| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP002416 | 2,005,747 | +A | intergenic (‑132/+47) | Clo1313_1710 ← / ← Clo1313_R0045 | transposase IS200‑family protein/tRNA‑Leu |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP002416 | 2,005,747 | 1 | . | A | 95.0% | 525.4 / 15.4 | 140 | intergenic (‑132/+47) | Clo1313_1710/Clo1313_R0045 | transposase IS200‑family protein/tRNA‑Leu |
| Reads supporting (aligned to +/- strand): ref base . (4/3); new base A (72/61); total (76/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.33e-01 | |||||||||||
Only 100 of 148 total aligned reads displayed.
CATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AA‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTATTCATCAATCA > CP002416/2005603‑2005897 | cATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCGCTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATaaaa < 1:3868745/151‑1 (MQ=9)cATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATaaaa > 1:2736370/1‑151 (MQ=14) ttATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATaaaaaa > 1:4216718/1‑151 (MQ=17) ttATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATaaaaaa < 1:2535898/151‑1 (MQ=17) ttATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATaaaaaa < 1:1123557/151‑1 (MQ=17) tCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAA‑Taaaaaaagc < 1:456345/151‑3 (MQ=2) aCGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAg > 1:3438677/1‑151 (MQ=25) aCGCATCGTGATACCTCCTATGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAGAACAAg < 1:2202939/151‑1 (MQ=255) cGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAgg > 1:2780195/1‑151 (MQ=255) cGCATCGTGATACCTCCTTTGTTTTTAATGTAGATGGCAAACCTACATTATTGTAACAAAGGTGGTTACTTTTTTCTACTCATAGAAACTGTCTCTTTAGAACCACTGGCATAGTTAGTGGTTTTCTTTAAACAATAA‑Taaaaaaagcctc > 1:3164490/1‑146 (MQ=11) aTCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTATACAA‑AAATAAAAAAACAAGGAtt > 1:4101890/1‑151 (MQ=255) aTCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGAtt < 1:4247052/151‑1 (MQ=255) aTCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGAtt < 1:2566608/151‑1 (MQ=255) aTCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGAtt > 1:4145816/1‑151 (MQ=255) cGTGATTCCGCCTTTGTTTTTAATGTATTTGGCAAACCTACATTATTGTAACAAAGGAGGTTTCTTTTTTCTGCTCATAGACACGGTCTCATTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAATCAA‑AAATAAAAAAACAAGGATTcc < 1:3900302/151‑1 (MQ=14) cGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAA‑Taaaaaaagcctcttaca < 1:672543/151‑11 (MQ=11) gTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCa > 1:1517513/1‑151 (MQ=255) tGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCAt < 1:3884231/151‑1 (MQ=255) tGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCAt < 1:80890/151‑1 (MQ=255) tGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCAt > 1:3147372/1‑151 (MQ=255) gATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCAtt < 1:3435210/151‑1 (MQ=255) aTACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTa > 1:2542223/1‑151 (MQ=255) tACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTGCTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTAt < 1:4282540/151‑1 (MQ=255) tACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTAt > 1:3999810/1‑151 (MQ=255) ctcctTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGa > 1:1059194/1‑151 (MQ=255) tcctTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGaa > 1:392896/1‑151 (MQ=255) ctTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAAt < 1:408730/151‑1 (MQ=255) ctTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAAt < 1:2369927/151‑1 (MQ=255) tttGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGTGGTTACTTTTTTATACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATc > 1:1736227/1‑151 (MQ=255) tttGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATc < 1:1401824/151‑1 (MQ=255) gTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCtt < 1:245766/151‑1 (MQ=255) ttAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGtt > 1:3455692/1‑151 (MQ=255) gTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCttt < 1:1787737/151‑1 (MQ=255) gTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCttt > 1:323444/1‑151 (MQ=255) tAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCtttt < 1:1783585/151‑1 (MQ=255) gTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTAt < 1:864845/151‑1 (MQ=255) tGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAA‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGGTTCTTTTATCt > 1:478069/1‑151 (MQ=255) tGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCt < 1:3966227/151‑1 (MQ=255) tGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCt > 1:2745569/1‑151 (MQ=255) aaaCCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTg > 1:2010651/1‑151 (MQ=255) aaCCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGc < 1:1638874/151‑1 (MQ=255) aaCCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGc > 1:2770861/1‑151 (MQ=255) ccTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCg < 1:45196/151‑1 (MQ=255) aCATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAg < 1:1482421/151‑1 (MQ=255) ttattGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGcc < 1:750536/151‑1 (MQ=255) ttattGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCAGAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGcc < 1:2454360/151‑1 (MQ=255) ttGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGa > 1:1002074/1‑151 (MQ=255) gTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGAtt < 1:2937685/151‑1 (MQ=255) tAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTc > 1:1113311/1‑151 (MQ=255) aaCAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCg < 1:849647/151‑1 (MQ=255) aaCAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCg < 1:982072/151‑1 (MQ=255) aaaGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAAc > 1:1260565/1‑151 (MQ=255) aggaggTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCg > 1:3242367/1‑151 (MQ=255) ggaggTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCgg > 1:2443789/1‑151 (MQ=255) aggTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCa > 1:1839250/1‑151 (MQ=255) gTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATg > 1:1526820/1‑151 (MQ=255) gTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATg < 1:901518/151‑1 (MQ=255) ttACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATgg > 1:1776514/1‑151 (MQ=255) cTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTAt < 1:1057831/151‑1 (MQ=255) ttttttCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTAtt > 1:1869218/1‑151 (MQ=255) ttttCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGc < 1:3461514/151‑1 (MQ=255) tttCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCt < 1:51616/151‑1 (MQ=255) ttCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTa < 1:2153140/151‑1 (MQ=255) ttCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTa < 1:1183798/151‑1 (MQ=255) tCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTAc > 1:2956554/1‑151 (MQ=255) tACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCg < 1:2079630/151‑1 (MQ=255) aCTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGc < 1:2366063/151‑1 (MQ=255) cTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCt > 1:2716785/1‑151 (MQ=255) tCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTg > 1:4111404/1‑151 (MQ=255) cATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTgg > 1:2298338/1‑151 (MQ=255) cATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTgg > 1:2933343/1‑151 (MQ=255) tAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGAt > 1:730662/1‑151 (MQ=255) tAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGAt > 1:3274785/1‑151 (MQ=255) aGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGAtt > 1:2978507/1‑151 (MQ=255) acacTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGAtttt < 1:3371917/151‑1 (MQ=255) cTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAg < 1:2415055/151‑1 (MQ=255) ctctTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCa < 1:821450/151‑1 (MQ=255) ctTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGt > 1:4295620/1‑151 (MQ=255) tAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCg > 1:3314575/1‑151 (MQ=255) aGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGt > 1:1474401/1‑151 (MQ=255) aGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGt > 1:4043725/1‑151 (MQ=255) aGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGCATTGCTACCGCTGGATTTTGAGTCCAGTGCGt > 1:4155320/1‑151 (MQ=255) gCATAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAAttt < 1:1175025/151‑1 (MQ=255) tAGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTcac > 1:3656485/1‑151 (MQ=255) aGCCAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTcacc > 1:1622069/1‑151 (MQ=255) ccAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCCTGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTcaccac > 1:491282/1‑151 (MQ=255) ccAGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTcaccac < 1:2843525/151‑1 (MQ=255) aGTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACtt < 1:1230130/151‑1 (MQ=255) gTGGTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTc > 1:1929357/1‑151 (MQ=255) gTTTTCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGc > 1:2831517/1‑151 (MQ=255) ttttCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCa > 1:1398799/1‑151 (MQ=255) ttttCTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCa > 1:583082/1‑151 (MQ=255) cTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAgat > 1:2700025/1‑149 (MQ=255) cTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGtt < 1:2574230/151‑1 (MQ=255) cTTTAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGtt > 1:3095119/1‑151 (MQ=255) tAAACAA‑AAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTAtt < 1:513143/151‑1 (MQ=255) aaacaaa‑aa‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTTCGTCTGCCAATTTCACCACTTCGGCAAGTTATtc > 1:2342374/6‑151 (MQ=255) aaacaaa‑aa‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTATtc < 1:2221969/146‑1 (MQ=255) aacaaa‑aa‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTATtca > 1:3262661/5‑151 (MQ=255) caaa‑aa‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTATtcatc > 1:1927609/3‑151 (MQ=255) | CATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAA‑AA‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTATTCATCAATCA > CP002416/2005603‑2005897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |