/147‑1 (MQ=255) aaaCGCCGTGGCAATAATTTTT‑CCTAAACCGTCGGCCTCTTCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACg < 1:1591120/151‑1 (MQ=255) gCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCa > 1:3607947/1‑151 (MQ=255) gCCGTGGAAATAAATTTT‑CCTGACCCGTCGGTCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCa < 1:3938374/151‑1 (MQ=255) gaaaaaaTTTT‑CCCTAGCCGTCGGGCTAATCCCCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTccgc < 1:3238368/147‑3 (MQ=255) cAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTATCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTccac > 1:3196025/1‑151 (MQ=255) aaaaaTTTT‑CCTGCACCGTCGGGCTCACCCCCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTccacca < 1:2169684/149‑1 (MQ=255) aaaTTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTCCaccacc > 1:1562403/1‑151 (MQ=255) aTTTT‑CCTGACCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTCCACCAcccc < 1:2235586/151‑1 (MQ=255) aTTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTCCACCAcccc > 1:1054432/1‑151 (MQ=255) tt‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTCCACCACCccgcc > 1:3486605/1‑151 (MQ=255) tt‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTCCACCACCccgcc > 1:1274418/1‑151 (MQ=255) ccTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTCCACCACCCCGCCgg > 1:3044713/1‑151 (MQ=255) tGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTCCACCACCCCGCCGGcc > 1:3787543/1‑151 (MQ=255) tGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTCCACCACCCCGCCGGcc > 1:1719568/1‑151 (MQ=255) gAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTCCACCACCCCGCCGGCCt > 1:2708068/1‑151 (MQ=255) aCCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTCCACCACCCCGCCGGCCttt > 1:1817293/1‑151 (MQ=255) | GATTTCACCATAAGGTACAAGTCCAAGCTTTATAAGAGCCTGGAAGCCGTTGCATATACCCAGCATAAGTCCGTCTCTCTCTTTAAGAAGCCTCATTACCGCATCTTTTACCCTT‑GG‑ATTTCTAAACGCCGTGGCAATAAATTTT‑CCTGAACCGTCGGGCTCATCACCGCCGCTGAACCCTCCGGGTATCATCACAATTTGCGAATTGTCAATTCTTTTTGCCATTTCCCTTATGGATTCATCTATTTCGCTCGGAGTAAGGTTTTTAATAACGAGCATGTCCACCACCCCGCCGGCCTTT > CP002416/1970187‑1970487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |