| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP002416 | 2,464,029 | 0 | T | C | 43.5% | 116.2 / inf | 248 | D142G (GAC→GGC) | Clo1313_2096 | 4'‑phosphopantetheinyl transferase |
| Reads supporting (aligned to +/- strand): ref base T (79/61); new base C (46/62); total (125/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.02e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 249 total aligned reads displayed.
AGTTTTGACAAAGCCTCTTTTCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCAACGAGGGTCAATTATGCTCCG > CP002416/2463879‑2464177 | aGTTTTGACAAAGCCTCTTTTCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGt > 1:3411067/1‑151 (MQ=255) gTTTTGACAAAGCCTCTTTTCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTc < 1:1791310/151‑1 (MQ=255) ttttGACAAAGCCTCTTTTCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCt < 1:2104544/151‑1 (MQ=255) cAAAGCCTCTTTTCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTccc < 1:3206695/151‑1 (MQ=255) cAAAGCCTCTTTTCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTccc < 1:1221737/151‑1 (MQ=255) aaaGCCTCTTTTCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCa < 1:3152771/151‑1 (MQ=255) ccTCTTTTCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGc < 1:3157765/151‑1 (MQ=255) ctctTTTCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGcc > 1:3253551/1‑151 (MQ=255) tctTTTCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGccc < 1:2762313/151‑1 (MQ=255) tctTTTCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTAACAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGccc > 1:2815509/1‑151 (MQ=255) ctTTTCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatcca < 1:2211236‑M2/151‑7 (MQ=255) tCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTcc < 1:1755962/151‑1 (MQ=255) tCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTcc < 1:1730704/151‑1 (MQ=255) cTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAACATCTTTTCCATGCCTATTCCCACgatccatgcct < 1:2311914‑M2/151‑12 (MQ=255) cTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcct < 1:953560‑M2/151‑12 (MQ=255) cTTGTCCACAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCg > 1:849607/1‑151 (MQ=255) ttGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGa > 1:3062273/1‑151 (MQ=255) ccATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAAcc < 1:533898/151‑1 (MQ=255) aTAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggc < 1:1243651‑M2/151‑19 (MQ=255) tAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggca < 1:2851341‑M2/151‑20 (MQ=255) tGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATa < 1:3323382/151‑1 (MQ=255) ctctGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAAt > 1:518879/1‑151 (MQ=255) tGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACg > 1:1460977/1‑151 (MQ=255) cacaATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGaaa < 1:2971564/151‑1 (MQ=255) acaATATCCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAAc < 1:557319/151‑1 (MQ=255) caATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACg > 1:2171231/1‑151 (MQ=255) caATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaac > 1:2464793‑M2/1‑113 (MQ=255) aaTATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGc > 1:2144580/1‑151 (MQ=255) atatTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCa > 1:3009120/1‑151 (MQ=255) tatTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATGCTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctc > 1:3354687‑M2/1‑110 (MQ=255) tcatcaGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttg > 1:651501‑M2/1‑107 (MQ=255) catcaGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGt > 1:619844/1‑151 (MQ=255) atcaGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttgga > 1:937769‑M2/1‑105 (MQ=255) gTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttg > 1:1475080‑M2/1‑101 (MQ=255) aTTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGAt < 1:2904461/151‑1 (MQ=255) aTTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaa < 1:1874115‑M2/151‑53 (MQ=255) ttCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacc > 1:2479843‑M2/1‑97 (MQ=255) ccAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATacac > 1:1429223/1‑151 (MQ=255) ccAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaaccca < 1:2370127‑M2/151‑57 (MQ=255) aaaaCTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACAccc > 1:1202475/1‑151 (MQ=255) tttAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAg < 1:2019832/151‑1 (MQ=255) tAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttcc > 1:2801582‑M2/1‑84 (MQ=255) aGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAAt < 1:2236686/151‑1 (MQ=255) aGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccg > 1:1540407‑M2/1‑83 (MQ=255) aGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccg > 1:1816546‑M2/1‑83 (MQ=255) aTCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACt < 1:1083199/151‑1 (MQ=255) aTCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaat < 1:369334‑M2/151‑72 (MQ=255) ttttCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGga > 1:3020915/1‑151 (MQ=255) ttttCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatgga > 1:225813‑M2/1‑77 (MQ=255) tttCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGgag < 1:644942/151‑1 (MQ=255) ttCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaat < 1:2249340‑M2/151‑77 (MQ=255) tCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatc < 1:1283697‑M2/151‑78 (MQ=255) ccTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAAt > 1:2457852/1‑151 (MQ=255) ccTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAAt < 1:1963320/151‑1 (MQ=255) tctctTTCGGAAAAGCAATACTTTATCAATGCATCCTCGGGCCAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGCAACCATTCCGCTACAATACGGCAACGCATGGGTTATTGATACACCCATGGCAGAAGATCGGAGAATGa > 1:2120567/1‑151 (MQ=255) tctctTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGa > 1:1577546/1‑151 (MQ=255) ctctTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGaa < 1:1123606/151‑1 (MQ=255) ctTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAg > 1:86487/1‑151 (MQ=255) cGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGc > 1:2346904/1‑151 (MQ=255) cGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggct < 1:2291404‑M2/151‑88 (MQ=255) gAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCg > 1:2749873/1‑151 (MQ=255) gAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCg < 1:3459948/151‑1 (MQ=255) gAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggctta < 1:807408‑M2/151‑90 (MQ=255) aaaaGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGa > 1:1589435/1‑151 (MQ=255) gAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggcttactata > 1:2637128‑M2/1‑57 (MQ=255) aaaTACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggcttactatat < 1:3435447‑M2/151‑96 (MQ=255) aaaTACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggcttactatat < 1:41680‑M2/151‑96 (MQ=255) aaTACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGc > 1:1556521/1‑151 (MQ=255) tACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGccc > 1:24230/1‑151 (MQ=255) tACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGccc < 1:260630/151‑1 (MQ=255) aCTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggcttactatatccac < 1:3050384‑M2/151‑100 (MQ=255) ttATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCttt > 1:297756/1‑151 (MQ=255) tATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTg > 1:895753/1‑151 (MQ=255) cAATGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggcttactatatccactatgtag < 1:580645‑M2/151‑107 (MQ=255) tGCATCCTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggcttactatatccactatgtagttg > 1:253937‑M2/1‑42 (MQ=255) cATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATc < 1:1932735/151‑1 (MQ=255) aTCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATcc > 1:117033/1‑151 (MQ=255) tCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCa < 1:72854/151‑1 (MQ=255) ccTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAg > 1:470317/1‑151 (MQ=255) ccTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggcttactatatccactatgtagttgttgat < 1:1055856‑M2/151‑115 (MQ=255) cTCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggcttactatatccactatgtagttgttgatg < 1:1371833‑M2/151‑116 (MQ=255) tCGGGCAAAAAAATCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggcttactatatccactatgtagttgttgatgg < 1:1616612‑M2/151‑117 (MQ=255) cGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCa > 1:292623/1‑151 (MQ=255) gCAAAAAAATCTTTTCCATGTCTATTCCCGCCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCAACg < 1:1419463/151‑1 (MQ=255) aaaaaaaTCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggcttactatatccactatgtagttgttgatggacctgt > 1:714500‑M2/1‑29 (MQ=255) aaaaaaTCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggcttactatatccactatgtagttgttgatggacctgtc < 1:1976487‑M2/151‑124 (MQ=255) aaaaaTCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCAACGAggg > 1:2199402/1‑151 (MQ=255) aaaaTCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCAACGAGGGt > 1:2559693/1‑151 (MQ=255) aaaaTCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCAACGAGGGt < 1:2180075/151‑1 (MQ=255) aaaaTCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCAACGAGGGt > 1:3187971/1‑151 (MQ=255) aaaaTCTTTTCCATGTCTACTCCCACCGCCCTGTCCGAAACCATCCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCAACGAGGGt < 1:167929/151‑1 (MQ=255) aaTCTTTTCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggcttactatatccactatgtagttgttgatggacctgtcaaca > 1:2309439‑M2/1‑24 (MQ=255) ttttCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGCTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCAACGAGGGTCAATTa > 1:3266011/1‑151 (MQ=255) ttCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCAACGAGGGTCAATTATg < 1:1803105/151‑1 (MQ=255) ttCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggcttactatatccactatgtagttgttgatggacctgtcaacataaact < 1:599749‑M2/151‑134 (MQ=255) ttCCATGCCTATTCCCACgatccatgcctgggaggctctgtatagagaaagagaacctcttggacttgaacccagacttatttccgaatggaatcttgtccggcttactatatccactatgtagttgttgatggacctgtcaacataaact < 1:903899‑M2/151‑134 (MQ=255) tCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCAACGAGGGTCAATTATGc > 1:2103899/1‑151 (MQ=255) tCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCAACGAGGGTCAATTATGc > 1:81094/1‑151 (MQ=255) tCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCAACGAGGGTCAATTATGc > 1:2648/1‑151 (MQ=255) aTGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCAACGAGGGTCAATTATGCTcc > 1:2782748/1‑151 (MQ=255) | AGTTTTGACAAAGCCTCTTTTCTTGTCCATAGAATTGTACTCTGCACACAATATTCATCAGTATTTCCAAAACTCTTTAGAATCTTTTCCTCTCTTTCGGAAAAGAAATACTTTATCAATGCATCCTCGGGCAAAAAAATCTTTTCCATGTCTATTCCCACCGCCCTGTCCGAAACCATTCCGATACAATACGGAAACGCATGGGTTATTGATACACCCATGTCAGAATACTGGAGAATGAAAGGGGCCGAATCAGCCCCTTTGAGCACATCCAGGCAACGAGGGTCAATTATGCTCCG > CP002416/2463879‑2464177 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |