Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0024163,157,5000AC32.3% 280.9 / 31.4 133V32G (GTT→GGT) Clo1313_2688hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (76/14);  new base C (0/43);  total (76/57)
Fisher's exact test for biased strand distribution p-value = 4.64e-23
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 141 total aligned reads displayed.

AAAAATAGATTAAAAATCCAACAAAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAACTGTTCCCGTATTTCATGTCTG  >  CP002416/3157351‑3157648
                                                                                                                                                        |                                                                                                                                                     
aaaaaTAGATTAAAAATCCAACAAAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAAc                                                                                                                                                      <  1:567592/151‑1 (MQ=255)
    aTAGATTAAAAATCCAACAAAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCt                                                                                                                                                 <  1:2279253/151‑1 (MQ=255)
    aTAGATTAAAAATCCAACAAAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCt                                                                                                                                                 <  1:609122/151‑1 (MQ=255)
    aTAGATTAAAAATCCAACAAAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCt                                                                                                                                                 >  1:2595833/1‑151 (MQ=255)
      aGATTAAAAATCCAACAAAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGc                                                                                                                                               <  1:3402707/151‑1 (MQ=255)
       gATTAAAAATCCAACAAAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCTGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCa                                                                                                                                              >  1:768454/1‑151 (MQ=255)
        aTTAAAAATCCAACAAAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCaa                                                                                                                                             >  1:1971812/1‑151 (MQ=255)
           aaaaaTCCAACAAAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGaa                                                                                                                                          >  1:87320/1‑151 (MQ=255)
                tCCAACAAAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTACCGCATACCAACCT‑GTAAACTTAAGAACTGCAAACACC‑GCTGCAAGAACCGcc                                                                                                                                     >  1:1211575/1‑151 (MQ=255)
                 ccAACAAAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCa                                                                                                                                    <  1:499041/151‑1 (MQ=255)
                  caacaaAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCaa                                                                                                                                   >  1:3339556/1‑151 (MQ=255)
                    acaaAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATg                                                                                                                                 >  1:3135408/1‑151 (MQ=255)
                     caaAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGa                                                                                                                                >  1:2183933/1‑151 (MQ=255)
                      aaaGAAACACAGTACAGCCAAAACTGCAAATCCATACCATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGACAATGat                                                                                                                               >  1:609782/1‑151 (MQ=255)
                       aaGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGata                                                                                                                              >  1:1233389/1‑151 (MQ=255)
                       aaGAAACACAGTACAGCCAAAACTGCAAATCCATACAATAGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGata                                                                                                                              >  1:2446249/1‑151 (MQ=255)
                        aGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGatat                                                                                                                             >  1:2138833/1‑151 (MQ=255)
                          aaaCACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTa                                                                                                                           >  1:912730/1‑151 (MQ=255)
                          aaaCACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTa                                                                                                                           >  1:3448340/1‑151 (MQ=255)
                           aaCACAGTACAGCCAAAACTGCAAACCCATACAATGGAA‑CAAAAACCAGAGGCAAATTATCCTGAAAGTCAAGGGC‑ACTTTCAATCCCCGCATCCCACCCT‑GTAAATTTAAAACCTGCAAAACCC‑GCTGAAAGAACCGCCAATGATATTaa                                                                                                                          <  1:2827534/151‑1 (MQ=255)
                           aaCACAGTACAGCCAAAACTGCAAACCCATACAAGGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATCCCCGCATCCCACCCT‑GTAAACTAAAGACCTGCAAAACCC‑GCTGCAAGAACCGCCAATGATATTaa                                                                                                                          <  1:2054590/151‑1 (MQ=255)
                            acacAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAAc                                                                                                                         >  1:389044/1‑151 (MQ=255)
                            acacAGTACAGCAAAACCTGCAAATCAATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTAAAGGGC‑ACTTTCAATTCCCGAAAACCAACCT‑GTAAACTTAAAAACTGCAAAACCC‑GCTGCAAGAACCGCCAATGATATTAAc                                                                                                                         <  1:2107824/151‑1 (MQ=255)
                               aaGTACAGCAAAAGCTACAAATCAAAACA‑TGGGAACTAAATTCAGAGGAGATTTATACTGAAAGTAAAGGGC‑ACTTTCAATCCCCGAATCCAAACGT‑GAAAACTTAAGAACTACAAAACCC‑GCGGAAAAAACCGCCAATGATATTAACAAg                                                                                                                      <  1:2369596/150‑1 (MQ=255)
                                   aCAGCTAAACCTGCAAATCCAAACAATGGGA‑CTAAAATCAGGGGCAAATTATACTGCAAGTCAAGGGC‑ACTTTCACTCCCCACATACCAACCT‑ATAATCTTAAGAACTGCAAAACCC‑GCTGCAAAAACCGCCAATGATATTAACAAGGTCt                                                                                                                  <  1:639640/151‑1 (MQ=255)
                                     aGCCAAACCTGAAAACCCATACAATGGGA‑CAAAAACCAGAGGCAAATTATACGGCAAGTCAAGGGC‑CTTTTCAATTCCCGCATCCCACCCT‑GTAAACTAAAGAACTGCAAAACCC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCttt                                                                                                                <  1:433620/151‑1 (MQ=255)
                                     aGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCttt                                                                                                                >  1:151714/1‑151 (MQ=255)
                                       ccAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGc                                                                                                              >  1:493625/1‑151 (MQ=255)
                                         aaaaCTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCAt                                                                                                            >  1:2411133/1‑151 (MQ=255)
                                          aaaCTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATa                                                                                                           >  1:1952177/1‑151 (MQ=255)
                                          aaaCTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATa                                                                                                           >  1:1644458/1‑151 (MQ=255)
                                          aaaCTGAAAACCCATAAAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTAAAGGAC‑ATTTTCAATCCCCGAATCCCACCCT‑GAAAACTAAAGAACTGAAAAACCC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATa                                                                                                           <  1:2263149/151‑1 (MQ=255)
                                           aaCTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATaa                                                                                                          >  1:2732210/1‑151 (MQ=255)
                                           aaCTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATaa                                                                                                          >  1:2344280/1‑151 (MQ=255)
                                              tGCAAATCCATACAAGGGGA‑CAAAAATAAGGGGCGAATTATCCTGCAAGTAAAGGGC‑CTTTTAAATCCCCGCATCCCACCCT‑GTAAACTTAAGAACTGCAAAACCC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATaagaa                                                                                                       <  1:1861771/151‑1 (MQ=255)
                                                cAAATCCATACAATGGGA‑CTAAAATCAGAGGGGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATaagaagg                                                                                                     >  1:2894010/1‑150 (MQ=255)
                                                 aaaTCCATACAATGGGA‑CTAAAACCAGAGGCAAATTATACGGAAAGTAAAGGGC‑GCTTTCAATCCCCGCATACCACCCT‑GTAAACTAAAGAACGGCAAAACCC‑GCGGAAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTc                                                                                                    <  1:333133/151‑1 (MQ=255)
                                                  aaTCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCa                                                                                                   >  1:2455200/1‑151 (MQ=255)
                                                        aaCAAGGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑CTTTTAAATCCCCGCATCCCACCCT‑GTAAACTAAAGACCTGCAAAACCC‑GCTGCAAAAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGt                                                                                             <  1:1351355/150‑1 (MQ=255)
                                                         ataaTGGAA‑CAAAAATCAGAGACAAATTATTCTGCAAG‑CAAGGGCCTCTTTCAATCCCCGAATACCAACTT‑AAAAACTTAAGATCTGCAAAACCA‑GCTAAAAAAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTa                                                                                            <  1:2458229/149‑1 (MQ=255)
                                                         aCAATGGGA‑CTAAAATCAGAGCCGAATAATACTGCAAGTAAAGGCC‑ACTTCCAATTCCCGCATCCCACCCT‑TAAAACTTAAGAACGGAAAAACCC‑GCGCCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTa                                                                                            <  1:71142/151‑1 (MQ=255)
                                                          cAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTAc                                                                                           >  1:2448393/1‑151 (MQ=255)
                                                          acaagggcacaaaaaTCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATCCCCGCATACCACCCT‑GTAAACTAAAAAACTGAAAAACCC‑GTTAAAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTa                                                                                            <  1:336747/140‑1 (MQ=255)
                                                          aaaggggA‑CTAAAATCAGAGGCAAATTATACTGAAAGTCAAGGGC‑ACTTTCAATCCCCGCATACCAACCT‑GAAAATTAAAGAACTGAAAAAACC‑GCGGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTAc                                                                                           <  1:3013999/147‑1 (MQ=255)
                                                            aTGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACtt                                                                                         >  1:693943/1‑151 (MQ=255)
                                                             ggggA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTCCAATCCCCGCATCCCACCCT‑TTAAACTTAAGAACGGAAAAACCC‑GCGAAAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACttt                                                                                        <  1:77534/150‑1 (MQ=255)
                                                             ggggA‑CAAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ATTTACAATCCCCGCATACCACCCT‑ATAAATTAAAAAACTGAAAAAACC‑GCTGAAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACttt                                                                                        <  1:1586599/150‑1 (MQ=255)
                                                                    tAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATc                                                                                  >  1:2021003/1‑151 (MQ=255)
                                                                    tAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATc                                                                                  >  1:799972/1‑151 (MQ=255)
                                                                     aaaaTCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCa                                                                                 >  1:2954152/1‑151 (MQ=255)
                                                                      aaaTCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAGGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCaa                                                                                >  1:3165426/1‑151 (MQ=255)
                                                                      aaaTCAGAGGCAAATTATACTGAAAGTCAAGGGC‑ATTTTCAATTCCCGAATACCAACCT‑GTAAATTAAACAACTAAAAAACCC‑GCGGAAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCaa                                                                                <  1:2137041/151‑1 (MQ=255)
                                                                        acaagaggaaaaTTATACTGAAAGTCAAGGCC‑CTTTTAAATCCCCGCAT‑CCAAACTAGTAAACTAAAGAACTGAAAAACCC‑GCGGAAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAAt                                                                              <  1:331015/141‑1 (MQ=255)
                                                                         ccagaggaaaaTTATACTGCAAGCAAAGGGC‑CCTTTCAATCCCCGCAAACCACCCT‑TAAAACTAAAGAACTGCAAAACCC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATa                                                                             <  1:119151/142‑1 (MQ=255)
                                                                          cAGAGGCGAATTATACTGCAAGCCAAGGGC‑CCTTTCAATCCCCCCAAACCACCCT‑TTAAACTAAAGACCTAAAAAACCC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATAc                                                                            <  1:2793596/151‑1 (MQ=255)
                                                                          cAGAGGCAAATTATACTGCAAGTCAAGGGC‑ACTTTAAATCCCCGCATACCACCCT‑GTAAACTAAAGAACTGCAAAACCC‑GCTGCAAAAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATAc                                                                            <  1:454877/151‑1 (MQ=255)
                                                                               gCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTtctc                                                                       >  1:2599781/1‑151 (MQ=255)
                                                                                cGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTCTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCa                                                                      >  1:2325717/1‑151 (MQ=255)
                                                                                    ttATACTGCAAGTCAAGGCC‑ACTTCCAATCCCCCCATACCACCCT‑GTAAACTTAAGAACTGCAAAACCC‑GCTGAAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTa                                                                  <  1:2211327/151‑1 (MQ=255)
                                                                                     tataCTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTaa                                                                 >  1:1929410/1‑151 (MQ=255)
                                                                                      ataCTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAAc                                                                >  1:414486/1‑151 (MQ=255)
                                                                                       taCTGCAAGTCAGGGGC‑ACTTTAAATCCCCGCATCCCAACCT‑GAAAACTTAAGAACTGAAAAACCC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACt                                                               <  1:1448629/151‑1 (MQ=255)
                                                                                       taCTGCAAGTCAAGGGC‑ATTTTCAATCCCCGCATACCACCCT‑GAAAACTAAAGAACTGAAAAACCC‑GCTGAAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACt                                                               <  1:356340/151‑1 (MQ=255)
                                                                                        aCTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACtt                                                              >  1:1274817/1‑151 (MQ=255)
                                                                                         cTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACttt                                                             >  1:280902/1‑151 (MQ=255)
                                                                                         cTGCAAGTCAAGGGC‑ACTTTCAATCCCCGCATACCACCCT‑GAAAACTAAAGAACTGAAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACttt                                                             <  1:144421/151‑1 (MQ=255)
                                                                                             aaGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCa                                                         >  1:741872/1‑151 (MQ=255)
                                                                                             aaGTCAAGGGC‑ACTTTCAATCCCCGCATCCCACCCT‑GTAAACTAAAGAACTGCAAAACCC‑GCTGAAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCa                                                         <  1:2942746/151‑1 (MQ=255)
                                                                                             aaGTCAAGGGC‑ACTTTCAATCCCCGCATACCACCCT‑GTAAACTTAAGAACTGCAAAACCC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCa                                                         <  1:2512753/151‑1 (MQ=255)
                                                                                              aagtaaGGGCCACTTTAAATCCCCGCATCCCACCCT‑ATAAACTAAAGAACGGAAAAACCC‑GCGGAAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCa                                                         <  1:2077633/147‑1 (MQ=255)
                                                                                                 cAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCActcc                                                     >  1:3281694/1‑151 (MQ=255)
                                                                                                   aGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCActcctc                                                   >  1:53018/1‑151 (MQ=255)
                                                                                                           tttaaatccccGCATACCAACCT‑GAAAACTTAA‑AACCGGAAAAACCCGCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGccccc                                            <  1:1540044/143‑1 (MQ=255)
                                                                                                             taaaTTCCCGCAAACCACCCT‑AAAAACTAAAGACCTGAAAAACCC‑GCTGCAAAAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCtt                                          <  1:2615223/149‑1 (MQ=255)
                                                                                                               aatccccGCATACCACCTT‑TTAACCTAAAGAACGGCAAAACCC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCtttt                                        <  1:430385/147‑1 (MQ=255)
                                                                                                               aaTTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGACATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCtttt                                        >  1:1075791/1‑151 (MQ=255)
                                                                                                                 tccccGCATCCCACCCT‑TAAAACTAAAGACCTGCAAAACCC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCg                                      <  1:561342/149‑1 (MQ=255)
                                                                                                                 tccccGCATCCCACCCT‑GTAACCTAAAAAACTGCAAAACCC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCg                                      <  1:1021/149‑1 (MQ=255)
                                                                                                                       ccatcccacccaaaaaaCTTAAGACCTGAAAAACCC‑GCTGAAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTAt                                 <  1:951618/137‑1 (MQ=255)
                                                                                                                       cATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTAtc                                >  1:3058249/1‑151 (MQ=255)
                                                                                                                       cATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTAtc                                >  1:2951391/1‑151 (MQ=255)
                                                                                                                       cATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTAtc                                >  1:356319/1‑151 (MQ=255)
                                                                                                                       cATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTAtc                                >  1:2010622/1‑151 (MQ=255)
                                                                                                                        aTACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTAtct                               >  1:1465007/1‑151 (MQ=255)
                                                                                                                            cAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTc                           >  1:223764/1‑151 (MQ=255)
                                                                                                                            cAACCT‑GTAAACTAAAGAACTGAAAAACCC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTc                           <  1:318207/151‑1 (MQ=255)
                                                                                                                               ccT‑GTAAACTTAAGAACTGCAAAACCC‑GCGGCAAGAGCCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGaa                        <  1:2686686/151‑1 (MQ=255)
                                                                                                                                cT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAAc                       >  1:3342134/1‑151 (MQ=255)
                                                                                                                                    tAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAACTGt                    >  1:2379579/1‑151 (MQ=255)
                                                                                                                                       aCTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAACTGTTcc                 >  1:3138496/1‑151 (MQ=255)
                                                                                                                                       aCTTAAGAACGGAAAAACCC‑GCTGAAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAACTGTTca                 <  1:430623/151‑2 (MQ=255)
                                                                                                                                        cTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAACTGTTccc                >  1:3236806/1‑151 (MQ=255)
                                                                                                                                         ttAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTAAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAACTGTTCCCg               >  1:2795403/1‑151 (MQ=255)
                                                                                                                                          tAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAACTGTTCCCGt              >  1:972727/1‑151 (MQ=255)
                                                                                                                                                cTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAACTGTTCCCGTATTTCa        >  1:1271563/1‑151 (MQ=255)
                                                                                                                                                  gaaaaacCC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAACTGTTCCCGTATTTCATg      <  1:2517237/149‑1 (MQ=255)
                                                                                                                                                   cAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAACTGTTCCCGTATTTCATGt     >  1:65820/1‑151 (MQ=255)
                                                                                                                                                    aaaacCC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAACTGTTCCCGTATTTCATGTc    <  1:2300503/151‑1 (MQ=255)
                                                                                                                                                      aaaCC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAACTGTTCCCGTATTTCATGTCTg  <  1:472120/151‑1 (MQ=255)
                                                                                                                                                      aaaCC‑GCGGAAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAACTGTTCCCGTATTTCATGTCTg  <  1:1500880/151‑1 (MQ=255)
                                                                                                                                                        |                                                                                                                                                     
AAAAATAGATTAAAAATCCAACAAAGAAACACAGTACAGCCAAAACTGCAAATCCATACAATGGGA‑CTAAAATCAGAGGCGAATTATACTGCAAGTCAAGGGC‑ACTTTCAATTCCCGCATACCAACCT‑GTAAACTTAAGAACTGCAAAAACC‑GCTGCAAGAACCGCCAATGATATTAACAAGGTCTTTGCATAAGAAGTCAATATGTACTTTACTATCAAATACTTCTCAAGTAACTTTTTCACTCCTCCGCCCCCTTTTCGGCTATCTCTTCGAACTGTTCCCGTATTTCATGTCTG  >  CP002416/3157351‑3157648

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑