| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP002416 | 575,494 | C→T | V30V (GTG→GTA) | Clo1313_0521 ← | glycoside hydrolase family 11 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP002416 | 575,494 | 0 | C | T | 99.1% | 342.8 / NA | 112 | V30V (GTG→GTA) | Clo1313_0521 | glycoside hydrolase family 11 |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (81/30); minor base G (0/1); total (81/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 113 total aligned reads displayed.
ACCTTTACGGAAAAGAATATTGTTGATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACCACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGGAGATTATACGAAGAAGG > CP002416/575347‑575640 | aCCTTTACGGAAAAGAATATTGTTGATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACtaca > 1:2744708/1‑151 (MQ=17) tACGGAAAAGAATATTGTTGATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAgc > 1:2736646/1‑151 (MQ=17) ggAAAAGAATATTGTTGATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGcgcg > 1:2503209/1‑151 (MQ=17) ggAAAAGAATATTGTTGATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGcgcg > 1:1101372/1‑151 (MQ=17) ggAAAAGAATATTGTTGATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGcgcg > 1:481631/1‑151 (MQ=17) aaaaGAATATTGTTGATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTa > 1:1860676/1‑151 (MQ=17) aaGAATATTGTTGATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACa > 1:877273/1‑151 (MQ=17) aGAATATTGTTGATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACAt > 1:2102470/1‑151 (MQ=17) gAATATTGTTGATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACAtt > 1:1042175/1‑151 (MQ=17) gAATATTGTTGATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACAtt > 1:1623973/1‑151 (MQ=17) tatTGTTGATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTAc > 1:2564000/1‑151 (MQ=17) atTGTTGATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGTCGTAATTACTACATCAGCGCGTACATTTAcc > 1:3475525/1‑151 (MQ=12) tgttgATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCgg > 1:1410051/1‑151 (MQ=17) gttgATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATAACTACATCAGCGCGTACATTTACCGGa > 1:2351206/1‑151 (MQ=12) tatTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACaa > 1:938054/1‑151 (MQ=17) tatTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACaa > 1:820439/1‑151 (MQ=17) ttGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAg > 1:636555/1‑151 (MQ=17) gCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTc > 1:1416447/1‑151 (MQ=17) cTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCa > 1:1422199/1‑151 (MQ=17) ccATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGt > 1:3404765/1‑151 (MQ=18) cATTCGAAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ATCCGCCATGAGTACCCGCCTGGTTTGTCGTAATTACTACATCAGCACGTACATTTACCGGAAACAAAGTCAGTg > 1:501118/1‑151 (MQ=11) aTTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑CT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGa > 1:3163301/1‑151 (MQ=19) ttCGCAGCTGACCGCCCCCCCGTTTTGGGGGCCCTTGGTTCGTTTTCCGGT‑TTCTTT‑CCAGTACT‑AAAG‑TT‑TTTCCCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGaa < 1:874706/151‑1 (MQ=2) cGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAAc > 1:3108452/1‑151 (MQ=25) gCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACg > 1:1198414/1‑151 (MQ=25) cAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACgg > 1:1081096/1‑151 (MQ=25) aGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGt > 1:106183/1‑151 (MQ=25) aGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGt > 1:242069/1‑151 (MQ=25) aaCGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAg > 1:2182360/1‑151 (MQ=25) aaCGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAg > 1:1004522/1‑151 (MQ=25) gCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTaa > 1:1133501/1‑151 (MQ=25) caccacCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAAt > 1:207453/1‑151 (MQ=25) accaccGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAAtt > 1:1647469/1‑151 (MQ=25) ccccctttttggAGGCCCATGGTTCC‑TTTCCGGT‑TTTTTTTCCAGTA‑TAAAAGGTT‑GT‑CCCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTa < 1:817786/140‑1 (MQ=11) ccaccGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTa > 1:1276720/1‑151 (MQ=25) caccGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTaa > 1:208804/1‑151 (MQ=25) cagctttggAGGACCTTGGTTCTTTTTCCGTT‑TTCTTT‑CCATAACACAAAG‑TT‑TT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTaaaa < 1:2568333/143‑1 (MQ=11) tCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCa > 1:727379/1‑151 (MQ=25) tCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCa > 1:44749/1‑151 (MQ=25) tttGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAgg > 1:2548777/1‑151 (MQ=25) aCCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTa > 1:1000780/1‑151 (MQ=25) aCCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTa > 1:3130739/1‑151 (MQ=25) aCCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTa > 1:2506229/1‑151 (MQ=25) ccATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTACAAGTAATTAAAATCAGGAAAGTTAc > 1:2159031/1‑151 (MQ=255) cATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTAcc > 1:2745056/1‑151 (MQ=25) tGGTTCCTTTTCGGGT‑GTTTTC‑CCAGTACT‑AAAG‑TTTGT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAg < 1:3081861/151‑1 (MQ=11) ggTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGt > 1:332183/1‑151 (MQ=25) ttcctttCCGGTTGTCTTT‑CCTTTACTAAATT‑TT‑GC‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTaa < 1:1111468/147‑1 (MQ=11) tCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAAt > 1:2716545/1‑151 (MQ=25) ccttttctgggtttCTTT‑CCAGTCCTAAATG‑TT‑GA‑CCCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAAt < 1:2284672/138‑1 (MQ=11) ccGTTTCGGGT‑TTCTTC‑CCAGTCCTAAAAG‑TT‑GT‑CCCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAAtt < 1:269756/151‑1 (MQ=11) ccGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAAtt > 1:3133149/1‑151 (MQ=25) gTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAAtttt > 1:700412/1‑151 (MQ=25) gTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAAtttt > 1:2570526/1‑151 (MQ=25) ttcgggT‑GTCTTC‑CAAGTACTAAAAT‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTg < 1:1460214/147‑1 (MQ=11) ttCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTg > 1:801434/1‑151 (MQ=25) tCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGt > 1:3072927/1‑151 (MQ=25) ggT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGtctc > 1:2559670/1‑151 (MQ=38) ggT‑GCCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGtctc > 1:915896/1‑151 (MQ=255) t‑gtCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCAt > 1:187166/1‑151 (MQ=255) tttcccAGTACTAAAAT‑TT‑GT‑CCCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCAtttt < 1:1762171/147‑1 (MQ=14) ccaagtactaattttt‑GT‑CCCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGct < 1:1079087/137‑1 (MQ=14) gTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTcc > 1:1355945/1‑151 (MQ=255) aagttttccccccGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTttct < 1:35621/141‑1 (MQ=255) aG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCa > 1:79389/1‑151 (MQ=255) g‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAg > 1:1641456/1‑151 (MQ=255) g‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGCCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAg > 1:2654102/1‑151 (MQ=255) ttct‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGc < 1:938055/148‑1 (MQ=255) gtcggttccggcATGAGTTCCCGTCTGGTTTGACGTAATTACGACAGCAGCGCGTACATTTAGCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATGATTGTATCATTTTGCTCTACTTTCTTCAg < 1:1781385/140‑1 (MQ=14) t‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGa > 1:1882453/1‑151 (MQ=255) cccGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGAtt > 1:1027537/1‑151 (MQ=255) cGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTat < 1:933997/151‑1 (MQ=255) cGCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTat > 1:1898049/1‑151 (MQ=255) gCCATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTatc > 1:2301619/1‑151 (MQ=255) gCCATGAGTACCCGTCTGGTTTGACGGAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTTAGTGAAACGTCAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTGGTCTCATTTTGATCTCCTTTCTTCAGCCGATTatc > 1:2365007/1‑151 (MQ=17) ccATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTatca > 1:2827875/1‑151 (MQ=255) ccATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTatca > 1:213086/1‑151 (MQ=255) ccATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTatca < 1:1975683/151‑1 (MQ=255) cATGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTatcat > 1:1224740/1‑151 (MQ=255) aTGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTatcatc < 1:2584442/151‑1 (MQ=255) tGAGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATcc > 1:3155962/1‑151 (MQ=255) aGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCaa < 1:1062400/151‑1 (MQ=255) aGTACCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCaa > 1:1298821/1‑151 (MQ=255) aCCCGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGtt < 1:2009237/151‑1 (MQ=255) cGTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTgg < 1:2770718/151‑1 (MQ=255) gTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGga > 1:346373/1‑151 (MQ=255) gTCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGga > 1:2199746/1‑151 (MQ=255) tCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGgag < 1:1326161/151‑1 (MQ=255) tCTGGTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGgag < 1:1830760/151‑1 (MQ=255) cTGGTTTGACGTAATTACTACATCAGCGCGCACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGCAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGgaga > 1:956055/1‑151 (MQ=255) ggTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAATAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCGTCAGCCTATTATCATCCAAGTTTGGAGAtt < 1:2154357/151‑1 (MQ=18) ggTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGGAGAtt > 1:1941257/1‑151 (MQ=255) ggTTTGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGGAGAtt > 1:1222826/1‑151 (MQ=255) tttGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGGAGATtat < 1:647252/151‑1 (MQ=255) ttGACGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGGAGATtata < 1:1234692/151‑1 (MQ=255) cGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGGAGATTATACgaa < 1:1666067/151‑1 (MQ=255) cGTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGGAGATTATACgaa > 1:257191/1‑151 (MQ=255) gTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGGAGATTATACgaag > 1:1781430/1‑151 (MQ=255) gTAATTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGGAGATTATACgaag < 1:2898963/151‑1 (MQ=255) aaTTACTACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGGAGATTATACgaagaa < 1:1363644/151‑1 (MQ=255) | ACCTTTACGGAAAAGAATATTGTTGATATTGCTCCATTCGCAGCTGAACGCACCACCGTCTTTGAGGACCATGGTTCCGTTTCCGGT‑GTCTTT‑CCAGTACTCAAAG‑TT‑GT‑ACCCGCCATGAGTACCCGTCTGGTTTGACGTAATTACCACATCAGCGCGTACATTTACCGGAAACAAAGTCAGTGAAACGGTAAAAGTAATTAAAATCAGGAAAGTTACCAGTAATTTTTGTCTCATTTTGCTCTCCTTTCTTCAGCCGATTATCATCCAAGTTTGGAGATTATACGAAGAAGG > CP002416/575347‑575640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |