Predicted mutation
evidence seq id position mutation annotation gene description
RA CP002416 1,989,635 C→T M607I (ATG→ATA)  Clo1313_1697 ← protein of unknown function DUF214

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0024161,989,6350CT99.3% 548.9 / ‑3.8 138M607I (ATG→ATA) Clo1313_1697protein of unknown function DUF214
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (71/66);  minor base A (0/1);  total (71/67)
Fisher's exact test for biased strand distribution p-value = 4.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.75e-01

Only 100 of 138 total aligned reads displayed.

GTACACTGTCAGTCACACCGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTCATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCTAAGTCAGTTTC  >  CP002416/1989490‑1989781
                                                                                                                                                 |                                                                                                                                                  
gTACACTGTCAGTCACACCGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGa                                                                                                                                               >  1:960668/1‑151 (MQ=255)
  acacTGTCAGTCACACCGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAAt                                                                                                                                             <  1:2502341/151‑1 (MQ=255)
   cacTGTCAGTCACACCGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATc                                                                                                                                            <  1:486230/151‑1 (MQ=255)
    acTGTCAGTCACACCGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCa                                                                                                                                           <  1:636365/151‑1 (MQ=255)
    acTGTCAGTCACACCGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCa                                                                                                                                           <  1:1352537/151‑1 (MQ=255)
         cagtcaCACCGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACcac                                                                                                                                      >  1:2350319/1‑151 (MQ=255)
         cagtcaCACCGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACcac                                                                                                                                      >  1:1985942/1‑151 (MQ=255)
            tcaCACCGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAAc                                                                                                                                   >  1:3027696/1‑151 (MQ=255)
            tcaCACCGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAAc                                                                                                                                   >  1:2028484/1‑151 (MQ=255)
            tcaCACCGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAAc                                                                                                                                   <  1:640509/151‑1 (MQ=255)
             cacaCCGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACg                                                                                                                                  >  1:1343666/1‑151 (MQ=255)
               cacCGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGc                                                                                                                                <  1:691379/151‑1 (MQ=255)
                 ccGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCAt                                                                                                                              >  1:768805/1‑151 (MQ=255)
                   gACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGc                                                                                                                            >  1:1061280/1‑151 (MQ=255)
                      aaTATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGt                                                                                                                         <  1:522297/151‑1 (MQ=255)
                           cAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGGCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGtt                                                                                                                    <  1:3465608/151‑1 (MQ=255)
                            aaTCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTg                                                                                                                   <  1:2840451/151‑1 (MQ=255)
                            aaTCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTg                                                                                                                   <  1:1693573/151‑1 (MQ=255)
                            aaTCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCAGGCGGTACGTTg                                                                                                                   <  1:1370961/151‑1 (MQ=255)
                                 tttCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAAtt                                                                                                              >  1:3248186/1‑151 (MQ=255)
                                  ttCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAAttt                                                                                                             <  1:1483382/151‑1 (MQ=255)
                                    ctcCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCt                                                                                                           >  1:1245334/1‑151 (MQ=255)
                                    ctcCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCt                                                                                                           >  1:1753234/1‑151 (MQ=255)
                                    ctcCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCt                                                                                                           >  1:1890618/1‑151 (MQ=255)
                                     tcCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTa                                                                                                          >  1:688722/1‑151 (MQ=255)
                                     tcCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTa                                                                                                          >  1:1273516/1‑151 (MQ=255)
                                           cGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTa                                                                                                    <  1:595301/151‑1 (MQ=255)
                                            gCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTAt                                                                                                   <  1:2359401/151‑1 (MQ=255)
                                             cATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTAtt                                                                                                  >  1:1572502/1‑151 (MQ=255)
                                             cATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTAtt                                                                                                  >  1:880579/1‑151 (MQ=255)
                                              aTCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACTGCATGCGGTACGTTGGAATTTCTATTTGTATTa                                                                                                 >  1:601249/1‑151 (MQ=255)
                                              aTCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTa                                                                                                 <  1:533958/151‑1 (MQ=255)
                                              aTCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTa                                                                                                 <  1:960669/151‑1 (MQ=255)
                                              aTCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTa                                                                                                 <  1:2138987/151‑1 (MQ=255)
                                                ccTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACt                                                                                               >  1:2348953/1‑151 (MQ=255)
                                                 ctctctTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTg                                                                                              >  1:3140798/1‑151 (MQ=255)
                                                  tctctTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTgg                                                                                             >  1:1630052/1‑151 (MQ=255)
                                                   ctctTTCTTGCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGc                                                                                            <  1:1046705/151‑1 (MQ=255)
                                                     ctttctttCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTa                                                                                          >  1:2166657/1‑151 (MQ=255)
                                                     ctttctttCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTa                                                                                          <  1:1203815/151‑1 (MQ=255)
                                                     ctttctttCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTa                                                                                          <  1:2658353/151‑1 (MQ=255)
                                                          tttcAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGaa                                                                                     >  1:297289/1‑151 (MQ=255)
                                                          tttcAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGaa                                                                                     <  1:2503277/151‑1 (MQ=255)
                                                              aGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATtct                                                                                 >  1:2482685/1‑151 (MQ=255)
                                                               gCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATtctc                                                                                >  1:1083129/1‑151 (MQ=255)
                                                                     ccACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAg                                                                          >  1:31209/1‑151 (MQ=255)
                                                                      cACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGa                                                                         <  1:2698002/151‑1 (MQ=255)
                                                                      cACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGa                                                                         <  1:545323/151‑1 (MQ=255)
                                                                             atatCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATAttttt                                                                  >  1:1628805/1‑151 (MQ=255)
                                                                             atatCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATAttttt                                                                  >  1:1371864/1‑151 (MQ=255)
                                                                                   tGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACg                                                            <  1:2765982/151‑1 (MQ=255)
                                                                                     aaTTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTg                                                          <  1:2106268/151‑1 (MQ=255)
                                                                                      aTTCCTTCGTCAAGAAGGTTGAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGa                                                         <  1:1319969/151‑1 (MQ=255)
                                                                                       ttCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGAc                                                        >  1:2527149/1‑151 (MQ=255)
                                                                                       ttCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGAc                                                        >  1:1121431/1‑151 (MQ=255)
                                                                                         ccTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGAcat                                                      >  1:2297620/1‑151 (MQ=255)
                                                                                         ccTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGAcat                                                      >  1:654705/1‑151 (MQ=255)
                                                                                         ccTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACCTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGAcat                                                      <  1:3290792/151‑1 (MQ=255)
                                                                                          cTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGAcatc                                                     >  1:2245671/1‑151 (MQ=255)
                                                                                            tCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGAcatcat                                                   <  1:1912740/151‑1 (MQ=255)
                                                                                              gTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATcc                                                 <  1:2919748/151‑1 (MQ=255)
                                                                                                cAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCcac                                               >  1:2036053/1‑151 (MQ=255)
                                                                                                  agaagGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACaa                                             >  1:448665/1‑151 (MQ=255)
                                                                                                   gaagGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACaaa                                            >  1:2575818/1‑151 (MQ=255)
                                                                                                    aagGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAg                                           >  1:3130804/1‑151 (MQ=255)
                                                                                                          tAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAGTTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACt                                     <  1:1504336/151‑1 (MQ=255)
                                                                                                          tAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACt                                     >  1:806908/1‑151 (MQ=255)
                                                                                                          tAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACt                                     >  1:172414/1‑151 (MQ=255)
                                                                                                             aGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCgg                                  >  1:3361584/1‑151 (MQ=255)
                                                                                                                 taATGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGt                              <  1:448875/151‑1 (MQ=255)
                                                                                                                  aaTGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGtt                             <  1:2078107/151‑1 (MQ=255)
                                                                                                                   aTGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTa                            <  1:2337234/151‑1 (MQ=255)
                                                                                                                    tGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTaa                           <  1:2527150/151‑1 (MQ=255)
                                                                                                                    tGTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTaa                           <  1:1121430/151‑1 (MQ=255)
                                                                                                                     gTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAAc                          >  1:2563762/1‑151 (MQ=255)
                                                                                                                     gTTTTTTCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAAc                          <  1:28850/151‑1 (MQ=255)
                                                                                                                      ttttttCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACa                         >  1:2405889/1‑151 (MQ=255)
                                                                                                                        ttttCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAg                       <  1:369257/151‑1 (MQ=255)
                                                                                                                         tttCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGa                      <  1:1994637/151‑1 (MQ=255)
                                                                                                                          ttCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGat                     >  1:3280851/1‑151 (MQ=255)
                                                                                                                           tCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGata                    >  1:1811174/1‑151 (MQ=255)
                                                                                                                           tCTGCTGCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGata                    <  1:70027/151‑1 (MQ=255)
                                                                                                                            ctgctgCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGataa                   >  1:937114/1‑151 (MQ=255)
                                                                                                                            ctgctgCGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGataa                   >  1:1071003/1‑151 (MQ=255)
                                                                                                                             tgctgcGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGataat                  <  1:3248187/151‑1 (MQ=255)
                                                                                                                               ctgcGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAatat                <  1:506769/151‑1 (MQ=255)
                                                                                                                                tgcGCATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATAtt               <  1:463507/151‑1 (MQ=255)
                                                                                                                                  cgcATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCt             <  1:3394815/151‑1 (MQ=255)
                                                                                                                                   gcATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCTa            >  1:259174/1‑151 (MQ=255)
                                                                                                                                   gcATCATAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCTa            >  1:2494407/1‑151 (MQ=255)
                                                                                                                                    catcatAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCTaa           >  1:93349/1‑151 (MQ=255)
                                                                                                                                    catcatAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCTaa           <  1:1596170/151‑1 (MQ=255)
                                                                                                                                        atAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCTAAGTCa       <  1:2843828/151‑1 (MQ=255)
                                                                                                                                        atAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCTAAGTCa       <  1:1785692/151‑1 (MQ=255)
                                                                                                                                         tAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCTAAGTCAg      >  1:2272839/1‑151 (MQ=255)
                                                                                                                                         tAAAATTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCTAAGTCAg      >  1:3372106/1‑151 (MQ=255)
                                                                                                                                          aaaaTTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCTAAGTCAGt     >  1:2037248/1‑151 (MQ=255)
                                                                                                                                            aaTTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCTAAGTCAGttt   >  1:2770503/1‑151 (MQ=255)
                                                                                                                                             aTTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCTAAGTCAGTTTc  >  1:2560199/1‑151 (MQ=255)
                                                                                                                                             aTTTTATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCTAAGTCAGTTTc  >  1:3326498/1‑151 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
GTACACTGTCAGTCACACCGACAATATCAATCTTTTCTCCGGCCGCATCCTCTCTTTCTTTCAGCATTTCCACGGTAATATCGTGAATTCCTTCGTCAAGAAGGTTTAAAGTATAATGTTTTTTCTGCTGCGCATCATAAAATTTCATAGAATCAACCACAACGGCATGCGGTACGTTGGAATTTCTATTTGTATTACTGGCTAAAGAATTCTCTTTAAGATATTTTTCATACGTGACATCATCCACAAAGTATACTCGGATGTTAACAAGATAATATTCTAAGTCAGTTTC  >  CP002416/1989490‑1989781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑