New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP002416 = 268468249 (0.270)166 (0.940) 115/294 0.6 77.6% intergenic (‑414/‑17) Clo1313_2275/Clo1313_2276 DNA adenine methylase/protein of unknown function DUF125 transmembrane
?CP002416 3150344 = NA (NA)intergenic (‑1888/+124) Clo1313_2684/Clo1313_2686 hypothetical protein/transposase IS200‑family protein

Only 100 of 208 total aligned reads displayed.

AATTCTGACTTGTAATCCACCACAGATTTCTTGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTACTC  >  CP002416/3150194‑3150490
                                                                                                                                                      |                                                                                                                                                  
aaTTCTAACTTGTAATCCACCTCAGATTTCTTGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCTATTTTATTAACACAAAATTATCATTCCAAAGCTTGCAATCCGTGGTTGCTGTATAATc                                                                                                                                                    <  1:4224426/151‑1 (MQ=14)
      gACTTGTAATCCACCACAGATTTCTTGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAacc                                                                                                                                              >  1:395094/1‑151 (MQ=255)
       aCTTGTAATCCACCACAGATTTCTTGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATCCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAacca                                                                                                                                             >  1:1404147/1‑151 (MQ=255)
             aaTCCACCACAGATTTCTTGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCt                                                                                                                                       >  1:3201557/1‑151 (MQ=255)
             aaTCCACCACAGATTTCTTGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCt                                                                                                                                       >  1:2084875/1‑151 (MQ=255)
              aTCCACCACAGATTTCTTGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTc                                                                                                                                      <  1:4127155/151‑1 (MQ=255)
                 caccacAGATTTCTTGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGc                                                                                                                                   >  1:773436/1‑151 (MQ=255)
                    cacaGATTTCTTGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCgg                                                                                                                                >  1:2398212/1‑151 (MQ=255)
                     acaGATTTCTTGACTTCTTTTATCAATCCGCGCATTTGGTTGATTTTTCCTGCTTATAACGTTATAGTTGTCATTTTATTCACTCAAAATTATCATGCCAATGCTTGCAATTCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCggt                                                                                                                               <  1:3322553/151‑1 (MQ=17)
                      gtgATTTCTTTACTTCTTTTACCAATCCGGGCATTTGGTTGATTTTACCGGCATATATCGTAATAGTTGCCTTTTTATTAACACAAAATTAGCATTCCAATGCTTGCAATCCGTGGTTTTTTTATAATCATAACCAGCGGCTCAGCCggtg                                                                                                                              <  1:3802814/149‑1 (MQ=17)
                      caGATTTCTTGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCggtg                                                                                                                              <  1:1225252/151‑1 (MQ=255)
                       aGATTTCTTGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCggtgg                                                                                                                             <  1:3072966/151‑1 (MQ=255)
                         aTTTCTTGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGtt                                                                                                                           <  1:3278890/151‑1 (MQ=255)
                          tttCTTGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGttt                                                                                                                          <  1:2126862/151‑1 (MQ=255)
                          tttCTTGACTTATTTTATCAATCCGGGCATTTGGCTGATTTTTCCGGCATATTACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGAGGTTGCTTTATAATCATAACCACCGCCTCAGCCGTTGGttt                                                                                                                          >  1:1932141/1‑151 (MQ=17)
                              ttGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGctc                                                                                                                      <  1:4186790/151‑1 (MQ=255)
                              ttGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGctc                                                                                                                      <  1:1102951/151‑1 (MQ=255)
                                 aCTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAg                                                                                                                   <  1:3755297/151‑1 (MQ=255)
                                    tcttTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGccc                                                                                                                >  1:1637146/1‑151 (MQ=255)
                                      ttttATCAATCCGGGCCTTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATGTTTTTACTTCAGAAT‑ATCATTCCACTGCTTGCAATCCGCGGTTGCTTTATAATAATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCatat                                                                                                             >  1:2914043/1‑151 (MQ=18)
                                       tttATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCtat                                                                                                             <  1:1783123/151‑1 (MQ=255)
                                        ctcttccgatctgCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCTCCGGCTCAGCCGGTGGTTTGCTCTAGCCCgata                                                                                                            <  1:4236534/139‑1 (MQ=18)
                                         tATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATaa                                                                                                           <  1:2713975/151‑1 (MQ=255)
                                           tCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAgg                                                                                                         <  1:1089487/151‑1 (MQ=255)
                                            cAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAggg                                                                                                        >  1:2688485/1‑151 (MQ=255)
                                            cAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAggg                                                                                                        >  1:1159131/1‑151 (MQ=255)
                                            cAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCGATAAggg                                                                                                        <  1:555265/151‑1 (MQ=255)
                                               tCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCAt                                                                                                     <  1:1334406/151‑1 (MQ=255)
                                                ccGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTTAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATg                                                                                                    >  1:1522612/1‑151 (MQ=255)
                                                 cGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGATTGCTCTAGCCCTATAAGGGCATgg                                                                                                   >  1:619075/1‑151 (MQ=255)
                                                      aTTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCtt                                                                                              <  1:511489/151‑1 (MQ=255)
                                                       tttGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTg                                                                                             <  1:1441596/151‑1 (MQ=255)
                                                        ttGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGc                                                                                            >  1:2052735/1‑151 (MQ=255)
                                                            ttGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCagag                                                                                        <  1:2941589/151‑1 (MQ=255)
                                                            ttGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCagag                                                                                        <  1:2445608/151‑1 (MQ=255)
                                                             tGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGt                                                                                       >  1:1812353/1‑151 (MQ=255)
                                                             tGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGt                                                                                       <  1:2843923/151‑1 (MQ=255)
                                                              gATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTc                                                                                      >  1:4294749/1‑151 (MQ=255)
                                                                  tttCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTaa                                                                                  >  1:686723/1‑151 (MQ=255)
                                                                    tCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGa                                                                                <  1:848771/151‑1 (MQ=255)
                                                                    tCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGCTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGa                                                                                >  1:882415/1‑151 (MQ=255)
                                                                     ccGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGAc                                                                               <  1:2281279/151‑1 (MQ=255)
                                                                     ccGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGAc                                                                               >  1:1662306/1‑151 (MQ=255)
                                                                        gCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGAcgcg                                                                            <  1:3865874/151‑1 (MQ=255)
                                                                         cATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGt                                                                           <  1:3821961/151‑1 (MQ=255)
                                                                               aCGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATg                                                                     <  1:40659/151‑1 (MQ=255)
                                                                                cGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATgg                                                                    >  1:1148637/1‑151 (MQ=255)
                                                                                 gTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGt                                                                   >  1:2057947/1‑151 (MQ=255)
                                                                                  ttATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGtt                                                                  >  1:489748/1‑151 (MQ=255)
                                                                                   tataGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTc                                                                 <  1:1290774/151‑1 (MQ=255)
                                                                                   tataGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTc                                                                 >  1:197563/1‑151 (MQ=255)
                                                                                   tataGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTc                                                                 <  1:3107159/151‑1 (MQ=255)
                                                                                   tataGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTc                                                                 <  1:1773000/151‑1 (MQ=255)
                                                                                       gTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCa                                                             >  1:427716/1‑151 (MQ=255)
                                                                                       gTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCa                                                             <  1:3790519/151‑1 (MQ=255)
                                                                                       gTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCa                                                             >  1:2322040/1‑151 (MQ=255)
                                                                                       gTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCa                                                             >  1:1041268/1‑151 (MQ=255)
                                                                                       gTTGCCATTTTATAAACTAAAAATTATCATTCCAATGCTAGCAATCCGTGGTTGCTTTACAATCATAACCACCGTCTCAGCCGGTGGTTTGCTCTAGCCCTATAGGGGCATGGTCCTTGCAGAGACTTAAGACGCGTTAAATGGTTCGcat                                                             <  1:2214779/151‑3 (MQ=18)
                                                                                        ttGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCaa                                                            <  1:2259694/151‑1 (MQ=255)
                                                                                         tGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAAc                                                           <  1:4017472/151‑1 (MQ=255)
                                                                                          gCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAAcc                                                          >  1:3660330/1‑151 (MQ=255)
                                                                                            cATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGc                                                        >  1:539180/1‑151 (MQ=255)
                                                                                            cATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGc                                                        >  1:2505776/1‑151 (MQ=255)
                                                                                              ttttATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCat                                                      >  1:393685/1‑151 (MQ=255)
                                                                                                ttattaACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCatat                                                    <  1:4094036/151‑1 (MQ=255)
                                                                                                  attaACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATAttc                                                  >  1:2678055/1‑151 (MQ=255)
                                                                                                   ttaACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATAttct                                                 <  1:718290/151‑1 (MQ=255)
                                                                                                    taACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATAttctt                                                <  1:4165656/151‑1 (MQ=255)
                                                                                                     aaCTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATAttcttc                                               >  1:1551507/1‑151 (MQ=255)
                                                                                                     aaCTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATAttcttc                                               <  1:3345250/151‑1 (MQ=255)
                                                                                                      aCTCAAAATTATCATTCCAATGCTTGCAATCCGTGGATGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATtcttct                                              >  1:2615726/1‑151 (MQ=255)
                                                                                                        tCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCa                                            <  1:1256147/151‑1 (MQ=255)
                                                                                                         cAAAATTGTCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCaa                                           >  1:517388/1‑151 (MQ=255)
                                                                                                         cAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCaa                                           >  1:657441/1‑151 (MQ=255)
                                                                                                           aaaTTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGc                                         >  1:3479002/1‑151 (MQ=255)
                                                                                                             aTTATCATTCCAATGCTTGCAAACCGTGGTTGCTTTATAAAAAGATGCACCGACTCTGCCGGTGGTTTGCTCTAGACCTATAAGGGCATGGTCCTTGCAGATTCTTGAGACGAGTTGAATGGTTCGTCAACCGCATATGCTTCTCAAGcca                                       <  1:3899718/151‑1 (MQ=14)
                                                                                                              ttATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGccac                                      >  1:186676/1‑151 (MQ=255)
                                                                                                                aTCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGccacca                                    <  1:2995563/151‑1 (MQ=255)
                                                                                                                  cATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACt                                  >  1:2376653/1‑151 (MQ=255)
                                                                                                                   aTTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTa                                 <  1:3705956/151‑1 (MQ=255)
                                                                                                                       cAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGt                             >  1:2426708/1‑151 (MQ=255)
                                                                                                                       cAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGt                             >  1:1698473/1‑151 (MQ=255)
                                                                                                                         aTGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTgg                           <  1:3648077/151‑1 (MQ=255)
                                                                                                                          tGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGt                          <  1:3023242/151‑1 (MQ=255)
                                                                                                                           gCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGtt                         <  1:2034408/151‑1 (MQ=255)
                                                                                                                           gCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGtt                         <  1:3170157/151‑1 (MQ=255)
                                                                                                                            cTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGttt                        >  1:3436686/1‑151 (MQ=255)
                                                                                                                                cAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTAtt                    >  1:4295737/1‑151 (MQ=255)
                                                                                                                                  aTCCGTGGTTTCTTTATAATCATGACCAGAGGCTCAGCCGGTGGTTGGCTCTAGCCATATAAGGGCATGGTCCTTGCAGGGTCTTAAGAGGCGTTGAATGGGTCGACTACCGCAGATTCTTCTCAAGCCACAACGAAAGTGGTTTTAtttt                  <  1:2184110/151‑1 (MQ=11)
                                                                                                                                   tCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTAttttt                 >  1:1235161/1‑151 (MQ=255)
                                                                                                                                       tGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCt             >  1:2791222/1‑151 (MQ=38)
                                                                                                                                        ggTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCtt            >  1:1750367/1‑151 (MQ=38)
                                                                                                                                        ggTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCtt            <  1:317437/151‑1 (MQ=38)
                                                                                                                                        ggTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCtt            >  1:398282/1‑151 (MQ=38)
                                                                                                                                         gTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCttt           >  1:1343521/1‑151 (MQ=37)
                                                                                                                                             cTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTtttatt       <  1:2095308/151‑1 (MQ=33)
                                                                                                                                              tttATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTtttattt      <  1:3537757/151‑1 (MQ=33)
                                                                                                                                               ttATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTtttattta     <  1:4268879/151‑1 (MQ=32)
                                                                                                                                                tataATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTAc    >  1:4036086/1‑151 (MQ=31)
                                                                                                                                                  taATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTACTc  <  1:465491/151‑1 (MQ=11)
                                                                                                                                                      |                                                                                                                                                  
AATTCTGACTTGTAATCCACCACAGATTTCTTGACTTCTTTTATCAATCCGGGCATTTGGTTGATTTTTCCGGCATATAACGTTATAGTTGCCATTTTATTAACTCAAAATTATCATTCCAATGCTTGCAATCCGTGGTTGCTTTATAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGAGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTACTC  >  CP002416/3150194‑3150490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.