Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0024162,843,7170TG35.9% 287.7 / 24.6 148V154G (GTA→GGA) Clo1313_2433penicillin‑binding protein, 1A family
Reads supporting (aligned to +/- strand):  ref base T (23/70);  new base G (52/0);  total (77/71)
Fisher's exact test for biased strand distribution p-value = 1.93e-21
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 159 total aligned reads displayed.

CACAGGACTTAAAAGACGCTTTCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCATATATATGGGACAGAACTGCTATGG  >  CP002416/2843567‑2843867
                                                                                                                                                        |                                                                                                                                                      
cacaGGACTTAAAAGACGCTTTCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGt                                                                                                                                                        <  1:2770273/151‑1 (MQ=255)
 acaGGACTTAAAAGACGCTTTCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGta                                                                                                                                                       <  1:296919/151‑1 (MQ=255)
  caGGACTTAAAAGACGCTTTCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGtaa                                                                                                                                                      <  1:1170540/151‑1 (MQ=255)
    ggACTTAAAAGACGCTTTCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGtaata                                                                                                                                                    <  1:2462226/151‑1 (MQ=255)
        ttAAAAGACGCTTTCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATaaaaa                                                                                                                                                <  1:2728412/151‑1 (MQ=255)
          aaaaGACGCTTTCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAAc                                                                                                                                              <  1:704003/151‑1 (MQ=255)
           aaaGACGCTTTCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAAcc                                                                                                                                             <  1:1608237/151‑1 (MQ=255)
              gACGCTTTCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGGAGTA‑ACAATA‑ACCAGCAGGGAAAAAAAAACCTTa                                                                                                                                          >  1:318837/1‑151 (MQ=255)
                cGCTTTCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATaaaaaaacctacc                                                                                                                                        >  1:512329/1‑144 (MQ=255)
                 gCTTTCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCCGCAGGGAATAAAAAAACTTaacc                                                                                                                                       >  1:897527/1‑148 (MQ=255)
                 gCTTTCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAAACTTACCg                                                                                                                                       >  1:2453560/1‑151 (MQ=255)
                 gCTTTCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAACAGGGAATAAAAAACATTAccc                                                                                                                                       >  1:3075046/1‑150 (MQ=255)
                    ttCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTC‑CCCAGCAGGTAATAAAAAACCTTACCGGCa                                                                                                                                    <  1:791388/151‑1 (MQ=255)
                      cGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAAt                                                                                                                                  <  1:1530525/151‑1 (MQ=255)
                      cGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAACCTTACCGGCaaa                                                                                                                                  >  1:1602610/1‑150 (MQ=255)
                       gTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAAACTTACCGGCCATg                                                                                                                                 >  1:1872102/1‑151 (MQ=255)
                         tGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTAACCCA‑CAGGGAATAAAAAACCTTCACGGCAATGAc                                                                                                                               >  1:2915973/1‑151 (MQ=255)
                         tGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGAc                                                                                                                               <  1:2369672/151‑1 (MQ=255)
                         tGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCAACTTACGGCGGTCGTA‑CCATTA‑ACCACCAGGTAATAAAAAACCCTACCgggaaagac                                                                                                                               >  1:2737043/1‑144 (MQ=255)
                           cAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGa                                                                                                                             <  1:1917201/151‑1 (MQ=255)
                             aTTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGaaa                                                                                                                           <  1:1790172/151‑1 (MQ=255)
                              ttGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAg                                                                                                                          <  1:1441192/151‑1 (MQ=255)
                              ttGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGCATTA‑GCATTA‑CCCAGCAGGTAATAAAAAAACCTACCAGCAAttgccgaag                                                                                                                          >  1:214384/1‑143 (MQ=255)
                               tGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAAGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGCA‑CCATTA‑CCCAGCAGGGAATAAAAAACCTTACCGGCAATGACGAAAgg                                                                                                                         >  1:549915/1‑151 (MQ=255)
                                gAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAggt                                                                                                                        <  1:1531307/151‑1 (MQ=255)
                                  aGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAggtcg                                                                                                                      <  1:337704/151‑1 (MQ=255)
                                  aGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAACCCTACCGGCAATGACGAAAgggcg                                                                                                                      >  1:372474/1‑148 (MQ=255)
                                   gATAAACGTTTTTACAAGCATCCCGGCCTAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAggtcgg                                                                                                                     <  1:2355872/151‑1 (MQ=255)
                                     tAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGGAGTA‑CCATTA‑TCCAACAGGTAAGAAAAAACCATTCCGGGAATGGTGAAAgggcgggg                                                                                                                   >  1:1574879/1‑149 (MQ=255)
                                         cGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCaaaa                                                                                                               >  1:301805/1‑151 (MQ=255)
                                            ttttACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAACCTTACCGGCAATGACGAAAGGGCGGTCCaaagaa                                                                                                            >  1:615474/1‑151 (MQ=255)
                                             tttACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAaaagaaa                                                                                                           <  1:257110/151‑1 (MQ=255)
                                              ttACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGGA‑CCATTA‑ACCAGCAGGGAATAAAAAACCCTACCGGCAATGACGAAAGGGCGGGCAaaagaaaa                                                                                                          >  1:279508/1‑150 (MQ=255)
                                                aCAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCCGAGCATCATCTTACGGCGGTAGTA‑CCATTC‑ATCAGCAGGTAATAAAAAAACTTTCCGGCCATGTCGAAAGGTCGGTCaaacggcagat                                                                                                        <  1:2606974/151‑9 (MQ=255)
                                                  aaGCATCCCGGCATAGATGTGAAAAGAATAGCAGGATCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTc                                                                                                      <  1:429856/151‑1 (MQ=255)
                                                   aGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCa                                                                                                     <  1:3140712/151‑1 (MQ=255)
                                                    gCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAg                                                                                                    <  1:1116184/151‑1 (MQ=255)
                                                    gCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAg                                                                                                    <  1:2904120/151‑1 (MQ=255)
                                                      aTCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAACCCTACCGGCCATGACGAAAGGGCGGGCAAAAGAAAGAATCAGGa                                                                                                  >  1:2436313/1‑151 (MQ=255)
                                                       tCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGaa                                                                                                 <  1:2416190/151‑1 (MQ=255)
                                                       tCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGAAGTA‑CCCTTT‑CCCAACAGGGAATAAAAAACCTTAACGGCACAAACGAAAGGGCGGTCAAAAAAAAAAATCAGGaa                                                                                                 >  1:1997878/1‑151 (MQ=255)
                                                        cccGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAAt                                                                                                >  1:541045/1‑151 (MQ=255)
                                                         ccGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGGA‑CCATTA‑CCCAGCCGGGAATAAAAAACCCTACCGGCAATGACGAAAGGGCGGTCAAAAGAAAAAATCAGGAATg                                                                                               >  1:1644460/1‑151 (MQ=255)
                                                          cGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATgg                                                                                              <  1:2521425/151‑1 (MQ=255)
                                                          cGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATgg                                                                                              <  1:2121290/151‑1 (MQ=255)
                                                            gCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGGA‑ACATTA‑CCCCGCAGGGAATAAAAAACCTTAACGGGAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGaa                                                                                            >  1:1196944/1‑151 (MQ=255)
                                                             cATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGaaa                                                                                           <  1:1133034/151‑1 (MQ=255)
                                                             cATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAACCTTACCGGCAATGACGAAAGGGCGGGCAAAAGAAAGATTCAGGAATGGaaa                                                                                           >  1:2719741/1‑151 (MQ=255)
                                                               tAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGAATCAGGAATGGAAACt                                                                                         >  1:2064134/1‑151 (MQ=255)
                                                                aGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑ACATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGGCGGTCAAAAGAAAGATTCAGGAATGGGAACTc                                                                                        >  1:2341111/1‑151 (MQ=255)
                                                                 gATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCg                                                                                       <  1:3178805/151‑1 (MQ=255)
                                                                 gATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCg                                                                                       <  1:113747/151‑1 (MQ=255)
                                                                   tgtgAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGcc                                                                                     <  1:1793130/151‑1 (MQ=255)
                                                                     tgAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑ACATTA‑CCCAGCAGGGAATAAAAAACCTTACCGGCAATGACGAAAGGGCGGGCAAAAGAAAGATTCAGGAATGGAAACTCGCCtt                                                                                   >  1:1226827/1‑151 (MQ=255)
                                                                         aaGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGt                                                                               <  1:1895891/151‑1 (MQ=255)
                                                                            aaTAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCCGCAGGTAATAAAAAACCTTACCGGCAATGACCAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCtt                                                                            <  1:3285252/151‑1 (MQ=255)
                                                                            aaTAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCtt                                                                            <  1:1898373/151‑1 (MQ=255)
                                                                             aTAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTATGA‑CCATTA‑CCCCCCAGGTAATAAAAAACCTTAACGGCAATTACGAAAGGTCGGTCAAAAGAAAAAATCAGGAATGGAAACTccccctaaaacttg                                                                           >  1:1365359/1‑138 (MQ=255)
                                                                             aTAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAAACCTACCGGCAATGACGAAAAGTCGGGCAAAAGAAAGAATCAGGAATGGAAAATCGCCTTAAGTCTTg                                                                           >  1:1268765/1‑151 (MQ=255)
                                                                              tAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGa                                                                          <  1:2448134/151‑1 (MQ=255)
                                                                              tAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGGA‑CCATTA‑CCCAGCAGGGAATAAAAAACCTTAACGGCAATGAAGAAAGGTCGGTCAAAAGAAAGATTCAGGAAAGGAAACTCGCCTTAAGTCTTGa                                                                          >  1:1821804/1‑151 (MQ=255)
                                                                                gCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAAATTCAGGAATGGAAACCCGCCTTAAGTCTTGAgc                                                                        >  1:642032/1‑151 (MQ=255)
                                                                                 cAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAgcg                                                                       >  1:2239432/1‑151 (MQ=255)
                                                                                      gCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAAtc                                                                  <  1:797127/151‑1 (MQ=255)
                                                                                      gCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAAtc                                                                  <  1:2742702/151‑1 (MQ=255)
                                                                                          taataaATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTAACCAT‑A‑CCCAGCAGGGAAAAAAAAACCTTACCGGCAATGACGAAAGGGCCGGCAAAAGAAAGAATCAGGAAAGGAAACCCGCCTTTAGTCtttgtcgcaaactcag                                                              >  1:2670994/1‑137 (MQ=255)
                                                                                           aataaATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑ACATTA‑CCCAGCCGGGAATAAAAAACCTTACCCGCCATGACGAAAGGTCGGGCAAAAGAAAAATTCAGGAAAGGAAAATCGCCTTAAGGCTTGAGCGCAAACTCAGc                                                             >  1:712716/1‑151 (MQ=255)
                                                                                            ataaATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCCGGGAATAAAAAAACTTACAGGCAATGACGAAAGGTCGGTCAAAAGAAAAAATCAGGAATGGAAACTCGCCTTAAGTCTTTAGCGCAAACTCAGCa                                                            >  1:2726670/1‑151 (MQ=255)
                                                                                            ataaATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCa                                                            <  1:1651997/151‑1 (MQ=255)
                                                                                                aTTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTCATAAAAAACCTTACCGGCAATTACGCACGGTCGGTCACAAGAAAGATTTAAGACTGGAAACTCGCCTTAAGCCTTTAGCGCAATCTCAGCCAAGa                                                        >  1:2249185/1‑151 (MQ=255)
                                                                                                aTTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGa                                                        <  1:2886211/151‑1 (MQ=255)
                                                                                                aTTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGa                                                        <  1:341759/151‑1 (MQ=255)
                                                                                                 tttCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGCAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGAc                                                       <  1:2231707/151‑1 (MQ=255)
                                                                                                  ttcttcAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGAcc                                                      <  1:3355017/151‑1 (MQ=255)
                                                                                                     ttcAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGa                                                   <  1:1458352/151‑1 (MQ=255)
                                                                                                      tcAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGGCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGAt                                                  >  1:678561/1‑151 (MQ=255)
                                                                                                      tcAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAACCTTACCGGCAATGACGAAAGGGCGGGCCAAAGAAAGAATCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAAACCAGAt                                                  >  1:1996500/1‑151 (MQ=255)
                                                                                                        aaGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATAc                                                <  1:878057/151‑1 (MQ=255)
                                                                                                        aaGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATAc                                                <  1:992758/151‑1 (MQ=255)
                                                                                                        aaGCCCGGAGCATCATCTTACGGCGGTAGTA‑ACATTA‑CCCAGCAGGGAATAAAAAACCTTACCGGCAATGACGAAAGGGCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATAc                                                >  1:2418562/1‑151 (MQ=255)
                                                                                                         aGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAACCTTACCGGCAATGACGAAAGGGCGGGCAAAAGAAAGATTCAGGAATGGGAACTCGCCTTAAGTCTTTAGCGCAAACTCAGCAAAGACCAGAAACt                                               >  1:2035511/1‑151 (MQ=255)
                                                                                                         aGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGGAATAAAAAACCTTACCGGCAATGACGAAAGGGCGGGCAAAAGAAAGATTCAGGAATGGAAACTCGCCCTAAGTCTTGAGCGCAATCTCAGCAAAAACCAGAAACt                                               >  1:85291/1‑151 (MQ=255)
                                                                                                            ccGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGa                                            <  1:2915972/151‑1 (MQ=255)
                                                                                                              ggAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAAc                                          <  1:2025786/151‑1 (MQ=255)
                                                                                                                  catcatCTTACGGCGATAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAATGTCGATCAAAAGAAAGATTCAGGAATGGAAACTCGCGTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACttta                                      <  1:1351625/151‑1 (MQ=255)
                                                                                                                   atcatcTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACtttat                                     <  1:2405932/151‑1 (MQ=255)
                                                                                                                         ttACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAAt                               <  1:1130768/151‑1 (MQ=255)
                                                                                                                                  tagta‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCatatat                      <  1:2958372/151‑1 (MQ=255)
                                                                                                                                         cATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCATATATATGGGa                <  1:1090348/151‑1 (MQ=255)
                                                                                                                                          aTTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCATATATATGGGAc               <  1:788014/151‑1 (MQ=255)
                                                                                                                                          aTTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCATATATATGGGAc               >  1:3171047/1‑151 (MQ=255)
                                                                                                                                           ttA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCATATATATGGGACa              <  1:3087513/151‑1 (MQ=255)
                                                                                                                                             a‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCATATATATGGGACAGa            <  1:1872101/151‑1 (MQ=255)
                                                                                                                                             a‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCATATATATGGGACAGa            <  1:3359892/151‑1 (MQ=255)
                                                                                                                                               cccAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCATATATATGGGACAGaa           <  1:1382584/151‑1 (MQ=255)
                                                                                                                                                ccAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCATATATATGGGACAGAAc          >  1:2322304/1‑151 (MQ=255)
                                                                                                                                                 cagcagGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCATATATATGGGACAGAACt         <  1:2827828/151‑1 (MQ=255)
                                                                                                                                                    cagGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCATATATATGGGACAGAACTGCt      <  1:947308/151‑1 (MQ=255)
                                                                                                                                                     agGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCATATATATGGGACAGAACTGCTa     <  1:2571269/151‑1 (MQ=255)
                                                                                                                                                        taataaAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCATATATATGGGACAGAACTGCTATgg  >  1:2967202/1‑151 (MQ=255)
                                                                                                                                                        |                                                                                                                                                      
CACAGGACTTAAAAGACGCTTTCGTTGCAATTGAAGATAAACGTTTTTACAAGCATCCCGGCATAGATGTGAAAAGAATAGCAGGAGCGGTAATAAATTTCTTCAAGCCCGGAGCATCATCTTACGGCGGTAGTA‑CCATTA‑CCCAGCAGGTAATAAAAAACCTTACCGGCAATGACGAAAGGTCGGTCAAAAGAAAGATTCAGGAATGGAAACTCGCCTTAAGTCTTGAGCGCAATCTCAGCAAAGACCAGATACTGGAACTTTATTTAAATCTCATATATATGGGACAGAACTGCTATGG  >  CP002416/2843567‑2843867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑