BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP002416	730327 =	NA (NA)	116 (1.220)	89/292	0.1	NA	intergenic (+37/‑130)	Clo1313_R0024/Clo1313_0644	tRNA‑Tyr/transposase IS200‑family protein
*	?	CP002416	= 731058	NA (NA)	116 (1.220)	89/292	0.1	NA	intergenic (+125/+177)	Clo1313_0644/Clo1313_0645	transposase IS200‑family protein/glycosyl transferase family 2

Only 100 of 103 total aligned reads displayed.

TTCGATTCCGTCCACCAGCTCCATATGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGGTTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTGATAATGCTA  >  CP002416/730180‑730472

ttCGATTCCGTCCACCAGCTCCATATGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTg                                                                                                                                                 <  1:45233/150‑1 (MQ=255)

   gATTCCGTCCACCAGCTCCATATGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGttt                                                                                                                                              >  1:43656/1‑150 (MQ=255)

   gATTCCGTCCACCAGCTCCATATGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGttt                                                                                                                                              <  1:52898/150‑1 (MQ=255)

    aTTCCGTCCACCAGCTCCATATGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTa                                                                                                                                             <  1:45231/150‑1 (MQ=255)

     ttCCGTCCACCAGCTCCATATGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTaa                                                                                                                                            <  1:45229/150‑1 (MQ=255)

      tCCGTCCACCAGCTCCATATGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTaaa                                                                                                                                           >  1:43184/1‑150 (MQ=255)

          tCCACCAGCTCCATATGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGaaa                                                                                                                                       <  1:52964/150‑1 (MQ=255)

              ccaGCTCCATATGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCa                                                                                                                                   <  1:45227/150‑1 (MQ=255)

               caGCTCCATATGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCAc                                                                                                                                  >  1:42096/1‑150 (MQ=255)

                  cTCCATATGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTgg                                                                                                                               >  1:45239/1‑150 (MQ=255)

                   tCCATATGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGaa                                                                                                                                        <  1:46030/140‑1 (MQ=255)

                    ccATATGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCt                                                                                                                             <  1:46034/150‑1 (MQ=255)

                       tatGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATg                                                                                                                          <  1:45225/150‑1 (MQ=255)

                        atGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGc                                                                                                                         <  1:45834/150‑1 (MQ=255)

                        atGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGc                                                                                                                         >  1:45241/1‑150 (MQ=255)

                              ggATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTgg                                                                                                                   >  1:42774/1‑150 (MQ=255)

                                aTTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGtt                                                                                                                 <  1:52860/150‑1 (MQ=255)

                                  tCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTACGCCAGTGGTTCt                                                                                                               >  1:42040/1‑150 (MQ=255)

                                   cccGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATACCAGTGGTTCTa                                                                                                              <  1:45223/150‑1 (MQ=255)

                                    ccGAGTGGCCAAAGGGGGCAGACTGTAAAGCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTaa                                                                                                             <  1:52900/150‑1 (MQ=255)

                                     cGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTaaa                                                                                                            >  1:45243/1‑150 (MQ=255)

                                          ggCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGAc                                                                                                       >  1:42188/1‑150 (MQ=255)

                                           gCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACa                                                                                                      <  1:45221/150‑1 (MQ=255)

                                           gCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACa                                                                                                      <  1:45219/150‑1 (MQ=255)

                                            ccAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAg                                                                                                     <  1:53372/150‑1 (MQ=255)

                                             cAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAgt                                                                                                    <  1:45217/150‑1 (MQ=255)

                                             cAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAgt                                                                                                    <  1:45215/150‑1 (MQ=255)

                                              aaaGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAgtg                                                                                                   >  1:38932/1‑150 (MQ=255)

                                              aaaGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAgtg                                                                                                   <  1:45213/150‑1 (MQ=255)

                                              aaaGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAgtg                                                                                                   <  1:52912/150‑1 (MQ=255)

                                              aaaGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAgtg                                                                                                   <  1:73228/150‑1 (MQ=255)

                                                   gggCAGACTTTAAATCTGTTGGCTCAGCCTTCGATGGGTCGAATCCCTCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTAt                                                                                              <  1:73226/150‑1 (MQ=255)

                                                    ggCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATg                                                                                             <  1:45211/150‑1 (MQ=255)

                                                    ggCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATg                                                                                             <  1:45209/150‑1 (MQ=255)

                                                      cAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAg                                                                                           >  1:45245/1‑150 (MQ=255)

                                                      cAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAg                                                                                           >  1:45247/1‑150 (MQ=255)

                                                      cAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAg                                                                                           <  1:45824/150‑1 (MQ=255)

                                                      cAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAg                                                                                           <  1:45207/150‑1 (MQ=255)

                                                      cAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAg                                                                                           <  1:45205/150‑1 (MQ=255)

                                                         aCTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAg                                                                                        <  1:73224/150‑1 (MQ=255)

                                                             tAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGaaaa                                                                                    >  1:45249/1‑150 (MQ=255)

                                                             tAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGaaaa                                                                                    <  1:45203/150‑1 (MQ=255)

                                                                 tCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGt                                                                                <  1:45201/150‑1 (MQ=255)

                                                                  cTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTa                                                                               >  1:45251/1‑150 (MQ=255)

                                                                     ttGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAAcc                                                                            >  1:42732/1‑150 (MQ=255)

                                                                      tGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAAcct                                                                           >  1:42780/1‑150 (MQ=255)

                                                                       ggCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAAcctc                                                                          >  1:45253/1‑150 (MQ=255)

                                                                          tCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCtt                                                                       <  1:52920/150‑1 (MQ=255)

                                                                          tCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCtt                                                                       >  1:43142/1‑150 (MQ=255)

                                                                           cAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCttt                                                                      >  1:40114/1‑150 (MQ=255)

                                                                            aGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTg                                                                     <  1:45199/150‑1 (MQ=255)

                                                                             gCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGt                                                                    <  1:45197/150‑1 (MQ=255)

                                                                                ttCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTAc                                                                 >  1:40158/1‑150 (MQ=255)

                                                                                  cGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACaa                                                               >  1:42118/1‑150 (MQ=255)

                                                                                  cGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACaa                                                               >  1:45255/1‑150 (MQ=255)

                                                                                   gATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACaat                                                              <  1:45195/150‑1 (MQ=255)

                                                                                   gATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACa                                                                <  1:52892/148‑1 (MQ=255)

                                                                                     tGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACaataa                                                            <  1:52896/150‑1 (MQ=255)

                                                                                         tCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTa                                                        <  1:52904/150‑1 (MQ=255)

                                                                                          cGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAg                                                       >  1:42060/1‑150 (MQ=255)

                                                                                          cGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAg                                                       <  1:46032/150‑1 (MQ=255)

                                                                                             aTCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAgatt                                                    >  1:42776/1‑147 (MQ=255)

                                                                                              tCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTc                                                   <  1:44047/150‑1 (MQ=255)

                                                                                              tCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTc                                                   >  1:43152/1‑150 (MQ=255)

                                                                                                    tccctccACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAAc                                             >  1:43126/1‑150 (MQ=255)

                                                                                                      cctccACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTa                                           >  1:44127/1‑150 (MQ=255)

                                                                                                        tccACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACa                                         >  1:44133/1‑150 (MQ=255)

                                                                                                          caccaGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACAtt                                       >  1:41862/1‑150 (MQ=255)

                                                                                                           accaGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTa                                      >  1:44141/1‑150 (MQ=255)

                                                                                                            ccaGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTaa                                     >  1:40362/1‑150 (MQ=255)

                                                                                                             taGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTaaa                                    >  1:40334/2‑150 (MQ=255)

                                                                                                              aGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTaaaa                                   >  1:44167/1‑150 (MQ=255)

                                                                                                              aGACAAAAGCGAGTATAAAATACTCGCTCTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTaaaa                                   >  1:44159/1‑150 (MQ=255)

                                                                                                               gACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTaaaaa                                  >  1:44173/1‑150 (MQ=255)

                                                                                                                    aaGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAag                             >  1:44193/1‑150 (MQ=255)

                                                                                                                     aGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAagg                            <  1:45252/150‑1 (MQ=255)

                                                                                                                      gCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAagga                           <  1:43957/150‑1 (MQ=255)

                                                                                                                        gAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAaggagg                         >  1:41818/1‑150 (MQ=255)

                                                                                                                             taAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCa                    <  1:46028/150‑1 (MQ=255)

                                                                                                                              aaaaTACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCAc                   >  1:42730/1‑150 (MQ=255)

                                                                                                                               aaaTACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACg                  >  1:42758/1‑150 (MQ=255)

                                                                                                                                gcggatatcctttGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGa                 >  1:40272/11‑150 (MQ=255)

                                                                                                                                 aTACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGAt                >  1:42166/1‑150 (MQ=255)

                                                                                                                                 aTACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGAt                >  1:42012/1‑150 (MQ=255)

                                                                                                                                 aTACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGAt                <  1:43897/150‑1 (MQ=255)

                                                                                                                                 aTACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGAATCACGAt                >  1:40456/1‑150 (MQ=255)

                                                                                                                                  tACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATg               <  1:43893/150‑1 (MQ=255)

                                                                                                                                      cGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTg           <  1:45842/150‑1 (MQ=38)

                                                                                                                                       gCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTg           >  1:44251/1‑149 (MQ=37)

                                                                                                                                       gCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTGa          >  1:44253/1‑150 (MQ=37)

                                                                                                                                        cTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTGAt         >  1:44261/1‑150 (MQ=25)

                                                                                                                                         ttttGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTGATa        <  1:46048/150‑1 (MQ=25)

                                                                                                                                         ttttGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTGATa        <  1:45832/150‑1 (MQ=25)

                                                                                                                                         ttttGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTGATa        >  1:40186/1‑150 (MQ=25)

                                                                                                                                          tttGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTGATaa       >  1:44263/1‑150 (MQ=21)

                                                                                                                                          tttGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTGATaa       >  1:44267/1‑150 (MQ=21)

                                                                                                                                             gtgtTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTGATAATGc    >  1:44271/1‑150 (MQ=17)

                                                                                                                                             gtgtTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTGATAATGc    <  1:43857/150‑1 (MQ=17)

                                                                                                                                              tgtTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTGATAATGCt   >  1:43100/1‑150 (MQ=14)

                                                                                                                                               gtTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGATTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTGATAATGCTa  <  1:46040/150‑1 (MQ=11)

TTCGATTCCGTCCACCAGCTCCATATGGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGATGGTTCGAATCCATCTCCCTCCACCAGACAAAAGCGAGTATAAAATACTCGCTTTTGTGTTTTTGTTTAAAGAAAACCACTGGCTATGCCAGTGGTTCTAAAGAGACAGTGTCTATGAGTAGAAAAAAGTAACCTCCTTTGTTACAATAATGTAGGTTCGCCAACTACATTAAAAACAAAGGAGGTATCACGATGCGTGATAATGCTA  >  CP002416/730180‑730472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.