Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0024163,232,4740AC36.8% 252.9 / 43.6 136V255G (GTT→GGT) Clo1313_2749hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (81/5);  new base C (0/50);  total (81/55)
Fisher's exact test for biased strand distribution p-value = 7.01e-32
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 148 total aligned reads displayed.

ACCAATTCTTCAAAATTTATTTCACTGCCGGCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCTTCCCCTATTTTGCCGCCATCTTCAC  >  CP002416/3232324‑3232624
                                                                                                                                                         |                                                                                                                                                        
accaATTCTTCAAAATTTATTTCACTGCCGGCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGaaa                                                                                                                                                          <  1:1551695/151‑1 (MQ=255)
  caATTCTTCAAAATTTATTTCACTGCCGGCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAAcc                                                                                                                                                        >  1:206745/1‑151 (MQ=255)
   aaTTCTTCAAAATTTATTTCACTGCCGGCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAAccc                                                                                                                                                       >  1:381352/1‑151 (MQ=255)
      tcttcAAAATTTATTTCACTGCCGGCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑Gc                                                                                                                                                   >  1:1352493/1‑151 (MQ=255)
         tcAAAATTTATTTCACTGCCGGCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCAc                                                                                                                                                >  1:221398/1‑151 (MQ=255)
          cAAAATTTATTTCACTGCCGGCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACg                                                                                                                                               >  1:1849186/1‑151 (MQ=255)
            aaaTTTATTTCACTGCCGGCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGAc                                                                                                                                             >  1:444976/1‑151 (MQ=255)
                 tttttCCCTGCCGTCTTTTCTTTTTTCCCCAACCTCATTTTTCCTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑ACCTCCATCCCCACCCCCAATTTTTTTTTTTCTCCCA‑TCACCGTCAAAACCCCC‑GCCACGACCGttt                                                                                                                                        <  1:2771784/149‑1 (MQ=255)
                 tatttCACTGCCGGCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGttt                                                                                                                                        >  1:1117953/1‑151 (MQ=255)
                  atttCACTGCCGGCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGtttt                                                                                                                                       >  1:503359/1‑151 (MQ=255)
                           ccGGCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACaa                                                                                                                              >  1:1142760/1‑151 (MQ=255)
                            cggtttttcttttATTCCCAAACTCATCTTTACTTCCAGTTTCATTTTCTTTTTCTTTTTC‑ATTCTTATCTTC‑ACCTTCATTCCCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAAt                                                                                                                             <  1:3019218/147‑1 (MQ=255)
                            cGGCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAAt                                                                                                                             >  1:3042269/1‑151 (MQ=255)
                            cGGCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAAt                                                                                                                             >  1:3224720/1‑151 (MQ=255)
                             ggCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATg                                                                                                                            >  1:171286/1‑151 (MQ=255)
                               ttttttttttATCCCCAAACTCATCTTTACTTTCAGTTTCTTTTTCTTTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCACCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGt                                                                                                                          <  1:1938609/150‑1 (MQ=255)
                                 tttcttttATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTAt                                                                                                                        >  1:2212267/1‑151 (MQ=255)
                                   ttttttATTCCCAACCTCTTTTTTCCTTTCATTTTCATTTTCATTTT‑TTTTTC‑CTTTTTTTTTTCCAGCATCACCCTCCCCCTCATTTTTTTTTTTTCTCTCA‑TCTTCGCAAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCa                                                                                                                      <  1:688910/149‑1 (MQ=255)
                                   tcttttTTTCCCAAACTCATTTTTTCTTTCTTTTTCTTTTTCATTTTCTTTTTC‑TTTCTTATCTTC‑AACTCCATCCCCACCCTCAATTTTTTTTTTTCTCCCA‑TCATCGTCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCa                                                                                                                      <  1:310013/151‑1 (MQ=255)
                                       ttATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCAc                                                                                                                  >  1:1354917/1‑151 (MQ=255)
                                        tATTCCCAACCTCATCTTTCCTTTCATTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCCCAGCCTCAATTTTTTTTTTTCTCTCA‑CCATCGTCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCAcc                                                                                                                 <  1:2688281/151‑1 (MQ=255)
                                          ttCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGc                                                                                                               >  1:3149934/1‑151 (MQ=255)
                                             ccAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGctct                                                                                                            >  1:882735/1‑151 (MQ=255)
                                                  cTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTg                                                                                                       >  1:2328951/1‑151 (MQ=255)
                                                   tCATCTTTACTTTCATTTTCTTTTTCATTTTCTTTTTC‑TTTCTTATCTTC‑AACTTCATTCTCACCCTCATTTTTTGTTTTTCTCTCA‑TCATCGTCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGt                                                                                                      <  1:1573434/151‑1 (MQ=255)
                                                   tCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGt                                                                                                      >  1:1531408/1‑151 (MQ=255)
                                                         ttcctttctttttcattttcatTTTTTTTTTC‑ATTCTTATCTCC‑AACTCCATTCTCCCCCTCAATTTTTTTTTTTCTCTCA‑TCTCCGTCAAAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCtt                                                                                                <  1:1677878/141‑1 (MQ=255)
                                                         ttACTTTCAGTTTCATTTTCATTTTCTTTTTT‑ATTCTTATCTTC‑AACTCCATTCTCTTCCTCAATTTTTGTTTTTCTCTCA‑TCATTGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTTTTGGCCTCtt                                                                                                >  1:2855584/1‑151 (MQ=255)
                                                         ttACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCtt                                                                                                >  1:1094178/1‑151 (MQ=255)
                                                          ttcTTTCATTTTC‑TTTTCCTTTTTTTTTTCCATTCTTCCCTCC‑AACTTCATCCTCCCCCTCAATTTGT‑TTTTTCCCCCAACCATCGCCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCttt                                                                                               <  1:237214/149‑1 (MQ=255)
                                                            cTTTCATTTTCATTTTCTTTTTCTTTTTC‑ATTTTTACCTTC‑AACTTCATTCTCGGCCTCATTTTTTGTTTTTCTCCCA‑TCGCCGTCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTtc                                                                                             <  1:2576072/151‑1 (MQ=255)
                                                            cTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTtc                                                                                             >  1:3213813/1‑151 (MQ=255)
                                                              ttCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTtctc                                                                                           >  1:3187397/1‑151 (MQ=255)
                                                               tCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTctct                                                                                          >  1:2806976/1‑151 (MQ=255)
                                                                cAGTTTCTTTTTCATTTTCTTTTTC‑ATTCTTACCTCC‑ACCTCCATTCCCAGCCTCATTTTTTTTTTTTCTCTCA‑TCATCGTCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTg                                                                                         <  1:1257035/151‑1 (MQ=255)
                                                                 aGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGa                                                                                        >  1:279698/1‑151 (MQ=255)
                                                                   tttcattttcttTTTCTTTTTC‑ATTCTTATCTCC‑AACTTCATTCTCACCCTAATTTTTTTTTTTTCTCTCA‑TCATCGCCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAAc                                                                                      <  1:1895002/151‑1 (MQ=255)
                                                                      ctttttcttttttTTTTTC‑TTTCTTATCTCC‑AACTTCATCCTCACCCTCATTTTTTTTTTTTCTCTCT‑TCATCGTCAAAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCt                                                                                   <  1:21328/149‑1 (MQ=255)
                                                                      cattttcattttCTTTTTC‑ATTTTTATCTTC‑ACCTTCATCCCCAGCCTCATTTTTTGTTTTTCTCTCA‑TCACCGTCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCt                                                                                   <  1:1276432/151‑1 (MQ=255)
                                                                      cattttcattttCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCt                                                                                   >  1:3262895/1‑151 (MQ=255)
                                                                       tttttcttttttTTTTTC‑TTTTTTATCTTC‑AACTACATCCTCACCCTAATTTTTTTTTTTTCTCTCA‑TCATCCACAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCtt                                                                                  <  1:403818/150‑1 (MQ=255)
                                                                       tttttctttttctTTTTC‑ATTCTTACCTTC‑ACCTTCATCCTCACCCTCATTTTTTGTTTTTCTCTCA‑TCATCGTCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCtt                                                                                  <  1:405436/150‑1 (MQ=255)
                                                                       tttttcattttcTTTTTC‑ATTCTTATCTTC‑ACCTTCATTCCCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCtt                                                                                  <  1:216799/150‑1 (MQ=255)
                                                                       attttcttttttTTTTTC‑ATTCTTATCTTC‑AACTTCATCCTCAGCCTCATTTTTTTTTTTTCTCTCA‑TCAGCGTCAAAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCtt                                                                                  <  1:1134022/151‑1 (MQ=255)
                                                                        ttttcattttcTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCttt                                                                                 >  1:1600601/1‑151 (MQ=255)
                                                                         tttcattttcTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTc                                                                                >  1:1026466/1‑151 (MQ=255)
                                                                             attttcTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATc                                                                            >  1:954235/1‑151 (MQ=255)
                                                                              ttttcTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCa                                                                           >  1:132765/1‑151 (MQ=255)
                                                                                ttcTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATg                                                                         >  1:1476952/1‑151 (MQ=255)
                                                                                 tcTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGt                                                                        >  1:548609/1‑151 (MQ=255)
                                                                                    ttttC‑ATTCTTTTCTTC‑AACTTCATCCTCGCCCTCAATTTTTTTTTTTCTCTCA‑TCATCGTCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGtttt                                                                     <  1:1303521/151‑1 (MQ=255)
                                                                                    ttttC‑ATTCTTATTTTC‑AACTTCTTTCTCACCCCCATTTTTTGTTTTTCTCTCA‑CCACCGTCAAAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGtttt                                                                     <  1:2499475/151‑1 (MQ=255)
                                                                                     tttC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGttttt                                                                    >  1:3052156/1‑151 (MQ=255)
                                                                                       ttctttcttttcttC‑ACCTTCTTCCTCCGCCTCATTTTTTTTTTTTCTCTCT‑TCTTCGAAAAAGCCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGttttta                                                                   <  1:256598/147‑1 (MQ=255)
                                                                                       tC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGtttttat                                                                  >  1:2377009/1‑151 (MQ=255)
                                                                                       tC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGtttttat                                                                  >  1:211408/1‑151 (MQ=255)
                                                                                          aTTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGtttttattt                                                                >  1:2427951/1‑151 (MQ=255)
                                                                                          aTTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGtttttattt                                                                >  1:2920011/1‑151 (MQ=255)
                                                                                           ttCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGtttttatttt                                                               >  1:183074/1‑151 (MQ=255)
                                                                                             tttATCTCC‑AACTCCATCCCCACCCTCAGTTTTTGTTTTTCTCTCA‑TCGTCGTAAAAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGtttttattttt‑a                                                            <  1:1142761/150‑1 (MQ=255)
                                                                                               tATCTTC‑AACTTCATTCTCAGCCTAAATTTTTGTTTTTCTCTCA‑TCATCGTCAAAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATc                                                          <  1:3010692/151‑1 (MQ=255)
                                                                                                   ttC‑ACCTTCATTCCCACCCTCAATTTTTTTTTTTCTCTCA‑TCATCGCCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCa                                                      <  1:1511488/151‑1 (MQ=255)
                                                                                                     tcaccttcttTCTCAGCCTCAATTTTTGTTTTTCTCCCA‑TCATCGTCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCaa                                                     <  1:2011119/147‑1 (MQ=255)
                                                                                                     c‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAat                                                    >  1:1217377/1‑151 (MQ=255)
                                                                                                       aaCTTCCTTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCAC‑GCCACGACCGTTTTCTTCCACAATGTTATCAGCACCGCTCTTATTGTCCTCCTTTCTCTGAACGCTTTCCATCATGTTTTTATTTTT‑ATCTTCAata                                                   >  1:1946632/1‑151 (MQ=255)
                                                                                                         cTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATAtt                                                 >  1:2338930/1‑151 (MQ=255)
                                                                                                          ttCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGGATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATAttt                                                >  1:527519/1‑151 (MQ=255)
                                                                                                            cATTCTCCCCCTCATTTTTTGTTTTCCCCTCA‑TCACCGCCAGACCCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTc                                              <  1:2453035/151‑1 (MQ=255)
                                                                                                            cATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTc                                              >  1:654368/1‑151 (MQ=255)
                                                                                                              ttCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCAt                                            >  1:1608876/1‑151 (MQ=255)
                                                                                                              ttCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCAt                                            >  1:1019514/1‑151 (MQ=255)
                                                                                                                ctcAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCAttt                                          >  1:1658353/1‑151 (MQ=255)
                                                                                                                ctcAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCAttt                                          >  1:2862869/1‑151 (MQ=255)
                                                                                                                  cAGCCTCAATTTTTTTTTTTCTCTCA‑TCATCGTCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTcc                                        <  1:410322/151‑1 (MQ=255)
                                                                                                                   cccctaatttttttttttTCTCTCA‑TCATC‑TCAAAACCCCCCGCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCa                                       <  1:2978136/143‑1 (MQ=255)
                                                                                                                   aGCCTCAATTTTTTTTTTTCTCTCA‑TCATCGTCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCa                                       <  1:2104750/151‑1 (MQ=255)
                                                                                                                   aGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCa                                       >  1:823294/1‑151 (MQ=255)
                                                                                                                    cccTCATTTTTTTTTTTTCTTTCA‑TCATCTTCAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCAc                                      <  1:2471264/150‑1 (MQ=255)
                                                                                                                     cccaatttttttttttTCCCCCA‑TCACCGCCAAAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACt                                     <  1:206746/145‑1 (MQ=255)
                                                                                                                      cTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAGTATTTTCATTTCCACtt                                    >  1:73863/1‑151 (MQ=255)
                                                                                                                       caaaTTTTTTTTTTTCTCCCA‑TCATCCACAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTg                                   <  1:3263122/149‑1 (MQ=255)
                                                                                                                         aaTTTTTTTTTTTCTCCCA‑TCACCG‑CAAAAACCCCCGCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCa                                 <  1:1423740/151‑1 (MQ=255)
                                                                                                                          aTTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCaa                                >  1:1723477/1‑151 (MQ=255)
                                                                                                                            ttttGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAata                              >  1:322986/1‑151 (MQ=255)
                                                                                                                               tttttttCCCTCA‑TCACCGCCAAAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCt                           <  1:383687/149‑1 (MQ=255)
                                                                                                                                ttttttCTCTCA‑TCTTCGTAAGAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCtt                          <  1:1735660/150‑1 (MQ=255)
                                                                                                                                gTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCtt                          >  1:453359/1‑151 (MQ=255)
                                                                                                                                  ttttCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCTTcc                        >  1:527010/1‑151 (MQ=255)
                                                                                                                                   tttCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCTTccc                       >  1:1817178/1‑151 (MQ=255)
                                                                                                                                    ttCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCTTcccc                      >  1:2276172/1‑151 (MQ=255)
                                                                                                                                      ctctcA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCTTCCCCTa                    >  1:2734614/1‑151 (MQ=255)
                                                                                                                                      ctctcA‑TCATCGTCAAACCCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCTTCCCCTa                    <  1:808145/151‑1 (MQ=255)
                                                                                                                                      ctctcA‑CCATCGTAAAAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCTTcccata                    <  1:3333991/151‑4 (MQ=255)
                                                                                                                                          ca‑tcatCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCTTCCCCTAtttt                >  1:484603/1‑151 (MQ=255)
                                                                                                                                          ca‑tcatCG‑CAAAAACCCCCGCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCTTCCCCTAtttt                <  1:2432991/151‑1 (MQ=255)
                                                                                                                                             tctccGTCAAAACCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCTTCCCCTATTTTgc              <  1:2241180/147‑1 (MQ=255)
                                                                                                                                             tcatcGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCTTCCCCTATTTTgc              >  1:1970610/1‑151 (MQ=255)
                                                                                                                                                  gTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCTTCCCCTATTTTGCCGCCa         >  1:3086477/1‑151 (MQ=255)
                                                                                                                                                   tCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTTTATCCTCAATATTTTCATTTCCACTTGCAATATCTTCCCCTTTTTTGCCGCCa         >  1:1227979/1‑151 (MQ=255)
                                                                                                                                                         aCCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCATCAATATTTTCATTTCCACTTGCAATATCTTCCCCTATTTTGCCGCCATCTTCAc  >  1:2823842/1‑151 (MQ=255)
                                                                                                                                                         |                                                                                                                                                        
ACCAATTCTTCAAAATTTATTTCACTGCCGGCTTTTCTTTTATTCCCAAACTCATCTTTACTTTCAGTTTCATTTTCATTTTCTTTTTC‑ATTCTTATCTTC‑AACTTCATTCTCAGCCTCAATTTTTGTTTTTCTCTCA‑TCATCGTCAGAAACCCC‑GCCACGACCGTTTTCTTCCACAATGGTATCAGCACCGCTCTTATTGTCCTCTTTTCTCTGAACGCTTTCAATCATGTTTTTATTTTT‑ATCCTCAATATTTTCATTTCCACTTGCAATATCTTCCCCTATTTTGCCGCCATCTTCAC  >  CP002416/3232324‑3232624

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑