Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP002416729,8900TG30.5% 294.6 / 16.7 132noncoding (53/75 nt)Clo1313_R0021tRNA‑Glu
Reads supporting (aligned to +/- strand):  ref base T (15/76);  new base G (40/0);  total (56/76)
Fisher's exact test for biased strand distribution p-value = 1.55e-21
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 138 total aligned reads displayed.

GGAATTCGGAATAAAAA‑CGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACG  >  CP002416/729742‑730040
                                                                                                                                                     |                                                                                                                                                         
ggAATTCGGAATAAAAAACGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGtt                                                                                                                                                          <  1:744860/151‑1 (MQ=255)
 gAATTCGGAATAAAAAACGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTc                                                                                                                                                         <  1:875306/151‑1 (MQ=255)
  aaTTCGGAATAAAAAACGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCg                                                                                                                                                        <  1:3374374/151‑1 (MQ=255)
   aTTCGGAATAAAAAACGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGa                                                                                                                                                       <  1:92591/151‑1 (MQ=255)
   aTTCGGAATAAAAAACGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGa                                                                                                                                                       <  1:1224919/151‑1 (MQ=255)
       ggAATAAAAAACGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTcc                                                                                                                                                   <  1:713452/151‑1 (MQ=255)
        aataaaaaa‑CGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTcccc                                                                                                                                                 <  1:1439300/147‑1 (MQ=255)
         ataaaaaa‑CGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCt                                                                                                                                                <  1:2188364/148‑1 (MQ=255)
         ataaaaaa‑CGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCt                                                                                                                                                >  1:1665497/4‑151 (MQ=255)
            aaaaa‑CGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑ATg                                                                                                                                            >  1:577833/1‑151 (MQ=255)
             aaaa‑CGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATgg                                                                                                                                           <  1:524997/151‑1 (MQ=255)
             aaaa‑CGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGGcccccctgg                                                                                                                                            >  1:371657/1‑146 (MQ=255)
               aa‑CGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCTCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGt                                                                                                                                         <  1:2666012/151‑1 (MQ=255)
                a‑CGAAATTTTCACTTGACATTATGAGAGGTACCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGtg                                                                                                                                        <  1:2802022/151‑2 (MQ=255)
                  cGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCa                                                                                                                                       <  1:729543/151‑1 (MQ=255)
                   gAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCAc                                                                                                                                      <  1:1533031/151‑1 (MQ=255)
                     aaTTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCa                                                                                                                                    <  1:1910766/151‑1 (MQ=255)
                          tCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCCTTATc                                                                                                                               >  1:2661665/1‑151 (MQ=255)
                           cACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCa                                                                                                                              <  1:508649/151‑1 (MQ=255)
                           cACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCa                                                                                                                              <  1:2463236/151‑1 (MQ=255)
                           cACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCa                                                                                                                              <  1:1031376/151‑1 (MQ=255)
                             cTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGGAACAGGGGTTTGAGCCCCCC‑TTGGGTCACCCTTAACAGc                                                                                                                            >  1:2508925/1‑151 (MQ=25)
                               tGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑ATGGGGCACCCTTATCAGCCt                                                                                                                          >  1:3275759/1‑151 (MQ=255)
                                  cATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCC‑ATGGGTCACCCTTATCAGCCTGTa                                                                                                                       >  1:3372606/1‑151 (MQ=255)
                                  cATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAAAAGGGGGTCGAGTCCCCT‑ATTGGGCACCCTTATCAGcccgga                                                                                                                       >  1:2416249/1‑147 (MQ=25)
                                      ttGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTg                                                                                                                   <  1:2872416/151‑1 (MQ=255)
                                      ttGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTg                                                                                                                   <  1:690845/151‑1 (MQ=255)
                                       tGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTgg                                                                                                                  <  1:1058343/151‑1 (MQ=255)
                                       tGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑ATGGGGCACCATTATCAGCCTGTATTTgg                                                                                                                  >  1:3353890/1‑151 (MQ=255)
                                       tGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑AAGGGGCCCCCTTATCAGcccggagttgg                                                                                                                  >  1:1992864/1‑142 (MQ=25)
                                       tGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAAAAGGGGTTTGAGTCCCCT‑ATGGGGCCCCATTTTCAGCCTGTTTTTgg                                                                                                                  >  1:48907/1‑151 (MQ=25)
                                         agagGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCC‑ATGGGTCACCATTATCAGCCTGTATTTgggg                                                                                                                >  1:2994765/1‑149 (MQ=255)
                                               tCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTc                                                                                                         <  1:758792/151‑1 (MQ=255)
                                               tCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑ATGGGGCCCCATTTTCAGCCTGTATTTGGGGC‑GGGTc                                                                                                         >  1:1821405/1‑151 (MQ=25)
                                               tCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCC‑ATGGGGCACCATTATCAGCCTGTATTTGGTGC‑TGGTc                                                                                                         >  1:1584354/1‑151 (MQ=255)
                                                ccGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCt                                                                                                        <  1:1230434/151‑1 (MQ=255)
                                                    cTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCa                                                                                                    <  1:2736102/151‑1 (MQ=255)
                                                     tAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAg                                                                                                   <  1:1691178/151‑1 (MQ=255)
                                                     tAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCC‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGGCTGCCAg                                                                                                   >  1:2506287/1‑151 (MQ=255)
                                                     tAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCCGTATTTTGGGC‑TGGGCTGCCAg                                                                                                   >  1:752377/1‑151 (MQ=25)
                                                     tAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAAAAGGGGGTCGAGTCCCCT‑ATGGGGCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAg                                                                                                   >  1:2719316/1‑151 (MQ=255)
                                                        aaTATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAg                                                                                                <  1:2110619/151‑1 (MQ=255)
                                                        aaTATACTGTGTCAGCGAGGTTTTAAGTTGATTGCAGGCATGGCCCATTGGTCAAGCGGTTAAGACGCCGCCCTTTTACGAAGATAGCTGGGTTTCGAGTCCCCT‑ATGGGTCACCATTTTCAGCCTGTATTTGGTGA‑TGATCTGCCAGaaa                                                                                                <  1:2977508/151‑2 (MQ=21)
                                                         atatACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGc                                                                                               <  1:2611130/151‑1 (MQ=255)
                                                           ataCTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTg                                                                                             <  1:2063808/151‑1 (MQ=255)
                                                            taCTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGt                                                                                            <  1:2764498/151‑1 (MQ=255)
                                                             aCTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGCAACAGGGGGTCGAGTCCCCC‑ATGGGGCACCCTTATCAGCCCGTATTTGGGGG‑TGGTCTGCCCGAAGCTGtt                                                                                           >  1:237098/1‑151 (MQ=21)
                                                              cTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGttt                                                                                          <  1:865361/151‑1 (MQ=255)
                                                              cTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTTGGGC‑TGGTCTGCCAGAAGCTGttt                                                                                          >  1:1131458/1‑151 (MQ=255)
                                                                gtgtCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGGGG‑TGGTCTGCCAGAAGCTGTTTAt                                                                                        >  1:2235988/1‑151 (MQ=255)
                                                                  gtCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑g                                                                                     <  1:452374/151‑1 (MQ=255)
                                                                   tCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑Gc                                                                                    <  1:227150/151‑1 (MQ=255)
                                                                   tCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAAAAGGGGGTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGGGC‑TGGGCTGCCAGAAggcgcttatcgc                                                                                     >  1:1069629/1‑140 (MQ=21)
                                                                    cAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCt                                                                                   <  1:1001844/151‑1 (MQ=255)
                                                                        gAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCa                                                                               <  1:1451814/151‑1 (MQ=255)
                                                                        gAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCa                                                                               <  1:2948172/151‑1 (MQ=255)
                                                                          ggTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑ATGGGGCACCATTATCAGCCCGTATTTGGGGC‑TGGGCTGCCAGAAGCTGTTTATC‑GCTGGCAGa                                                                             >  1:2769155/1‑151 (MQ=25)
                                                                               tAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑CTGGGTTACCCTTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGt                                                                        >  1:83015/1‑151 (MQ=255)
                                                                                aaGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTa                                                                       <  1:699197/151‑1 (MQ=255)
                                                                                  gTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAgg                                                                     <  1:2512982/151‑1 (MQ=255)
                                                                                    tGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCa                                                                   <  1:1744603/151‑1 (MQ=255)
                                                                                    tGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCa                                                                   <  1:2177468/151‑1 (MQ=255)
                                                                                        ttCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTc                                                               <  1:247951/151‑1 (MQ=255)
                                                                                            gACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCaaaa                                                           <  1:583739/151‑1 (MQ=255)
                                                                                            gACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCaaaa                                                           <  1:2596492/151‑1 (MQ=255)
                                                                                            gACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAAAAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCCGTTTATC‑GCTTGCAGACCCGTAGGGAGGTCaaaa                                                           >  1:1927028/1‑151 (MQ=25)
                                                                                             aCATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCC‑ATGGGGCACCATTATCCGCCTGTATTTGGTGC‑TGGGCTGCCAGAAGCTGTTTATC‑CCTGGCAGAACAGTAGGCCGGGCaaaaa                                                          >  1:2696824/1‑151 (MQ=21)
                                                                                             aCATGGCCCATTGGTCAAGCGGCTAAGACCCCGCCCTTTCACGGCGGTCACAGGGGGTCCAGTCCCCG‑ATGCGTCACCCTTATCCGCCCCTATTTTGTGC‑CGGGCTGCCACAATCGGTTTATT‑GTTGGCAGATCAGTAGGCAAGTCcaaaa                                                          >  1:2805552/1‑151 (MQ=255)
                                                                                              cATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGGGGCCCCC‑CTGGGTCACCACTATCAGCCTGTATTTGGTGC‑TGGGCTGCCAGAAGCGGGTTATC‑GCCGGCAGACCCGGAGGCAGGGCAAaaag                                                         >  1:211894/1‑151 (MQ=18)
                                                                                                tGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCaaaaaaaa                                                       >  1:2804454/1‑148 (MQ=255)
                                                                                                  gCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAaaagaaag                                                     <  1:2668075/151‑1 (MQ=255)
                                                                                                    ccATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGc                                                   >  1:295001/1‑151 (MQ=255)
                                                                                                    ccATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑ATGGGTCCCCATTATCAGCCTGTATTTTGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGGCAAAAAGAAAGGc                                                   >  1:1129036/1‑151 (MQ=37)
                                                                                                    ccATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑ATGGGTCCCCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTTGGCAGGTCAAAAAGAAAGGc                                                   >  1:823699/1‑151 (MQ=255)
                                                                                                    ccATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑ATGGGGCACCATTATCAGCCTGTATTTGGTGC‑TGGGCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAaaagaaaagc                                                   >  1:2675365/1‑148 (MQ=255)
                                                                                                     cATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCa                                                  <  1:3461446/151‑1 (MQ=255)
                                                                                                      aTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCaa                                                 <  1:2239987/151‑1 (MQ=255)
                                                                                                      aTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCaa                                                 <  1:950947/151‑1 (MQ=255)
                                                                                                        tGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCC‑ATGGGTCCCCATTATCAGCCTGTCTTTTGTGCCTGG‑CTTCCCGAAGCCGTTTATC‑GCTGGCAGACCAGTAGGCCGGGCCAAAAGAAAgggcaac                                               >  1:1892494/1‑146 (MQ=18)
                                                                                                         ggTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTTCCCC‑ATGGGTTACCATTATCAGCCTGTATTTGGTGC‑CGGTCTGCCAGAAGCTGTTTATC‑GCTGGCCGACCAGTTGGCAGGTCAAAAAGAAAAGCAaaca                                              >  1:1866215/1‑151 (MQ=25)
                                                                                                             aaGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCC‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGGAGGCAGGGCAAAAAGAAAGGCAAacaacaa                                          >  1:3034660/1‑150 (MQ=37)
                                                                                                                 ggTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑ATGGGTCCCCATTATCAGCCCGTATTTGGGGC‑TGGTCTGCCCGAAGCTGTTTATC‑GCTGGCCGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGcc                                      >  1:2383419/1‑151 (MQ=37)
                                                                                                                     aaGACACCGCCCTTTCACGGCGGTAACAGGGGGCTGAGTCCCCCCATGG‑TCACCATTCCCAACCTGCAATTTGCGC‑TGGTCTGTCAGAAGCTGGTCATCTACTG‑CAGGCCAGTAGGCCGGTCAAAAAAAAAGGCcaacaaaactgtatgcg                                  >  1:1555997/1‑140 (MQ=255)
                                                                                                                      aGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTa                                 <  1:2960193/151‑1 (MQ=255)
                                                                                                                      aGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAGTCCCCT‑ATTGGTCCCCCTTATCCGCCCGTATTTTGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCCGTAGGCAGGGCAAAAAAAAAAGCAAACAACATGGCCCGGTa                                 >  1:1221271/1‑151 (MQ=25)
                                                                                                                       gACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAg                                <  1:1660247/151‑1 (MQ=255)
                                                                                                                       gACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAg                                <  1:3315712/151‑1 (MQ=255)
                                                                                                                            cGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAGTTCAg                           <  1:2886171/151‑1 (MQ=255)
                                                                                                                               ccTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAGTTCAGTTg                        <  1:1035147/151‑1 (MQ=255)
                                                                                                                                   tCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAGTTCAGTTGGTTa                    <  1:2769919/151‑1 (MQ=255)
                                                                                                                                     aCGGCGGTAACAGGGGGTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCCGAAGCTGTTTATC‑CCCGGCAGACCAGTAGGCAGGGCAAAAAGAAAAGCAAACAACATGGCCCGGGAGGTCAGGTGGGTAGa                  >  1:2113459/1‑151 (MQ=255)
                                                                                                                                       ggcggTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAGTTCAGTTGGTTAGAAt                >  1:204658/1‑151 (MQ=255)
                                                                                                                                       ggcggTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCCGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAGTTCAGTTGGTTAgcat                >  1:1875102/1‑148 (MQ=255)
                                                                                                                                           gTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAGTTCAGTTGGTTAGAATGCCa            <  1:716321/151‑1 (MQ=255)
                                                                                                                                           gTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAGTTCAGTTGGTTAGAATGCCa            >  1:1253504/1‑151 (MQ=255)
                                                                                                                                            tAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAGTTCAGTTGGTTAGAATGCCAg           <  1:1057652/151‑1 (MQ=255)
                                                                                                                                            tAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAGTTCAGTTGGTTAGAATGCCAg           <  1:1564752/151‑1 (MQ=255)
                                                                                                                                                  gggTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTc     <  1:1505172/151‑1 (MQ=255)
                                                                                                                                                   ggTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCa    <  1:952611/151‑1 (MQ=255)
                                                                                                                                                     ttCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACg  <  1:2750717/151‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                         
GGAATTCGGAATAAAAA‑CGAAATTTTCACTTGACATTTTGAGAGGTTCCGGCTAAAATATACTGTGTCAGCGAGGTTTTAAGTTGATTTCAGACATGGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCT‑ATGGGTCACCATTATCAGCCTGTATTTGGTGC‑TGGTCTGCCAGAAGCTGTTTATC‑GCTGGCAGACCAGTAGGCAGGTCAAAAAGAAAGGCAAACAACATGGCCCGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACG  >  CP002416/729742‑730040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑