| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP002416 | 1,269,424 | (A)7→8 | intergenic (+108/‑4134) | Clo1313_1060 → / → Clo1313_1065 | Hedgehog/intein hint domain protein/Domain of unknown function DUF1910 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP002416 | 1,269,424 | 1 | . | A | 99.3% | 619.5 / ‑3.4 | 152 | intergenic (+108/‑4134) | Clo1313_1060/Clo1313_1065 | Hedgehog/intein hint domain protein/Domain of unknown function DUF1910 |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base A (77/74); total (77/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.57e-01 | |||||||||||
Only 100 of 179 total aligned reads displayed.
AGGTTAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAA‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCATCCGGATGA > CP002416/1269275‑1269574 | ggTTAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTaaaaaaaag < 1:2161740/151‑3 (MQ=255) ggTTAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTaaaaaaaag > 1:3471725/1‑149 (MQ=255) ggTTAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTaaaaaaaag < 1:157755/151‑3 (MQ=255) gTTAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTaaaaaaaaga < 1:1611167/151‑4 (MQ=255) ttAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTaaaaaaaagat > 1:3882905/1‑147 (MQ=255) tAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTaaaaaaaagatt > 1:2012741/1‑146 (MQ=255) aaaCAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTg > 1:1703299/1‑151 (MQ=255) aaaCAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTg > 1:3038971/1‑151 (MQ=255) aaCAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGt > 1:29976/1‑151 (MQ=255) gCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTAtt < 1:3899119/151‑1 (MQ=255) aaTGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCt > 1:1324755/1‑151 (MQ=255) aaTGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCt > 1:256660/1‑151 (MQ=255) aTGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTg < 1:2879944/151‑1 (MQ=255) aTGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTg > 1:3621246/1‑151 (MQ=255) tGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGa > 1:3126379/1‑151 (MQ=255) tGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGa < 1:778953/151‑1 (MQ=255) tGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAg < 1:2469093/151‑1 (MQ=255) gAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAga < 1:966942/151‑1 (MQ=255) taatTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAgatgat < 1:220265/151‑1 (MQ=255) atTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGatat < 1:349593/151‑1 (MQ=255) tGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATgg < 1:1898125/151‑1 (MQ=255) tGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATgg > 1:803296/1‑151 (MQ=255) gATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGaa < 1:4240209/151‑1 (MQ=255) ttCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGaaaa > 1:3533226/1‑151 (MQ=255) cTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAg > 1:3047582/1‑151 (MQ=255) ggCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCAGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGt < 1:3327707/151‑1 (MQ=255) taaataaCAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACa < 1:2762375/151‑1 (MQ=255) taaataaCAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACa < 1:604524/151‑1 (MQ=255) aaataaCAAATGAAAAGGAGATGATGGGATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACaa > 1:2990915/1‑151 (MQ=255) aataaCAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACaaa < 1:1715117/151‑1 (MQ=255) ataaCAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAg < 1:723379/151‑1 (MQ=255) cAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGatat > 1:2214642/1‑151 (MQ=255) gAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAg < 1:2281863/151‑1 (MQ=255) aaaaGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAgg > 1:1772539/1‑151 (MQ=255) aaaGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAggg > 1:66334/1‑151 (MQ=255) aaGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGa < 1:2257216/151‑1 (MQ=255) aaGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGa > 1:4057715/1‑151 (MQ=255) aGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGAt < 1:2772907/151‑1 (MQ=255) ggAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATa < 1:3736877/151‑1 (MQ=255) agaTGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAAt > 1:791610/1‑151 (MQ=255) atgatgGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCa < 1:4188929/151‑1 (MQ=255) atgGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAg < 1:1996039/151‑1 (MQ=255) tgGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGc > 1:1408044/1‑151 (MQ=255) gTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCAt < 1:2441182/151‑1 (MQ=255) gagagaTCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAAtt < 1:3904970/151‑1 (MQ=255) gagaTCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGAATACAAAGATATCCAAGGGATAATCAAAGCATAATTTa > 1:2737046/1‑151 (MQ=255) agaTCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTAt < 1:1107177/151‑1 (MQ=255) aTCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGc < 1:3973236/151‑1 (MQ=255) aTCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGc > 1:1820626/1‑151 (MQ=255) tCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCt > 1:4180054/1‑151 (MQ=255) ccGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTa < 1:3070235/151‑1 (MQ=255) ccGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTa < 1:343515/151‑1 (MQ=255) cGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTAc < 1:4261537/151‑1 (MQ=255) cGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTAc > 1:769130/1‑151 (MQ=255) tATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGtt < 1:1373722/151‑1 (MQ=255) gCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGttttt < 1:2496105/151‑1 (MQ=255) cAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTa > 1:3887239/1‑151 (MQ=255) gAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACata < 1:845258/151‑1 (MQ=255) gAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACata < 1:1987044/151‑1 (MQ=255) aaaGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACatat < 1:3160291/151‑1 (MQ=255) aaaGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACatat > 1:4086021/1‑151 (MQ=255) aaaGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACatat > 1:1730127/1‑151 (MQ=255) ttatttatTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGttt < 1:463460/151‑1 (MQ=255) ttatttatTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGttt < 1:765838/151‑1 (MQ=255) tttattAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATg < 1:1072696/151‑1 (MQ=255) tttattAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATg < 1:442399/151‑1 (MQ=255) ttattaGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGt < 1:1122195/151‑1 (MQ=255) taGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATaa > 1:3986427/1‑151 (MQ=255) aaCAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACg > 1:573740/1‑151 (MQ=255) aaCAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACg > 1:373436/1‑151 (MQ=255) aCAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACgg < 1:1425428/151‑1 (MQ=255) aTAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGATACGTTTTTACATATGTTTATGTATAACACGGaaa > 1:2303707/1‑151 (MQ=255) gAATATGGCAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGc > 1:477964/1‑151 (MQ=255) aaTATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCt < 1:1895195/151‑1 (MQ=255) tatGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTa < 1:1480774/151‑1 (MQ=255) atGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTAc > 1:2668400/1‑151 (MQ=255) ttaCAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACa > 1:2922532/3‑151 (MQ=255) gACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAg > 1:2387331/1‑151 (MQ=255) cAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGcc > 1:3035575/1‑151 (MQ=255) aagaagGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCaa > 1:1759653/1‑151 (MQ=255) tgaagGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCaaa > 1:2599442/2‑151 (MQ=255) gaagGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAAt > 1:1953410/1‑151 (MQ=255) agGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATAc > 1:1460244/1‑151 (MQ=255) ggAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATAct < 1:3651791/151‑1 (MQ=255) aaTTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATActct > 1:3855880/1‑151 (MQ=255) aaTTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATActct < 1:4278620/151‑1 (MQ=255) aTTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCtt > 1:1015824/1‑151 (MQ=255) aTTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCtt > 1:2148224/1‑151 (MQ=255) ttttaaaagtaaaaAAA‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAg < 1:4146170/148‑1 (MQ=255) aagtaaaaaaaa‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGt > 1:3257434/6‑151 (MQ=255) aaagtaaaaAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAg > 1:1030946/1‑151 (MQ=255) agtaaaaaaaa‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTc < 1:523559/147‑1 (MQ=255) agtaaaaaaaa‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTc < 1:2359921/147‑1 (MQ=255) gtaaaaaaaa‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCa > 1:638530/4‑151 (MQ=255) taaaaaaaa‑GATAGTTATTCTGAAAGATGATATGGAAAAAGGAATACAAAGATATCCATGGGAAAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCAAACTACTCTTTAGGTAGTCAt > 1:3310181/3‑151 (MQ=18) aaaaaaa‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCATcc < 1:2936337/151‑1 (MQ=255) aaaaaaa‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCATcc > 1:2025165/1‑151 (MQ=255) aaaaa‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCATCCgg > 1:501303/1‑151 (MQ=255) aaa‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCATCCGGAt < 1:3300444/151‑1 (MQ=255) a‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCATCCGGATGa > 1:3486180/1‑151 (MQ=255) | AGGTTAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAA‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCATCCGGATGA > CP002416/1269275‑1269574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |