Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0024161,568,1230TG30.1% 215.9 / 15.9 105G201G (GGT→GGG) Clo1313_1323DNA primase
Reads supporting (aligned to +/- strand):  ref base T (20/52);  new base G (31/0);  total (53/52)
Fisher's exact test for biased strand distribution p-value = 3.94e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 114 total aligned reads displayed.

AGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTAAACTTTGCCAAG  >  CP002416/1567973‑1568273
                                                                                                                                                       |                                                                                                                                                           
aGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGt                                                                                                                                                             <  1:1352844/151‑1 (MQ=255)
 gCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTa                                                                                                                                                            <  1:1174793/151‑1 (MQ=255)
  ccAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAg                                                                                                                                                           <  1:2420306/151‑1 (MQ=255)
   cAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGAAAGG‑GTCAGAGGTAgg                                                                                                                                                          >  1:3365422/1‑150 (MQ=255)
    aGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGaa                                                                                                                                                         <  1:1898400/151‑1 (MQ=255)
               tttAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGATAGG‑TTCAAAGGTGGaaattatttttta                                                                                                                                              >  1:1600278/1‑140 (MQ=255)
                 tAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAat                                                                                                                                           <  1:1447890/151‑1 (MQ=255)
                  aGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAata                                                                                                                                          <  1:418928/151‑1 (MQ=255)
                     cTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATAttt                                                                                                                                       <  1:2718296/151‑1 (MQ=255)
                     cTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGGTATTATGACAGG‑GTTAGAGGGAGGATTATATTT‑TCAATAttt                                                                                                                                       >  1:2531392/1‑151 (MQ=255)
                      tATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCCGAGGGAGAATTATATTT‑TCAATAtttt                                                                                                                                      >  1:58635/1‑150 (MQ=255)
                       aTTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑a                                                                                                                                   <  1:1697502/151‑1 (MQ=255)
                         tCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATTACAGG‑GTTAGGGGGAGAATTATATTT‑TCAATAttttgtt                                                                                                                                   >  1:3152797/1‑147 (MQ=255)
                         tCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAAG‑GTCAGAGGGAGAATTATATTT‑TCAATATTT‑G‑Att                                                                                                                                 >  1:2240648/1‑151 (MQ=255)
                           gCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTa                                                                                                                               <  1:599147/151‑1 (MQ=255)
                           gCCGGAAGAATGGGACGCGCTATACAATCATGTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGGAGAATTATATTT‑TCAATATTT‑G‑Atttg                                                                                                                               >  1:2911708/1‑150 (MQ=255)
                            ccGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTa‑a                                                                                                                             <  1:761031/151‑1 (MQ=255)
                            ccGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGAAAGG‑TTCAGAGGTAGAATTATATTT‑CCAAAATTT‑T‑Atttta                                                                                                                              >  1:1333543/1‑149 (MQ=255)
                             cGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTATTACAGG‑CTCAGAGGTAGGAATATATTT‑TCAACAttttgttttag                                                                                                                               >  1:508550/1‑143 (MQ=255)
                             cGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGAACGG‑GTCAGAGGGAGAAATATATTT‑TCAAtattt‑t‑attttaa                                                                                                                             >  1:791109/1‑148 (MQ=255)
                             cGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGATATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑TCAATATTT‑G‑Attttag                                                                                                                             >  1:938601/1‑148 (MQ=255)
                               gaagaaTGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTTAGAGGTGGAAATATATTT‑TCAATAATT‑T‑ATTTT‑Aggg                                                                                                                          >  1:1537709/1‑151 (MQ=255)
                                aagaaTGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑Agggg                                                                                                                         <  1:1172860/151‑1 (MQ=255)
                                  gaaTGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGaa                                                                                                                       <  1:2718390/151‑1 (MQ=255)
                                     tGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATg                                                                                                                    <  1:1891/151‑1 (MQ=255)
                                     tGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATg                                                                                                                    <  1:1440601/151‑1 (MQ=255)
                                       ggACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTa                                                                                                                  <  1:2665604/151‑1 (MQ=255)
                                          cgcgCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTTAGAGGGAGAAATATATTT‑TCAATATTT‑G‑ATTTT‑AGGGGGAATGTAA‑tt                                                                                                              >  1:3465287/1‑151 (MQ=255)
                                            cgcTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTATTAAAGG‑TTCCGAGGGAGAAATTTATTT‑TCTATATTT‑G‑ATTTT‑AGGGGGAATGAAA‑TTgg                                                                                                            >  1:809184/1‑151 (MQ=255)
                                              cTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTTACAGGGTTC‑GAGGGAGAAATTTATTT‑TCCATATTT‑T‑ATTTTTAGGGGAA‑TGTAA‑ATGGtt                                                                                                          >  1:3182700/1‑151 (MQ=255)
                                                ataCAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGtttt                                                                                                        <  1:3058791/151‑1 (MQ=255)
                                                   cAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATTACAGG‑GTTAGAGGGAGAATTTTATTT‑TCTATATTT‑T‑ATTTT‑AGGGGAAAAGTAA‑TTGGTTTtggg                                                                                                     >  1:1867822/1‑150 (MQ=255)
                                                    aaTCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTtggtg                                                                                                    <  1:613615/151‑1 (MQ=255)
                                                      tCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGa                                                                                                  <  1:2080239/151‑1 (MQ=255)
                                                      tCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑TCAATATTT‑T‑ATTTT‑AGGGGAAATGGAA‑TTTGTTTtggtggg                                                                                                  >  1:399259/1‑150 (MQ=255)
                                                          ttAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTGAAAGG‑GTCAGAGGGAGAATTATATTT‑CCCAAATTT‑GGATTTA‑AGGG‑AAATGTAA‑TTGGGTTtggggggagaa                                                                                              >  1:585057/1‑143 (MQ=255)
                                                           tAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTATGACAGG‑GTCAGAGGTAGAATTATATTT‑TCAATATTT‑T‑ATTTT‑AGGGGGAATGTAA‑TTGGTTTTTGTGGAAGAGt                                                                                             >  1:311879/1‑151 (MQ=255)
                                                           tAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTTAGAGGTAGAATTATATTT‑CCCATATTT‑G‑ATTTT‑AGGGGGAATGTAA‑TTGGTTTTGGTGGAagagg                                                                                             >  1:751944/1‑150 (MQ=255)
                                                             aGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTcc                                                                                           <  1:485891/151‑1 (MQ=255)
                                                               gAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTGACAGG‑GGCAGAGGGAGAATTATATTTTCCAA‑ATTT‑G‑TTTTT‑AGGGGAAATGTAA‑TTGGGTTTGGTGGGAGAGTCCTg                                                                                         >  1:2662593/1‑151 (MQ=255)
                                                               gAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTg                                                                                         <  1:1980616/151‑1 (MQ=255)
                                                                   aaaGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATa                                                                                     <  1:2334997/151‑1 (MQ=255)
                                                                   aaaGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGACGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATa                                                                                     <  1:3217251/151‑1 (MQ=255)
                                                                    aaGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑CCAATATTT‑T‑ATTTT‑AGGGGGAATGTAA‑TTGGGTTTGGGGGAAGAGTCCTGGATaa                                                                                    >  1:1820712/1‑151 (MQ=255)
                                                                       gTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTc                                                                                 <  1:1386979/151‑1 (MQ=255)
                                                                       gTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑CCAATATTT‑G‑ATTTT‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTc                                                                                 >  1:542905/1‑151 (MQ=255)
                                                                        ttATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCt                                                                                <  1:2672191/151‑1 (MQ=255)
                                                                         tATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTa                                                                               <  1:1292205/151‑1 (MQ=255)
                                                                         tATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑CCAATATTT‑T‑ATTTT‑AGGGGGAATGTAA‑TTTGTTTTTGTGGAAGAGTCCTGGATAAtttta                                                                               >  1:161747/1‑148 (MQ=255)
                                                                          atgatgatgAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATTACAGG‑GTCAGAGGGAGAATTATATTT‑TCAATATTT‑T‑ATTTA‑AGGGGGGATGTAA‑ATGGTTTTGGTGGGAGAGTGCTGGGTaaatttac                                                                              >  1:3234603/1‑145 (MQ=255)
                                                                              tgatgaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑CCAATATTT‑T‑ATTTA‑AGGGGGAATGTAA‑TTGGTTTTTGTGGAAAAGTCCTGGGTAATTTTACTCCa                                                                          >  1:3044098/1‑151 (MQ=255)
                                                                                atgaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCaaa                                                                        <  1:2006721/151‑1 (MQ=255)
                                                                                 tgaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTTTGATAGG‑TTCAGAGGGAGAATTATATTT‑CCAATATTT‑G‑TTTTT‑AGGGGGAATGTAA‑TTGGGTTTGGGGGGAAAGGCCTGGATAATTCTACTCCAAAg                                                                       >  1:137051/1‑151 (MQ=255)
                                                                                 tgaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAg                                                                       <  1:917735/151‑1 (MQ=255)
                                                                                  gaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTTTTAAAGG‑GTTAGGGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AAGGGGAATGGAA‑TTGGGTTTGGTGGGAGAGTCCTGGGTAAATTTACTCCAAAgg                                                                      >  1:356453/1‑150 (MQ=255)
                                                                                  gaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGt                                                                      <  1:2179958/151‑1 (MQ=255)
                                                                                   aaaTACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTGACAGG‑GTCAGAGGGAGAAATATAATT‑TCAAAATTT‑G‑ATTTT‑AGGGGGAAAGGAA‑TTGGGTTTGGGGGAAGAGGTCTGGATAATTCTACTCCaaaata                                                                     >  1:371845/1‑148 (MQ=255)
                                                                                    aaTACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCCGAGGGAGAATTATATTT‑TCAATATTT‑G‑GTTTT‑AGGGGGAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTCGGTAATTTTTCTCCCAAGtat                                                                    >  1:1408515/1‑151 (MQ=255)
                                                                                    aaTACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATAACAGG‑GTTTGGGGGAGAATTAAATTTACTAAAATTT‑A‑ATTTA‑AGGG‑AAATGGAA‑TTGGTTTTGGTGGAAGAGGCCTCGTTAATTCTACTCCCAAgaat                                                                    >  1:1707219/1‑148 (MQ=255)
                                                                                      tACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTTAGAGGGAGAATTATATTT‑CCAATATTT‑G‑ATTTT‑AGGGGGAATGGAA‑ATGGGTTTGGGGGGAGAATCCTGGGTAAATTTACTTCAAAGAatat                                                                  >  1:2848172/1‑151 (MQ=255)
                                                                                       aCTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTGATAGG‑TTTAGAGGTAGAAATATATTT‑CTAATATTT‑G‑ATTTA‑AGGGGGAATGTAA‑TTGGGTTTGGTGGAAGAGTCCCGGGTAATTCTACCTCAAAGTATATg                                                                 >  1:1144436/1‑151 (MQ=255)
                                                                                       aCTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑CCCATATTT‑T‑ATTTA‑AGGGGGAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATg                                                                 >  1:3159337/1‑151 (MQ=255)
                                                                                        cTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTATGACCGG‑GTCAGAGGGAGAATTATATTT‑CCAATATTT‑T‑ATTTT‑AGGGGGAATGTAAATGGGTTTTGGGGGAA‑AGTTCTGGATAATTTTACTCCAAAGGATATgg                                                                >  1:871533/1‑150 (MQ=255)
                                                                                         ttttAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGAATTATATTT‑TCAATATTT‑T‑ATTTA‑AGGGGGAAAGTAA‑ATGGTTTTGGTGGGAAAGGTCTGGATAATTTTACTCCAAAGAATATGaa                                                               >  1:1158075/1‑151 (MQ=255)
                                                                                          tttAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAAc                                                              <  1:3257243/151‑1 (MQ=255)
                                                                                           ttAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGCTATTATGAAAGG‑GTCAGAGGCAGAATTATATTT‑CCCATATTT‑G‑TTTTA‑AGGGGAAATGTAA‑TTGGGTTTGGTGGAAGAGTCCTGGGTAATTCTACTTCCAAGAATATGaaat                                                             >  1:1151122/1‑149 (MQ=255)
                                                                                            tAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTATGAAAGG‑TTTAGAGGTAGAATTATATTT‑CCAAAATTT‑T‑ATTTT‑AGGGGGAAAGTAA‑TTGGGTTTGGTGGGAGAGTCCTGGATAATTCTACTCCAAAGTATATGaaatc                                                            >  1:2968749/1‑148 (MQ=255)
                                                                                                  gCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGAATTATATTT‑CCCATATTT‑T‑TTTTA‑AGGGGGAATGTAA‑TTGGGTTTTGTGGAAAAGTCCTGGATAATTCTAAACCAAAGTATATGAAATCCCCggg                                                      >  1:2143433/1‑150 (MQ=255)
                                                                                                       cTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGt                                                 <  1:763090/151‑1 (MQ=255)
                                                                                                        tGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGGAATGTAA‑TTGGGTTTTGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAAATCCCCGGAAACggt                                                >  1:2214499/1‑149 (MQ=255)
                                                                                                        tGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGGAATGGAA‑TTGGGTTTGGGGGAAGAGGCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCgggaaaggt                                                >  1:2443000/1‑144 (MQ=255)
                                                                                                          atattAAAAGGAAAAACCGGCGGTTATTATGACAGG‑TTCAGAAGTAGAATTATATTT‑CCAATGCTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGCATCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTgg                                              <  1:1124553/148‑1 (MQ=255)
                                                                                                          aTTTTAAAAGGAAAAAACGGCGGTTATTTTGACAGG‑TTCAGAGGTAGAATTATATTT‑TCAAAATTT‑T‑ATTTT‑AGGGGGAATGTAA‑TTGGTTTTTGTGGGAGAAGCCTGGATAATTTTACTCCAAAGTATATGAACTCCCCGGAAACGtttg                                              >  1:1308381/1‑149 (MQ=255)
                                                                                                           ttttAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTCGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGt                                             <  1:3308100/151‑1 (MQ=255)
                                                                                                           ttttAAAAGGAAAAAACGGCGGTTACTATTACAGG‑TTCACAGGCTGAATTTTATTT‑CCCAACTTT‑G‑ATTTA‑CGGGGAAACGGAA‑TTGGTTTTGGTGGAAAAGTGCCGGATAATTTTACTCCAAAGTATATGGACTTCCCGGaaaagctggt                                             >  1:2021684/1‑144 (MQ=255)
                                                                                                            tttAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑CCAATATTT‑T‑ATTTA‑AGGGGAAATGTAA‑ATGGTTTTGGTGGGAGAGTCCTGGATAAATTTACTCCAAAATATATGAAATCCCCGGGAAAGTTGGtt                                            >  1:1015544/1‑151 (MQ=255)
                                                                                                             ttAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGttt                                           <  1:2279763/151‑1 (MQ=255)
                                                                                                              tAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGAATTATATTT‑CCAATATTTTG‑TTTTA‑AGGGGAA‑TGTGA‑TTGGTTTTTGGGGGAGAAGCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGaaaaggtgggttt                                          >  1:213050/1‑141 (MQ=255)
                                                                                                               aaaaGGAAAAAACGGCGGTTATTATGACAGG‑GTTAGAGGTAGAATTATATTT‑TCAATATTT‑T‑TTTTT‑AGGGGGAAAGTAA‑TTGGGTTTGGTGGGAGAGGCCTGGATAATTTTAATCCAAAAAATATGAACTCCCCGGGAACGTTgggtttc                                         >  1:3060672/1‑146 (MQ=255)
                                                                                                                aaaGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACa                                        <  1:3228263/151‑1 (MQ=255)
                                                                                                                  aGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAAt                                      <  1:2203044/151‑1 (MQ=255)
                                                                                                                   ggAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATa                                     <  1:688317/151‑1 (MQ=255)
                                                                                                                   ggAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATa                                     <  1:2185466/151‑1 (MQ=255)
                                                                                                                       aaaaCGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAg                                 <  1:1999658/151‑1 (MQ=255)
                                                                                                                        aaaCGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAgg                                <  1:419146/151‑1 (MQ=255)
                                                                                                                          aCGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGaa                              <  1:2800206/151‑1 (MQ=255)
                                                                                                                           cggcggTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGaaa                             <  1:1945325/151‑1 (MQ=255)
                                                                                                                              cggTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAAt                          <  1:2027294/151‑1 (MQ=255)
                                                                                                                              cggTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAAt                          <  1:2187740/151‑1 (MQ=255)
                                                                                                                                gTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAAttt                        >  1:2586449/1‑151 (MQ=255)
                                                                                                                                   attatGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGTACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTa                     >  1:1810475/1‑151 (MQ=255)
                                                                                                                                   attatGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTa                     <  1:2406491/151‑1 (MQ=255)
                                                                                                                                    ttatGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTAc                    <  1:1454902/151‑1 (MQ=255)
                                                                                                                                     tatGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACg                   <  1:2936702/151‑1 (MQ=255)
                                                                                                                                          cAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTa              >  1:3321708/1‑151 (MQ=255)
                                                                                                                                           aGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTaa             >  1:3313022/1‑151 (MQ=255)
                                                                                                                                           aGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTCTACAATAAAAGGAAAAATTTGTACGGCTTaa             >  1:2860082/1‑151 (MQ=255)
                                                                                                                                                  agagGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTAAACTTTg       <  1:739743/151‑1 (MQ=255)
                                                                                                                                                       tAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTAAACTTTGCCAAg  >  1:1423223/1‑151 (MQ=255)
                                                                                                                                                       tAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTAAACTTTGCCAAg  >  1:1214211/1‑151 (MQ=255)
                                                                                                                                                       |                                                                                                                                                           
AGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑G‑ATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTAAACTTTGCCAAG  >  CP002416/1567973‑1568273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑