Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0024161,568,1150TG30.0% 286.7 / 25.9 141F199V (TTC→GTC) Clo1313_1323DNA primase
Reads supporting (aligned to +/- strand):  ref base T (32/66);  new base G (42/0);  total (75/66)
Fisher's exact test for biased strand distribution p-value = 9.57e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 150 total aligned reads displayed.

GAAGCATAGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTAAACT  >  CP002416/1567966‑1568265
                                                                                                                                                      |                                                                                                                                                           
  aGCATAGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCa                                                                                                                                                          <  1:2526791/151‑1 (MQ=255)
     aTAGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCagag                                                                                                                                                       <  1:1981640/151‑1 (MQ=255)
     aTAGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGAGGTTATTATGACAGG‑TTCagag                                                                                                                                                       <  1:1166396/151‑1 (MQ=255)
       aGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGt                                                                                                                                                     <  1:3719536/151‑1 (MQ=255)
          cAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGa                                                                                                                                                  <  1:846778/151‑1 (MQ=255)
          cAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGa                                                                                                                                                  >  1:3613000/1‑151 (MQ=255)
           aGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGaa                                                                                                                                                 >  1:1259213/1‑151 (MQ=255)
               aaTTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATTACAGG‑TTCAGAGGTAGAA‑atat                                                                                                                                            >  1:2364323/1‑151 (MQ=255)
                 tttGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTata‑t                                                                                                                                         <  1:3904956/151‑1 (MQ=255)
                    ggTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTTTTAAAGG‑TTCAGAGGTGGAA‑TTATA‑TTTc                                                                                                                                      >  1:989997/1‑151 (MQ=255)
                     gTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGGAGAA‑ATATA‑ttttc                                                                                                                                     >  1:1068348/1‑149 (MQ=255)
                         aGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATTACAGGGTTC‑GAGGTAGAA‑ATATA‑TTTcccaaa                                                                                                                                 >  1:981499/1‑147 (MQ=255)
                            cTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATAttt                                                                                                                              <  1:1528251/151‑1 (MQ=255)
                            cTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCCGAGGGAGGA‑TTATA‑TTTTCAATAttt                                                                                                                              >  1:1783703/1‑151 (MQ=255)
                             tATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTg                                                                                                                             <  1:3800134/151‑1 (MQ=255)
                                 cGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑ttt                                                                                                                        <  1:4171507/151‑1 (MQ=255)
                                 cGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAA‑TTATA‑TTTCCAATATTTGt‑ttt                                                                                                                        >  1:388872/1‑151 (MQ=255)
                                  gCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTa                                                                                                                       <  1:3047870/151‑1 (MQ=255)
                                   ccGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATTAGAGG‑GTTAGGGGTAGAA‑ATATA‑TTTCCCATAttttttttta                                                                                                                       >  1:2165688/1‑144 (MQ=255)
                                    cGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTTAGAGGGAGAA‑TTATA‑ATTCCAATAattta‑ttttag                                                                                                                     >  1:244631/1‑148 (MQ=255)
                                     ggAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAA‑ATATA‑TTTCCAATATTTGA‑TTTA‑Agg                                                                                                                   >  1:2970179/1‑151 (MQ=255)
                                       aagaaTGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGGAGAA‑TTATA‑TTTCCCAAATTTGA‑TTTA‑Agggg                                                                                                                 >  1:3494755/1‑151 (MQ=255)
                                       aagaaTGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGCGGTAGGA‑ATATA‑TTTCCAATATTTTA‑TTTT‑Agggg                                                                                                                 >  1:3019323/1‑151 (MQ=255)
                                       aagaaTGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAA‑TTATA‑TTTCCAATATTTTA‑TTTT‑Agggg                                                                                                                 >  1:179339/1‑151 (MQ=255)
                                        agtaagggACGCGCTATACAAACATTTAAGGAAAAAAGGTTGTGATGATGAAGTGCTTTTAGACAGCGGACTGATTGTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTGGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGa                                                                                                                <  1:3825678/146‑1 (MQ=255)
                                         gaaTGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGATATTTTGACAGG‑GTCATAGGTAGAAATTTTA‑TTTCCAATTTTTTT‑TTTA‑GGGGGa                                                                                                                >  1:3858708/1‑151 (MQ=255)
                                            tGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTTCAATATTTTA‑TTTA‑AGGGGAAATg                                                                                                            >  1:1146797/1‑151 (MQ=255)
                                            tGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATg                                                                                                            <  1:741440/151‑1 (MQ=255)
                                             gggACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGt                                                                                                           <  1:85408/151‑1 (MQ=255)
                                             gggACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGt                                                                                                           <  1:1676905/151‑1 (MQ=255)
                                              ggACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACCGG‑GTCAGAGGGAGAA‑ATATA‑TTTTCAATATTTGG‑TTTA‑AGGGGGAATgga                                                                                                          >  1:327537/1‑149 (MQ=255)
                                              ggACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTa                                                                                                          <  1:3330475/151‑1 (MQ=255)
                                              ggACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTa                                                                                                          <  1:4006425/151‑1 (MQ=255)
                                                  gcgcTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTg                                                                                                      <  1:2423464/151‑1 (MQ=255)
                                                  gcgcTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTg                                                                                                      <  1:1588625/151‑1 (MQ=255)
                                                    gcTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGt                                                                                                    <  1:2806020/151‑1 (MQ=255)
                                                     cTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTGACAGG‑TTCAGAGGGAGAA‑TTATA‑TTTTCAATATTTGA‑TTTA‑AGGGGAAATGTAATTgggt                                                                                                   >  1:3416588/1‑149 (MQ=255)
                                                      tataCAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGAA‑TTATA‑TTTTCCATATTTTT‑TTTT‑AGGGGGAATGTAATTgggtt                                                                                                  >  1:2287788/1‑148 (MQ=255)
                                                         aCAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCTGAGGTAGAA‑TTATA‑TTTTCAATATTTGA‑TTTA‑AGGGGGAATGTAATTGGGTTtgg                                                                                               >  1:246477/1‑151 (MQ=255)
                                                           aaTCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGATTtggtg                                                                                             <  1:2531601/151‑1 (MQ=255)
                                                               aTTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAag                                                                                         <  1:1663917/151‑1 (MQ=255)
                                                                   aaGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTTACAGG‑TTCCGAGGGAGAA‑TTATA‑TTTCCAATATTTTT‑TTTT‑AGGGGGAATGGAATTGGTTTTGGGGGAAGAGTc                                                                                     >  1:1764212/1‑151 (MQ=255)
                                                                   aaGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATTACAGGGTTTA‑AGGTAGAA‑ATATA‑TTTCCAGTATTTGA‑TTTTTAGGGGGA‑TGTAATTTGGTTTGGTGGAAGAGtt                                                                                     >  1:1921449/1‑150 (MQ=255)
                                                                   aaGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGGTATTAAGAAAGG‑ATAAGAGGTAGAA‑GTATA‑ATTCCAATATTTGAATTTA‑AGGGGAA‑TGGAATAGGGTTTGGTGGAagaggc                                                                                     >  1:3717946/1‑149 (MQ=255)
                                                                     ggAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCt                                                                                   <  1:2891351/151‑1 (MQ=255)
                                                                      gAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACCGG‑GTCAGAGGGAGAA‑TTATA‑TTTCCAATATTTTA‑TTTT‑AGGGGGAATGTAATTGGTTTTGGGGGGAGAGTCCTg                                                                                  >  1:1414361/1‑151 (MQ=255)
                                                                      gAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTg                                                                                  <  1:3254478/151‑1 (MQ=255)
                                                                      gAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTg                                                                                  <  1:2346830/151‑1 (MQ=255)
                                                                      gAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTg                                                                                  <  1:2116665/151‑1 (MQ=255)
                                                                       aaaaaaGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTGACAGG‑TTCAGAGGGAGAA‑TTATA‑TTTTCAATATTTGA‑TTTT‑AGGGGGAATGTAATTGGTTTTGGTGGAAGAGTCCTgg                                                                                 >  1:2813934/1‑151 (MQ=255)
                                                                        aaaaaGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTTTTAAAGG‑TTTCGAGGTAGAA‑TTATA‑TTTCCAATATTTTA‑TTTT‑AGGGGGAATGTAATTTGTTTTTGTGGGagagagctggg                                                                                >  1:2386285/1‑144 (MQ=255)
                                                                           aaGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATaa                                                                             <  1:3507493/151‑1 (MQ=255)
                                                                            aGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATAGTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAAt                                                                            <  1:2385464/151‑1 (MQ=255)
                                                                             ggTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTGACAGG‑GTCAGAGGGAGAA‑TTATA‑TTTTCAATATTTGA‑TTTA‑AGGGGGAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAAtt                                                                           >  1:1321781/1‑151 (MQ=255)
                                                                             ggTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTTA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAAtt                                                                           >  1:261324/1‑151 (MQ=255)
                                                                              gTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTc                                                                          <  1:4968/151‑1 (MQ=255)
                                                                              gTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGAA‑TTATA‑TTTTCAATATTTGA‑TTTT‑AGGGGGAAAGTAATTGGTTTTGGGGGAAGAGTCCTGGGTAATTc                                                                          >  1:436601/1‑151 (MQ=255)
                                                                                tATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGAA‑TTATA‑TTTCCCATATTTTA‑TTTA‑AGGGGGAATGGAATTGGGTTTGGGGGAAGAGGCCTGGGTAAtttta                                                                        >  1:1625755/1‑148 (MQ=255)
                                                                                 atgatgatgAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGAA‑ATATT‑TTTCCCATATTTTA‑TTTT‑AGGGGAAATGTAATTGGTTTTGGTGGGAGAGTCCTGGATAATTCTAc                                                                       >  1:3075638/1‑151 (MQ=255)
                                                                                  tgatgatgaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAA‑TTATA‑TTTTCAATATTTTA‑TTTA‑AGGGGAAATGGAATTGGTTTTGGGGGAAGAGTCCTGGATAATTCTACt                                                                      >  1:1239847/1‑151 (MQ=255)
                                                                                       atgaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTGACAGG‑GTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGGAATGTAATTGGTTTTGGGGGAAGAGTCCTGGATAATTTTACTCC‑aaa                                                                >  1:4174164/1‑151 (MQ=255)
                                                                                       atgaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATAGCTGG‑TTCTAAGGTAGAA‑TTATAATTTTCA‑TATTTTT‑TTTT‑AGGGGGTTTGGAATTGGTTTTGGTGGAAGAATCCTGGGTAATTCTATTcccaa                                                                 >  1:2133632/1‑148 (MQ=255)
                                                                                        tgaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTT‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAg                                                               >  1:2029534/1‑151 (MQ=255)
                                                                                             tACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTatat                                                          <  1:1703515/151‑1 (MQ=255)
                                                                                               cTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTATGACAGG‑GTCAGAGGGAGAA‑TTATA‑TTTCCCATATTTTA‑TTTA‑AGGGGAAATGTAAATGGGTTTTGTGGAAGAGTCCTGGGTAATTTTACTCC‑AAAGAATATGa                                                        >  1:251372/1‑151 (MQ=255)
                                                                                               cTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGa                                                        <  1:1754004/151‑1 (MQ=255)
                                                                                                  ttAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTTAGAGG‑TTCAGAGGTAGAA‑TTTAA‑TTTTCCATATTTTA‑TTTA‑AAGGGAAATGTAATTTGTTTTGGTGGAAAAGTCCTGGATAAATTTACTCC‑CAAGTATATGAACt                                                     >  1:4037019/1‑151 (MQ=255)
                                                                                                  ttAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACt                                                     <  1:2603695/151‑1 (MQ=255)
                                                                                                   tAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATCACAGG‑TTCAGAGGTAGAA‑TTATA‑ATTTTAAAATTTTA‑TTTA‑TGGGGAAATGTTATTTGGTTTGGTTGGAGAGTGCTGGATAATTTTACTCC‑CAAGTATATGAACTc                                                    >  1:3430009/1‑151 (MQ=255)
                                                                                                     gACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTccc                                                  <  1:1307325/151‑1 (MQ=255)
                                                                                                       cAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCg                                                <  1:3659224/151‑1 (MQ=255)
                                                                                                        aGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAAAGTAATTGGTTTTGGGGGAAGAGTCCTGGGTAATTCTACTCC‑AAAGTATATGAACTCCCCgg                                               >  1:2319310/1‑151 (MQ=255)
                                                                                                          cGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATTACAGG‑GTCAGAGGGAGAA‑TTATA‑TTTTCAATATTTTA‑TTTT‑AGGGGGAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGaa                                             >  1:3945454/1‑151 (MQ=255)
                                                                                                          cGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTTCAATATTTTA‑TTTA‑AGGGGGAAAGTAATTGGTTTTGGTGGAAGAGGCCTGGATAATTCTAATCCCAAAG‑ATATGAAATcccccgga                                             >  1:4265187/1‑147 (MQ=255)
                                                                                                           ggACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGaaa                                            <  1:2162653/151‑1 (MQ=255)
                                                                                                             aCTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTTCAATATTTGT‑TTTA‑AGGGGGAATGTAATTGGGTTTGGTGGGAGAGACCTGGATAATTCTACTCC‑AAAGTATATTAACTCCCCGGAAACg                                          >  1:408878/1‑151 (MQ=255)
                                                                                                             aCTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACg                                          <  1:2747364/151‑1 (MQ=255)
                                                                                                              cTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGGAATGGAATTGGGTTTGGTGGAAGAGGCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGt                                         >  1:2904983/1‑151 (MQ=255)
                                                                                                               tGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGtt                                        <  1:3098026/151‑1 (MQ=255)
                                                                                                                  ttttAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTTAGAGGGAGAA‑TTATA‑TTTTCAATATTTTT‑TTTA‑AGGGGGAATGGAATTGGTTTTGGTGGAAGAGTCCTGGATAATTTTACTTC‑AAAGTATATGAACTCCCCGGGAAAGTTGGt                                     >  1:1435687/1‑151 (MQ=255)
                                                                                                                   tttAAAAGGAAAAAACGGCGGTTATTTTGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTTCCATATTTTA‑TTTA‑AGGGGGAATGGAATTGGGTTTGGTGGAAGAGGCCTGGGTAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGtt                                    >  1:3330129/1‑151 (MQ=255)
                                                                                                                   tttAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGtt                                    <  1:189421/151‑1 (MQ=255)
                                                                                                                    ttAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGttt                                   <  1:1369138/151‑1 (MQ=255)
                                                                                                                         aGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAAt                              <  1:388871/151‑1 (MQ=255)
                                                                                                                          ggAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAA‑TTATA‑TTTTCAATATTTGA‑TTTA‑AGGGGGAATGTAATTGGGTTTGGTGGAAGAGGCCTGGATAATTCTACTCC‑AAAGGATATGAAATCCCCGGAAACGTTGGGTTAAAATa                             >  1:1019661/1‑151 (MQ=255)
                                                                                                                               aaaCGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGGAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAgg                        >  1:3789236/1‑151 (MQ=255)
                                                                                                                                  cggcggTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGaaa                     <  1:4109051/151‑1 (MQ=255)
                                                                                                                                     cggTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAAt                  >  1:2691001/1‑151 (MQ=255)
                                                                                                                                      ggTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAAtt                 <  1:4015108/151‑1 (MQ=255)
                                                                                                                                      ggTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAAtt                 >  1:2035107/1‑151 (MQ=255)
                                                                                                                                           ttatGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTAc            >  1:3908954/1‑151 (MQ=255)
                                                                                                                                           ttatGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTAc            <  1:3124875/151‑1 (MQ=255)
                                                                                                                                            tatGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACg           <  1:4289703/151‑1 (MQ=255)
                                                                                                                                            tatGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACg           >  1:4221522/1‑151 (MQ=255)
                                                                                                                                            tatGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACg           <  1:3174035/151‑1 (MQ=255)
                                                                                                                                            tatGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACg           >  1:3087059/1‑151 (MQ=255)
                                                                                                                                              tGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGt         >  1:1766782/1‑151 (MQ=255)
                                                                                                                                                aCAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGttt       <  1:748593/151‑1 (MQ=255)
                                                                                                                                                 cAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTa      <  1:135924/151‑1 (MQ=255)
                                                                                                                                                      ttCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTAAACt  <  1:569330/151‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                           
GAAGCATAGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAA‑TTATA‑TTTCCAATATTTGA‑TTTA‑AGGGGAAATGTAATTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCC‑AAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTAAACT  >  CP002416/1567966‑1568265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑