BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP002416	2,941,043	C→T	intergenic (‑2909/+748)	Clo1313_2511 ← / ← Clo1313_2515	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP002416	2,941,043	0	C	T	100.0%	453.4 / NA	131	intergenic (‑2909/+748)	Clo1313_2511/Clo1313_2515	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (64/67); total (64/67)

Only 100 of 131 total aligned reads displayed.

CTTGTCAACATCAAGCTTCTCCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGCTCCGACAGGTTATATATTGGCTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGGTGTC  >  CP002416/2940896‑2941183

 ttGTCAACATCAAGCTTCTCCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCg                                                                                                                                          <  1:445899/151‑1 (MQ=25)

   gTCAACATCAAGCTTCTCCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGAc                                                                                                                                        <  1:3398064/151‑1 (MQ=25)

     cAACATCAAGCTTCTCCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAg                                                                                                                                      <  1:951727/151‑1 (MQ=25)

      aaCATCAAGCTTCTCCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAgg                                                                                                                                     >  1:2883818/1‑151 (MQ=25)

      aaCATCAAGCTTCTCCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAgg                                                                                                                                     <  1:2978176/151‑1 (MQ=25)

            aaGCTTCTCCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTtatat                                                                                                                               >  1:2531485/1‑151 (MQ=25)

            aaGCTTCTCCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTtatat                                                                                                                               <  1:785412/151‑1 (MQ=25)

              gCTTCTCCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTatatat                                                                                                                             >  1:633442/1‑151 (MQ=25)

                ttCTCCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTg                                                                                                                           >  1:431484/1‑151 (MQ=25)

                ttCTCCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTg                                                                                                                           >  1:1046827/1‑151 (MQ=25)

                 tctcCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTgg                                                                                                                          <  1:578110/151‑1 (MQ=25)

                 tctcCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTgg                                                                                                                          <  1:2461469/151‑1 (MQ=25)

                   tcCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTggtt                                                                                                                        >  1:838966/1‑149 (MQ=18)

                          aaaTATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACttt                                                                                                                 <  1:478428/151‑1 (MQ=12)

                           aaTATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTa                                                                                                                <  1:2658835/151‑1 (MQ=12)

                             tatCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAAc                                                                                                              >  1:1878642/1‑151 (MQ=16)

                             tatCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAAc                                                                                                              >  1:707599/1‑151 (MQ=16)

                             tatCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAAc                                                                                                              >  1:1861872/1‑151 (MQ=16)

                                  gCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACAtttt                                                                                                         <  1:2558571/151‑1 (MQ=255)

                                   ccTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTc                                                                                                        <  1:1340028/151‑1 (MQ=255)

                                    cTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCa                                                                                                       <  1:3376640/151‑1 (MQ=255)

                                    cTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCa                                                                                                       >  1:3447391/1‑151 (MQ=255)

                                      gCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAAt                                                                                                     >  1:725938/1‑151 (MQ=255)

                                      gCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAAt                                                                                                     >  1:1574966/1‑151 (MQ=255)

                                      gCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAAt                                                                                                     <  1:25945/151‑1 (MQ=255)

                                        ttcttAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAAttt                                                                                                   <  1:1355352/151‑1 (MQ=255)

                                        ttcttAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAAttt                                                                                                   <  1:1405521/151‑1 (MQ=255)

                                         tcttAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAAtttt                                                                                                  <  1:1957434/151‑1 (MQ=255)

                                         tcttAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAAtttt                                                                                                  <  1:3032675/151‑1 (MQ=255)

                                           ttAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTtat                                                                                                <  1:1434896/151‑1 (MQ=255)

                                           ttAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTtat                                                                                                <  1:193181/151‑1 (MQ=255)

                                            tAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTtata                                                                                               <  1:2318667/151‑1 (MQ=255)

                                             aaaaTCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATaa                                                                                              >  1:1245560/1‑151 (MQ=255)

                                             aaaaTCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATaa                                                                                              <  1:3318857/151‑1 (MQ=255)

                                              aaaTCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAAt                                                                                             <  1:2726034/151‑1 (MQ=255)

                                                   cTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATAc                                                                                        <  1:3184310/151‑1 (MQ=255)

                                                    ttCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACa                                                                                       <  1:1978850/151‑1 (MQ=255)

                                                     tCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACaa                                                                                      <  1:352504/151‑1 (MQ=255)

                                                     tCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACaa                                                                                      <  1:2779787/151‑1 (MQ=255)

                                                     tCAAAGCAAGAAATTTATCCATAAGTCCTACAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCAATTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATGCaa                                                                                      <  1:107484/151‑1 (MQ=11)

                                                       aaaGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAAt                                                                                    >  1:1436270/1‑151 (MQ=255)

                                                        aaGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATc                                                                                   <  1:1617152/151‑1 (MQ=255)

                                                        aaGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATc                                                                                   <  1:2112351/151‑1 (MQ=255)

                                                        aaGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATc                                                                                   >  1:657833/1‑151 (MQ=255)

                                                        aaGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATc                                                                                   <  1:1536911/151‑1 (MQ=255)

                                                           cAAGAAATTTATCCATAAGCCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCaa                                                                                >  1:2019906/1‑151 (MQ=255)

                                                            aaGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCaaa                                                                               >  1:1036656/1‑151 (MQ=255)

                                                             aGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAg                                                                              >  1:1020503/1‑151 (MQ=255)

                                                               aaaTTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGAt                                                                            <  1:1803057/151‑1 (MQ=255)

                                                                aaTTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGAtt                                                                           <  1:2061632/151‑1 (MQ=255)

                                                                aaTTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGAtt                                                                           >  1:2692219/1‑151 (MQ=255)

                                                                 aTTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCTAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGAttt                                                                          <  1:2856932/151‑1 (MQ=255)

                                                                  tttATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGAtttt                                                                         >  1:2093238/1‑151 (MQ=255)

                                                                    tATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTc                                                                       >  1:1134909/1‑151 (MQ=255)

                                                                     aTCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTcc                                                                      >  1:637299/1‑151 (MQ=255)

                                                                      tCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCct                                                                     >  1:964279/1‑151 (MQ=255)

                                                                       ccATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCctc                                                                    >  1:1767386/1‑151 (MQ=255)

                                                                       ccATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCctc                                                                    <  1:1313178/151‑1 (MQ=255)

                                                                        cATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCctct                                                                   >  1:225576/1‑151 (MQ=255)

                                                                        cATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCctct                                                                   >  1:2657176/1‑151 (MQ=255)

                                                                         aTAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCtt                                                                  <  1:2893913/151‑1 (MQ=255)

                                                                             gTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCtttttt                                                              >  1:1023463/1‑151 (MQ=255)

                                                                             gTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCtttttt                                                              <  1:2470861/151‑1 (MQ=255)

                                                                              tCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTc                                                             >  1:576382/1‑151 (MQ=255)

                                                                              tCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTc                                                             <  1:713176/151‑1 (MQ=255)

                                                                                cTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCtt                                                           >  1:908426/1‑151 (MQ=255)

                                                                                cTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCtt                                                           >  1:2607975/1‑151 (MQ=255)

                                                                                cTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCtt                                                           <  1:848399/151‑1 (MQ=255)

                                                                                  tCAGATAATTCCTTCGGACCACTGTATTTCATATATTCCAGCATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACCAATTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGt                                                         >  1:292674/1‑151 (MQ=11)

                                                                                  tCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGt                                                         >  1:3145383/1‑151 (MQ=255)

                                                                                   cAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTc                                                        >  1:2794256/1‑151 (MQ=255)

                                                                                        aaTTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTc                                                   >  1:2584760/1‑151 (MQ=255)

                                                                                           tcattcggaaatctGTATTTCATATTTTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCTGACAGCTTATATATAGGTTGAACTTTAACACTTTCATTTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTACACTcccc                                                >  1:1616366/12‑150 (MQ=11)

                                                                                           tCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCa                                                <  1:3128924/151‑1 (MQ=255)

                                                                                           tCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCa                                                >  1:1640295/1‑151 (MQ=255)

                                                                                              ttCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCaaaa                                             <  1:2814758/151‑1 (MQ=255)

                                                                                               tCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCaaaaa                                            <  1:1903271/151‑1 (MQ=255)

                                                                                                tggACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAAc                                           >  1:2370813/2‑151 (MQ=255)

                                                                                                 ggACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAAct                                          >  1:2039900/1‑151 (MQ=255)

                                                                                                       ctGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTta                                    <  1:2034705/151‑1 (MQ=255)

                                                                                                         gTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTtata                                  <  1:210342/151‑1 (MQ=255)

                                                                                                            tttCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATAttt                               <  1:1222382/151‑1 (MQ=255)

                                                                                                            tttCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATAttt                               >  1:46762/1‑151 (MQ=255)

                                                                                                             ttCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATAtttt                              <  1:1861871/151‑1 (MQ=255)

                                                                                                                atatatTCCAGTATCTGCGCTCTTAAATCCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTaa                           <  1:2366114/151‑1 (MQ=255)

                                                                                                                 tatatTCCAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAAc                          <  1:1308974/151‑1 (MQ=255)

                                                                                                                       ccAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTc                    >  1:1864474/1‑151 (MQ=255)

                                                                                                                        cAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTcc                   >  1:491234/1‑151 (MQ=255)

                                                                                                                        cAGTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTcc                   <  1:1627574/151‑1 (MQ=255)

                                                                                                                          gTATCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGa                 >  1:1539648/1‑151 (MQ=255)

                                                                                                                             tCTGCGCTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTc              >  1:508925/1‑151 (MQ=255)

                                                                                                                                gcgcTCTTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCAtt           >  1:1337125/1‑151 (MQ=255)

                                                                                                                                   ctctTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAATTCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGTTTCATTTAt        >  1:1552983/1‑151 (MQ=11)

                                                                                                                                   ctctTAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTAt        <  1:1429891/151‑1 (MQ=19)

                                                                                                                                      ttAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGgt     <  1:2907332/151‑1 (MQ=12)

                                                                                                                                       tAAAACCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGgtg    <  1:403499/151‑1 (MQ=9)

                                                                                                                                        aaaaCCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGgtgt   <  1:435811/151‑1 (MQ=9)

                                                                                                                                         aaaCCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGGTGTc  >  1:3093251/1‑151 (MQ=2)

                                                                                                                                         aaaCCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGGTGTc  >  1:2768212/1‑151 (MQ=2)

                                                                                                                                         aaaCCTCCGGTTCCGACAGGTTATATATTGGTTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGGTGTc  <  1:511452/151‑1 (MQ=2)

CTTGTCAACATCAAGCTTCTCCTTTAAAATATCAGCCTGCTTCTTAAAATCCTTCAAAGCAAGAAATTTATCCATAAGTCCTTCAGACAATTCCTTCGGACCTCTGTATTTCATATATTCCAGTATCTGCGCTCTTAAAACCTCCGGCTCCGACAGGTTATATATTGGCTGAACTTTAACATTTTCAATTTTATAATCATACAAATCCAAAGATTTTTCCTCTTTTTTCTTGTCCACTCCCAAAAACTTCTTTATATTTTTAACGGTTTCCGATTCATTTATGGTGTC  >  CP002416/2940896‑2941183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`