BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP002416	2,941,064	C→T	intergenic (‑2930/+727)	Clo1313_2511 ← / ← Clo1313_2515	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP002416	2,941,064	0	C	T	100.0%	399.0 / NA	114	intergenic (‑2930/+727)	Clo1313_2511/Clo1313_2515	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (56/58); total (56/58)

Only 100 of 114 total aligned reads displayed.

AAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGCTCCGACAGGTTATATATTGGCTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGGTGTC  >  CP002416/2940922‑2941183

aaaTATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACttt                                                                                                                 <  1:478428/151‑1 (MQ=12)

 aaTATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTa                                                                                                                >  1:3153631/1‑151 (MQ=12)

 aaTATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTa                                                                                                                <  1:2431389/151‑1 (MQ=12)

 aaTATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTa                                                                                                                <  1:2658835/151‑1 (MQ=12)

   tatCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAAc                                                                                                              >  1:2195576/1‑151 (MQ=16)

   tatCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAAc                                                                                                              >  1:1861872/1‑151 (MQ=16)

   tatCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAAc                                                                                                              >  1:1878642/1‑151 (MQ=16)

      cAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACAtt                                                                                                           <  1:1535930/151‑1 (MQ=255)

        gCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACAtttt                                                                                                         <  1:2558571/151‑1 (MQ=255)

         ccTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTc                                                                                                        <  1:1340028/151‑1 (MQ=255)

         ccTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTc                                                                                                        >  1:1047039/1‑151 (MQ=255)

          cTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCa                                                                                                       >  1:3447391/1‑151 (MQ=255)

            gCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAAt                                                                                                     >  1:725938/1‑151 (MQ=255)

            gCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAAt                                                                                                     <  1:25945/151‑1 (MQ=255)

              ttcttAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAAttt                                                                                                   <  1:1355352/151‑1 (MQ=255)

              ttcttAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAAttt                                                                                                   <  1:1405521/151‑1 (MQ=255)

               tcttAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAAtttt                                                                                                  <  1:1957434/151‑1 (MQ=255)

                 ttAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTtat                                                                                                <  1:193181/151‑1 (MQ=255)

                 ttAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTtat                                                                                                <  1:1434896/151‑1 (MQ=255)

                  tAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTtata                                                                                               <  1:2318667/151‑1 (MQ=255)

                  tAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTtata                                                                                               <  1:2602904/151‑1 (MQ=255)

                   aaaaTCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATaa                                                                                              <  1:3318857/151‑1 (MQ=255)

                    aaaTCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAAt                                                                                             <  1:2726034/151‑1 (MQ=255)

                    aaaTCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAAt                                                                                             >  1:2664604/1‑151 (MQ=255)

                         cTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATTTATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATAc                                                                                        >  1:2780217/1‑151 (MQ=255)

                         cTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATAc                                                                                        <  1:3184310/151‑1 (MQ=255)

                         cTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATAc                                                                                        <  1:497227/151‑1 (MQ=255)

                          ttCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACa                                                                                       <  1:202575/151‑1 (MQ=255)

                          ttCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACa                                                                                       <  1:1978850/151‑1 (MQ=255)

                           tCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACaa                                                                                      <  1:352504/151‑1 (MQ=255)

                           tCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACaa                                                                                      <  1:2779787/151‑1 (MQ=255)

                           tCAAAGCAAGAAATTTATCCATAAGTCCTACAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCAATTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATGCaa                                                                                      <  1:107484/151‑1 (MQ=11)

                             aaaGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAAt                                                                                    >  1:1243660/1‑151 (MQ=255)

                             aaaGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAAt                                                                                    >  1:739316/1‑151 (MQ=255)

                             aaaGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAAt                                                                                    >  1:1436270/1‑151 (MQ=255)

                              aaGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATc                                                                                   <  1:2112351/151‑1 (MQ=255)

                              aaGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATc                                                                                   >  1:657833/1‑151 (MQ=255)

                              aaGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATc                                                                                   <  1:1536911/151‑1 (MQ=255)

                              aaGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATc                                                                                   <  1:1617152/151‑1 (MQ=255)

                              aaGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATc                                                                                   >  1:1794190/1‑151 (MQ=255)

                                 cAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCaa                                                                                <  1:2923357/151‑1 (MQ=255)

                                 cAAGAAATTTATCCATAAGCCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCaa                                                                                >  1:2019906/1‑151 (MQ=255)

                                  aaGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCaaa                                                                               >  1:1036656/1‑151 (MQ=255)

                                   aGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAg                                                                              >  1:1020503/1‑151 (MQ=255)

                                      aaTTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGAtt                                                                           <  1:2061632/151‑1 (MQ=255)

                                      aaTTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGAtt                                                                           >  1:2692219/1‑151 (MQ=255)

                                       aTTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCTAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGAttt                                                                          <  1:2856932/151‑1 (MQ=255)

                                        tttATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGAtttt                                                                         >  1:2093238/1‑151 (MQ=255)

                                          tATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTc                                                                       >  1:1134909/1‑151 (MQ=255)

                                           aTCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTcc                                                                      >  1:637299/1‑151 (MQ=255)

                                            tCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCct                                                                     >  1:964279/1‑151 (MQ=255)

                                             ccATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCctc                                                                    <  1:1313178/151‑1 (MQ=255)

                                             ccATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCctc                                                                    >  1:1767386/1‑151 (MQ=255)

                                              cATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCctct                                                                   >  1:225576/1‑151 (MQ=255)

                                               aTAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCtt                                                                  <  1:2893913/151‑1 (MQ=255)

                                               aTAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCtt                                                                  <  1:1866620/151‑1 (MQ=255)

                                                tAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCttt                                                                 <  1:2553995/151‑1 (MQ=255)

                                                tAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCttt                                                                 <  1:659678/151‑1 (MQ=255)

                                                   gTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCtttttt                                                              >  1:1023463/1‑151 (MQ=255)

                                                   gTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCtttttt                                                              <  1:2470861/151‑1 (MQ=255)

                                                    tCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTc                                                             >  1:576382/1‑151 (MQ=255)

                                                    tCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTc                                                             <  1:713176/151‑1 (MQ=255)

                                                      cTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCtt                                                           >  1:908426/1‑151 (MQ=255)

                                                      cTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCtt                                                           <  1:848399/151‑1 (MQ=255)

                                                      cTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCtt                                                           >  1:2607975/1‑151 (MQ=255)

                                                        tCAGATAATTCCTTCGGACCACTGTATTTCATATATTCCAGCATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACCAATTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGt                                                         >  1:292674/1‑151 (MQ=11)

                                                        tCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGt                                                         >  1:3145383/1‑151 (MQ=255)

                                                              aaTTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTc                                                   >  1:2584760/1‑151 (MQ=255)

                                                                 tcattcggaaatctGTATTTCATATTTTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCTGACAGCTTATATATAGGTTGAACTTTAACACTTTCATTTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTACACTcccc                                                >  1:1616366/12‑150 (MQ=11)

                                                                 tCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCa                                                >  1:1640295/1‑151 (MQ=255)

                                                                 tCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCa                                                <  1:3128924/151‑1 (MQ=255)

                                                                    ttCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCaaaa                                             <  1:2814758/151‑1 (MQ=255)

                                                                     tCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCaaaaa                                            <  1:1903271/151‑1 (MQ=255)

                                                                     tCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCaaaaa                                            >  1:1625328/1‑151 (MQ=255)

                                                                       ggACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAAct                                          >  1:2039900/1‑151 (MQ=255)

                                                                             ctGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTta                                    <  1:2034705/151‑1 (MQ=255)

                                                                              tGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTtat                                   >  1:453142/1‑151 (MQ=255)

                                                                               gTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTtata                                  <  1:210342/151‑1 (MQ=255)

                                                                                  tttCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATAttt                               <  1:1222382/151‑1 (MQ=255)

                                                                                  tttCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATAttt                               >  1:46762/1‑151 (MQ=255)

                                                                                   ttCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATAtttt                              <  1:1861871/151‑1 (MQ=255)

                                                                                      atatatTCCAGTATCTGCGCTCTTAAATCCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTaa                           <  1:2366114/151‑1 (MQ=255)

                                                                                       tatatTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAAc                          <  1:1308974/151‑1 (MQ=255)

                                                                                             ccAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTc                    >  1:1864474/1‑151 (MQ=255)

                                                                                              cAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTcc                   <  1:1627574/151‑1 (MQ=255)

                                                                                               aGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCg                  >  1:881750/1‑151 (MQ=255)

                                                                                                gTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGa                 >  1:1539648/1‑151 (MQ=255)

                                                                                                  aTCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGAtt               >  1:1326474/1‑151 (MQ=255)

                                                                                                   tCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTc              >  1:508925/1‑151 (MQ=255)

                                                                                                      gcgcTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCAtt           >  1:1337125/1‑151 (MQ=255)

                                                                                                         ctctTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAATTCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGTTTCATTTAt        >  1:1552983/1‑151 (MQ=11)

                                                                                                         ctctTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTAt        <  1:155604/151‑1 (MQ=19)

                                                                                                          tctTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATg       >  1:2873227/1‑151 (MQ=16)

                                                                                                           ctTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATgg      >  1:3048196/1‑151 (MQ=16)

                                                                                                            ttAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGgt     <  1:2907332/151‑1 (MQ=12)

                                                                                                             tAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGgtg    <  1:403499/151‑1 (MQ=9)

                                                                                                              aaaaCCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGgtgt   <  1:435811/151‑1 (MQ=9)

                                                                                                               aaaCCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGGTGTc  >  1:3093251/1‑151 (MQ=2)

                                                                                                               aaaCCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGGTGTc  <  1:511452/151‑1 (MQ=2)

                                                                                                               aaaCCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGGTGTc  >  1:2768212/1‑151 (MQ=2)

AAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGCTCCGACAGGTTATATATTGGCTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGGTGTC  >  CP002416/2940922‑2941183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`