| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP002416 | 1,656,860 | +A | coding (199/810 nt) | Clo1313_1409 → | sporulation transcriptional activator Spo0A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP002416 | 1,656,860 | 1 | . | A | 99.5% | 744.7 / ‑4.3 | 184 | coding (199/810 nt) | Clo1313_1409 | sporulation transcriptional activator Spo0A |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base A (91/92); total (92/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.10e-01 | |||||||||||
Only 100 of 196 total aligned reads displayed.
TTTGGCGATATTTTATATGAATACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTT‑TGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTATGTTGTAAAGCCTTTCGACATG > CP002416/1656710‑1657003 | tttGGCGATATTTTATATGAATACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGtt < 1:1958322/151‑1 (MQ=255)tttGGCGATATTTTATATGAATACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGtt < 1:1157809/151‑1 (MQ=255) ggCGATATTTTATATGAATACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGttatg < 1:220108/151‑4 (MQ=255) cGATATTTTATATGAATACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGttatggg > 1:4108801/1‑146 (MQ=255) cGATATTTTATATGAATACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGttatggg < 1:3033966/151‑6 (MQ=255) atatTTTATATGAATACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGgtg < 1:410887/151‑1 (MQ=255) atatTTTATATGAATACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGgtg > 1:137041/1‑151 (MQ=255) tatTTTATATGAATACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGgtgt > 1:3058421/1‑151 (MQ=255) ttttATATGAATACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGttt > 1:2481362/1‑151 (MQ=255) ttATATGAATACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTg < 1:3772557/151‑1 (MQ=255) gAATACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGaaa < 1:1092372/151‑1 (MQ=255) aaTACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGaaaa < 1:3869472/151‑1 (MQ=255) aTACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAAt < 1:3220764/151‑1 (MQ=255) aTACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAAt < 1:2110678/151‑1 (MQ=255) aCCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAg < 1:3144794/151‑1 (MQ=255) ccTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAgg > 1:2645828/1‑151 (MQ=255) cTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGgc > 1:131422/1‑151 (MQ=255) ttAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGgcg < 1:4080764/151‑1 (MQ=255) aaCAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGcgcg < 1:3852321/151‑1 (MQ=255) aaTCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACt < 1:3358078/151‑1 (MQ=255) aaTCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACt < 1:114302/151‑1 (MQ=255) cAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTGCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCa > 1:2867589/1‑151 (MQ=255) cAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCa > 1:631068/1‑151 (MQ=255) cAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCa > 1:1484884/1‑151 (MQ=255) cAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCa < 1:1727601/151‑1 (MQ=255) aGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCaa > 1:310519/1‑151 (MQ=255) aGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCaa < 1:2606881/151‑1 (MQ=255) aGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCaa > 1:4138540/1‑151 (MQ=255) aGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCaa > 1:1456025/1‑151 (MQ=255) aaGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCa < 1:2924682/151‑1 (MQ=255) aaGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCa > 1:854050/1‑151 (MQ=255) tatTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTaa < 1:3580518/151‑1 (MQ=255) tatTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTaa > 1:1651766/1‑151 (MQ=255) tatTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCGATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTaa > 1:4172434/1‑151 (MQ=255) atTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTaaa > 1:433956/1‑151 (MQ=255) tGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAg < 1:3170338/151‑1 (MQ=255) aGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGAcc > 1:4298840/1‑151 (MQ=255) gTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCt > 1:1635408/1‑151 (MQ=255) tGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCtt > 1:4211716/1‑151 (MQ=255) ggggTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTc > 1:2289759/1‑151 (MQ=255) gggTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCa < 1:1548914/151‑1 (MQ=255) gggTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCa < 1:4028946/151‑1 (MQ=255) gTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCatt < 1:2970032/151‑1 (MQ=255) gTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCatt < 1:2310540/151‑1 (MQ=255) tGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCatta > 1:398077/1‑151 (MQ=255) cAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTc > 1:1466428/1‑151 (MQ=255) aaGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCt < 1:1022195/151‑1 (MQ=255) agagACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCtt < 1:805572/151‑1 (MQ=255) gagaCGGTAATGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCttt < 1:57869/151‑1 (MQ=255) agaCGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTc < 1:3377881/151‑1 (MQ=255) agaCGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTc < 1:123637/151‑1 (MQ=255) gaCGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCg > 1:4122518/1‑151 (MQ=255) cGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGc > 1:1099960/1‑151 (MQ=255) cGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGc < 1:373828/151‑1 (MQ=255) ggTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCa < 1:2436962/151‑1 (MQ=255) gTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAg < 1:305713/151‑1 (MQ=255) aTTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTg < 1:2075628/151‑1 (MQ=255) ttGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTgg < 1:3832001/151‑1 (MQ=255) tGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTggg > 1:2580912/1‑151 (MQ=255) tGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTggg < 1:544121/151‑1 (MQ=255) tGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTggg > 1:2865463/1‑151 (MQ=255) aGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCa < 1:1617960/151‑1 (MQ=255) tATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGAc > 1:741097/1‑151 (MQ=255) tATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGAc < 1:1526125/151‑1 (MQ=255) aTGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACa > 1:1042597/1‑151 (MQ=255) tGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACaa > 1:2350434/1‑151 (MQ=255) cTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATa < 1:1846707/151‑1 (MQ=255) tataGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAac > 1:3494497/1‑151 (MQ=255) ataGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAaca < 1:3253660/151‑1 (MQ=255) ataGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAaca > 1:1265104/1‑151 (MQ=255) taGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAacac < 1:3716539/151‑1 (MQ=255) aaaCTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCa > 1:1920285/1‑151 (MQ=255) cTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTg > 1:2806811/1‑151 (MQ=255) ttCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTgg > 1:3538826/1‑151 (MQ=255) ttCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTgg > 1:1425252/1‑151 (MQ=255) tCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGc < 1:3632045/151‑1 (MQ=255) tGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACt > 1:4228807/1‑151 (MQ=255) aCATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCg > 1:4205693/1‑151 (MQ=255) cATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCgg > 1:2768631/1‑151 (MQ=255) aTTGCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGa > 1:2749380/1‑151 (MQ=255) gCTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCt > 1:2496878/1‑151 (MQ=255) cTATACTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTg > 1:1787127/1‑151 (MQ=255) ataCTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGaa > 1:3196484/1‑151 (MQ=255) ataCTTGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGaa > 1:1827315/1‑151 (MQ=255) ttGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACt < 1:3514857/151‑1 (MQ=255) tGATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTa > 1:3276435/1‑151 (MQ=255) gATATTATCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTAt < 1:254975/151‑1 (MQ=255) tattatCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTAtgt > 1:2051471/1‑151 (MQ=255) atCATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTATGTTGTa > 1:1283991/1‑151 (MQ=255) cATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTATGTTGTaaa > 1:3465221/1‑151 (MQ=255) cATGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTATGTTGTaaa > 1:1975129/1‑151 (MQ=255) aTGCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTATGTTGTAAAg > 1:796795/1‑151 (MQ=255) gCCTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTATGTTGTAAAGcc < 1:3208974/151‑1 (MQ=255) cTCATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGCCCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTATGTTGTAAAGCCtt < 1:3208689/151‑1 (MQ=255) cATTTGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTATGTTGTAAAGCCTTTc > 1:938697/1‑151 (MQ=255) tGGACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTATGTTGTAAAGCCTTTCGACa < 1:3987704/151‑1 (MQ=255) ggACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTATGTTGTAAAGCCTTTCGACAt < 1:4012659/151‑1 (MQ=255) gACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTATGTTGTAAAGCCTTTCGACATg > 1:2422962/1‑151 (MQ=255) gACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTATGTTGTAAAGCCTTTCGACATg > 1:2632907/1‑151 (MQ=255) gACGGTTATGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTATGTTGTAAAGCCTTTCGACATg < 1:3070695/151‑1 (MQ=255) | TTTGGCGATATTTTATATGAATACCTTAACAATCAGGAAGATATTGAAGTGGTAGGGGTGGCAAGAGACGGTATTGAAGCTTATGAGCTTATAGTTGAAAAACTTCCTGACATTGCTATACTTGATATTATCATGCCTCATTTGGACGGTT‑TGGGTGTTTTGGAGAAAATAGGCGCGACTGCAATCAGTAAAAGACCTTTGTTCATTATTCTTTCGGCAGTGGGCCAGGACAAGATAACACAAAGAGCATTGGCACTCGGAGCTGAATACTATGTTGTAAAGCCTTTCGACATG > CP002416/1656710‑1657003 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |