Predicted mutation
evidence seq id position mutation annotation gene description
RA CP002416 3,551,628 G→T S529R (AGC→AGA)  Clo1313_3024 ← DNA gyrase, A subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0024163,551,6280GT100.0% 675.6 / NA 171S529R (AGC→AGA) Clo1313_3024DNA gyrase, A subunit
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (81/90);  total (81/90)

Only 100 of 171 total aligned reads displayed.

GGTCTTTAGCCTGTAAACCTTGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTGCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCATACTTTTGTTTAATTTCCTC  >  CP002416/3551481‑3551774
                                                                                                                                                   |                                                                                                                                                  
ggTCTTTAGCCTGTAAACCTTGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTg                                                                                                                                                 <  1:2628658/151‑1 (MQ=255)
 gTCTTTAGCCTGTAAACCTTGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTgg                                                                                                                                                <  1:2962711/151‑1 (MQ=255)
      tAGCCTGTAAACCTTGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGa                                                                                                                                           <  1:870625/151‑1 (MQ=255)
       aGCCTGTAAACCTTGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGaa                                                                                                                                          <  1:2000342/151‑1 (MQ=255)
       aGCCTGTAAACCTTGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGaa                                                                                                                                          >  1:571755/1‑151 (MQ=255)
         ccTGTAAACCTTGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGGGCTAAGTCCAATTATACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGt                                                                                                                                        >  1:169602/1‑151 (MQ=255)
          cTGTAAACCTTGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTc                                                                                                                                       >  1:510440/1‑151 (MQ=255)
               aaCCTTGCGCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCttttt                                                                                                                                  <  1:2264820/151‑1 (MQ=255)
               aaCCTTGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACGTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCttttt                                                                                                                                  <  1:244940/151‑1 (MQ=255)
               aaCCTTGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCttttt                                                                                                                                  >  1:1539760/1‑151 (MQ=255)
                aacctttccTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTta                                                                                                                                 <  1:2680829/144‑1 (MQ=255)
                aCCTTGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTta                                                                                                                                 <  1:2760208/151‑1 (MQ=255)
                  cTTGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTtatt                                                                                                                               >  1:494626/1‑150 (MQ=255)
                  cTTGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTtata                                                                                                                               <  1:1258353/151‑1 (MQ=255)
                   ttGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAGCAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTtatat                                                                                                                              <  1:1521947/151‑1 (MQ=255)
                        cTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCa                                                                                                                         <  1:3170482/151‑1 (MQ=255)
                        cTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCa                                                                                                                         <  1:3060028/151‑1 (MQ=255)
                        cTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCa                                                                                                                         >  1:2448891/1‑151 (MQ=255)
                          tgtttgtAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCaaa                                                                                                                       <  1:2656206/151‑1 (MQ=255)
                             ttgtAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATg                                                                                                                    >  1:2394887/1‑151 (MQ=255)
                                 aaaGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTa                                                                                                                <  1:1462957/151‑1 (MQ=255)
                                 aaaGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTa                                                                                                                >  1:349099/1‑151 (MQ=255)
                                  aaGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTaa                                                                                                               <  1:1252746/151‑1 (MQ=255)
                                     aaCAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAggg                                                                                                            <  1:1539761/151‑1 (MQ=255)
                                      aCAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGt                                                                                                           <  1:3383559/151‑1 (MQ=255)
                                          tATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGGGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGACGTCTTTTTATTTATCCAAAATGGGTACGGGTTaca                                                                                                       >  1:2741878/1‑151 (MQ=255)
                                           aTGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTacaa                                                                                                      <  1:401018/151‑1 (MQ=255)
                                            tGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTacaac                                                                                                     <  1:1963114/151‑1 (MQ=255)
                                              tAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACAt                                                                                                   <  1:2758114/151‑1 (MQ=255)
                                               aaTCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACAtt                                                                                                  <  1:3371671/151‑1 (MQ=255)
                                               aaTCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACAtt                                                                                                  <  1:2123130/151‑1 (MQ=255)
                                                   aTGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTttct                                                                                              >  1:3165817/1‑151 (MQ=255)
                                                    tGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAGGGGTTACAACATTttctt                                                                                             <  1:1734294/151‑1 (MQ=255)
                                                    tGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTttctt                                                                                             >  1:2648490/1‑151 (MQ=255)
                                                    tGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTttctt                                                                                             <  1:1138199/151‑1 (MQ=255)
                                                      ggTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCa                                                                                           <  1:872694/151‑1 (MQ=255)
                                                      ggTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCa                                                                                           <  1:383393/151‑1 (MQ=255)
                                                      ggTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCa                                                                                           <  1:214371/151‑1 (MQ=255)
                                                         cGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACt                                                                                        >  1:2399178/1‑151 (MQ=255)
                                                         cGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACt                                                                                        >  1:693719/1‑151 (MQ=255)
                                                          gAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACtt                                                                                       <  1:405785/151‑1 (MQ=255)
                                                           aaGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTc                                                                                      >  1:2248661/1‑151 (MQ=255)
                                                           aaGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTc                                                                                      >  1:2161358/1‑151 (MQ=255)
                                                                 taAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAg                                                                                <  1:1351223/151‑1 (MQ=255)
                                                                 taAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAg                                                                                >  1:1084380/1‑151 (MQ=255)
                                                                  aaaCAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAgg                                                                               <  1:380746/151‑1 (MQ=255)
                                                                    aCAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTc                                                                             >  1:2939040/1‑151 (MQ=255)
                                                                     cAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCt                                                                            >  1:2293809/1‑151 (MQ=255)
                                                                           cTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAAtt                                                                      <  1:1059006/151‑1 (MQ=255)
                                                                           cTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAAtt                                                                      >  1:154657/1‑151 (MQ=255)
                                                                            tCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAAttt                                                                     >  1:2574153/1‑151 (MQ=255)
                                                                            tCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAAttt                                                                     <  1:622601/151‑1 (MQ=255)
                                                                               acaaAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTa                                                                  <  1:2140278/151‑1 (MQ=255)
                                                                                caaAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTAt                                                                 <  1:2494236/151‑1 (MQ=255)
                                                                                caaAGTCTTCTTCCCGGGTGCTAAGTCCAATAACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTac                                                                 >  1:2878590/1‑150 (MQ=255)
                                                                                 aaaGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTAtt                                                                <  1:2320459/151‑1 (MQ=255)
                                                                                  aaGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTAttt                                                               <  1:292530/151‑1 (MQ=255)
                                                                                  aaGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTAttt                                                               >  1:1556168/1‑151 (MQ=255)
                                                                                  aaGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTAttt                                                               >  1:3346046/1‑151 (MQ=255)
                                                                                   aGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTc                                                              <  1:1245864/151‑1 (MQ=255)
                                                                                    gTCTTCTTCCCGGGTGCTAAGTCCAATTACCCCTTTTCCGCCTCTTTTTTGGCTTTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATA‑GGTCTTCAATTTCTATTTCGt                                                            <  1:1206835/151‑1 (MQ=255)
                                                                                      cttcttCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTc                                                           <  1:3444748/151‑1 (MQ=255)
                                                                                       ttcttcCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCt                                                          >  1:751342/1‑151 (MQ=255)
                                                                                        tcttcCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCtt                                                         >  1:740835/1‑151 (MQ=255)
                                                                                        tcttcCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCtt                                                         >  1:3386672/1‑151 (MQ=255)
                                                                                           tcCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTtcat                                                      >  1:123397/1‑151 (MQ=255)
                                                                                            cccGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTtcatc                                                     >  1:2556583/1‑151 (MQ=255)
                                                                                              cGGGTGCTAAGTCCAATTACGCCTTTTCCGCCTCTTTTTGGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAGCTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAg                                                   <  1:330375/151‑1 (MQ=255)
                                                                                               gggTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAgg                                                  >  1:1568341/1‑151 (MQ=255)
                                                                                               gggTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAgg                                                  >  1:693223/1‑151 (MQ=255)
                                                                                               gggTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAgg                                                  <  1:1923588/151‑1 (MQ=255)
                                                                                                     tAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGgatgat                                            <  1:2043231/151‑1 (MQ=255)
                                                                                                      aaGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGAtt                                           >  1:2938002/1‑151 (MQ=255)
                                                                                                             aTTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTcc                                    <  1:1589269/151‑1 (MQ=255)
                                                                                                              ttACTCCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAGCTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCct                                   <  1:3276457/151‑1 (MQ=255)
                                                                                                              ttACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCct                                   <  1:1260868/151‑1 (MQ=255)
                                                                                                              ttACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCct                                   <  1:1387325/151‑1 (MQ=255)
                                                                                                               aacacCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCctt                                  <  1:2863347/150‑1 (MQ=255)
                                                                                                                 cacCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCcttct                                <  1:334742/151‑1 (MQ=255)
                                                                                                                  acCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCcttctt                               <  1:1143655/151‑1 (MQ=255)
                                                                                                                   ccTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCttt                              <  1:2834082/151‑1 (MQ=255)
                                                                                                                    cTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTc                             >  1:2354900/1‑151 (MQ=255)
                                                                                                                    cTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTCACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTc                             >  1:1700426/1‑151 (MQ=255)
                                                                                                                     ttttCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCg                            <  1:1028969/151‑1 (MQ=255)
                                                                                                                       ttCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACGACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTc                          <  1:722530/151‑1 (MQ=255)
                                                                                                                        tCCGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTcc                         <  1:2578953/151‑1 (MQ=255)
                                                                                                                          cGCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTcccc                       >  1:1777145/1‑151 (MQ=255)
                                                                                                                           gCCTCTTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCa                      >  1:702749/1‑151 (MQ=255)
                                                                                                                             ctctTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCATa                    <  1:951647/151‑1 (MQ=255)
                                                                                                                              tctTTTTTGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCATAc                   <  1:1571355/151‑1 (MQ=255)
                                                                                                                                ttttttGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCATACtt                 <  1:1669094/151‑1 (MQ=255)
                                                                                                                                 tttttGGCCCTTGTAAGTTCTGGGCGGAAGTCTTTTTATATATCCAAAATGGGCAAGCTTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCATACttt                >  1:3464710/1‑151 (MQ=255)
                                                                                                                                  ttttGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCATACtttt               <  1:2986249/151‑1 (MQ=255)
                                                                                                                                     tGGCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCATACTTTTGtt            <  1:548202/151‑1 (MQ=255)
                                                                                                                                       gCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCATACTTTTGTTTa          >  1:1223550/1‑151 (MQ=255)
                                                                                                                                       gCTCTTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCATACTTTTGTTTa          >  1:1401787/1‑151 (MQ=255)
                                                                                                                                         tctTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTAAAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCATACTTTTGTTTAAt        >  1:2792902/1‑151 (MQ=255)
                                                                                                                                          ctTGTAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCATACTTTTGTTTAAtt       <  1:971791/151‑1 (MQ=255)
                                                                                                                                              tAAGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCATACTTTTGTTTAATTtcct   >  1:3158018/1‑151 (MQ=255)
                                                                                                                                               aaGTTCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCATACTTTTGTTTAATTtcctc  >  1:769153/1‑151 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GGTCTTTAGCCTGTAAACCTTGCCCTTGTTTGTAAAGAACAGTATGTAATCATGGGTCGAAGTTATAAACAGTTGCTCAACAAAGTCTTCTTCCCGGGTGCTAAGTCCAATTACACCTTTTCCGCCTCTTTTTTGGCTCTTGTAAGTGCTGGTCGGAAGTCTTTTTATATATCCAAAATGGGTAAGGGTTACAACATTTTCTTCAACTTCTATAAGGTCTTCAATTTCTATTTCGTCTTCATCAGGGATGATTTTCGTCCTTCTTTCGTCCCCATACTTTTGTTTAATTTCCTC  >  CP002416/3551481‑3551774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑