Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0024161,568,1150TG31.5% 211.9 / 23.0 109F199V (TTC→GTC) Clo1313_1323DNA primase
Reads supporting (aligned to +/- strand):  ref base T (20/54);  new base G (34/0);  total (55/54)
Fisher's exact test for biased strand distribution p-value = 4.74e-14
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 115 total aligned reads displayed.

AGCATAGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTAA  >  CP002416/1567968‑1568262
                                                                                                                                                    |                                                                                                                                                       
aGCATAGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCa                                                                                                                                                      <  1:2235404/151‑1 (MQ=255)
  cATAGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCaga                                                                                                                                                    <  1:645164/151‑1 (MQ=255)
    tAGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGAAAAAAACGGCGGTTATTATGACAGG‑TTCAGAgg                                                                                                                                                  <  1:1423438/151‑1 (MQ=255)
     aGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGt                                                                                                                                                 <  1:1352844/151‑1 (MQ=255)
     aGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATAAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTGAAAGG‑GTCAGAggg                                                                                                                                                 >  1:3086027/1‑150 (MQ=255)
      gCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTATGACCGG‑GTCAGAggga                                                                                                                                                >  1:162344/1‑149 (MQ=255)
      gCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTa                                                                                                                                                <  1:285974/151‑1 (MQ=255)
      gCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTa                                                                                                                                                <  1:1174793/151‑1 (MQ=255)
       ccAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAg                                                                                                                                               <  1:2420306/151‑1 (MQ=255)
        cAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGAAAGG‑GTCAGAGGTAgg                                                                                                                                              >  1:3365422/1‑150 (MQ=255)
         aGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGaa                                                                                                                                             <  1:1898400/151‑1 (MQ=255)
                  ggTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATTACAAG‑TTTAGAGGGGGAATTATAtttt                                                                                                                                    >  1:572936/1‑150 (MQ=255)
                    tttAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGATAGG‑TTCAAAGGTGGaaattatttttta                                                                                                                                  >  1:1600278/1‑140 (MQ=255)
                      tAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAat                                                                                                                               <  1:1447890/151‑1 (MQ=255)
                       aGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAata                                                                                                                              <  1:418928/151‑1 (MQ=255)
                          cTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGGTATTATGACAGG‑GTTAGAGGGAGGATTATATTT‑TCAATAttt                                                                                                                           >  1:2531392/1‑151 (MQ=255)
                           tATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCCGAGGGAGAATTATATTT‑TCAATAtttt                                                                                                                          >  1:58635/1‑150 (MQ=255)
                            aTTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑Ga                                                                                                                        <  1:1697502/151‑1 (MQ=255)
                              tCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAAG‑GTCAGAGGGAGAATTATATTT‑TCAATATTT‑GAtt                                                                                                                      >  1:2240648/1‑151 (MQ=255)
                                gCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTa                                                                                                                    <  1:599147/151‑1 (MQ=255)
                                gCCGGAAGAATGGGACGCGCTATACAATCATGTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGGAGAATTATATTT‑TCAATATTT‑GAtttg                                                                                                                    >  1:2911708/1‑150 (MQ=255)
                                 ccGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGAAAGG‑TTCAGAGGTAGAATTATATTT‑CCAAAATTT‑TAtttta                                                                                                                   >  1:1333543/1‑149 (MQ=255)
                                  cGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTATTACAGG‑CTCAGAGGTAGGAATATATTT‑TCAACAttttgttttag                                                                                                                   >  1:508550/1‑143 (MQ=255)
                                  cGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGAACGG‑GTCAGAGGGAGAAATATATTT‑TCAAtattt‑tattttaa                                                                                                                  >  1:791109/1‑148 (MQ=255)
                                  cGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGATATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑TCAATATTT‑GAttttag                                                                                                                  >  1:938601/1‑148 (MQ=255)
                                    gaagaaTGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTTAGAGGTGGAAATATATTT‑TCAATAATT‑TATTTT‑Aggg                                                                                                               >  1:1537709/1‑151 (MQ=255)
                                     aagaaTGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑Agggg                                                                                                              <  1:1172860/151‑1 (MQ=255)
                                       gaaTGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGaa                                                                                                            <  1:2718390/151‑1 (MQ=255)
                                          tGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATg                                                                                                         <  1:1440601/151‑1 (MQ=255)
                                            ggACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTa                                                                                                       <  1:2665604/151‑1 (MQ=255)
                                               cgcgCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTTAGAGGGAGAAATATATTT‑TCAATATTT‑GATTTT‑AGGGGGAATGTAA‑tt                                                                                                   >  1:3465287/1‑151 (MQ=255)
                                                 cgcTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTATTAAAGG‑TTCCGAGGGAGAAATTTATTT‑TCTATATTT‑GATTTT‑AGGGGGAATGAAA‑TTgg                                                                                                 >  1:809184/1‑151 (MQ=255)
                                                   cTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTTACAGGGTTC‑GAGGGAGAAATTTATTT‑TCCATATTT‑TATTTTTAGGGGAA‑TGTAA‑ATGGtt                                                                                               >  1:3182700/1‑151 (MQ=255)
                                                     ataCAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGtttt                                                                                             <  1:3058791/151‑1 (MQ=255)
                                                       aCAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑CCCATATTT‑GATTTT‑AGGGGAAATGTAA‑TTGGGTTtgg                                                                                           >  1:758675/1‑151 (MQ=255)
                                                        cAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATTACAGG‑GTTAGAGGGAGAATTTTATTT‑TCTATATTT‑TATTTT‑AGGGGAAAAGTAA‑TTGGTTTtggg                                                                                          >  1:1867822/1‑150 (MQ=255)
                                                         aaTCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTtggtg                                                                                         <  1:613615/151‑1 (MQ=255)
                                                           tCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGa                                                                                       <  1:2080239/151‑1 (MQ=255)
                                                           tCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑TCAATATTT‑TATTTT‑AGGGGAAATGGAA‑TTTGTTTtggtggg                                                                                       >  1:399259/1‑150 (MQ=255)
                                                                tAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTATGACAGG‑GTCAGAGGTAGAATTATATTT‑TCAATATTT‑TATTTT‑AGGGGGAATGTAA‑TTGGTTTTTGTGGAAGAGt                                                                                  >  1:311879/1‑151 (MQ=255)
                                                                tAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGt                                                                                  <  1:2117835/151‑1 (MQ=255)
                                                                tAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTTAGAGGTAGAATTATATTT‑CCCATATTT‑GATTTT‑AGGGGGAATGTAA‑TTGGTTTTGGTGGAagagg                                                                                  >  1:751944/1‑150 (MQ=255)
                                                                  aGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTcc                                                                                <  1:485891/151‑1 (MQ=255)
                                                                    gAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTGACAGG‑GGCAGAGGGAGAATTATATTTTCCAA‑ATTT‑GTTTTT‑AGGGGAAATGTAA‑TTGGGTTTGGTGGGAGAGTCCTg                                                                              >  1:2662593/1‑151 (MQ=255)
                                                                    gAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTg                                                                              <  1:1980616/151‑1 (MQ=255)
                                                                        aaaGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATa                                                                          <  1:2334997/151‑1 (MQ=255)
                                                                        aaaGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGACGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATa                                                                          <  1:3217251/151‑1 (MQ=255)
                                                                         aaGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑CCAATATTT‑TATTTT‑AGGGGGAATGTAA‑TTGGGTTTGGGGGAAGAGTCCTGGATaa                                                                         >  1:1820712/1‑151 (MQ=255)
                                                                            gTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTc                                                                      <  1:1386979/151‑1 (MQ=255)
                                                                            gTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑CCAATATTT‑GATTTT‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTc                                                                      >  1:542905/1‑151 (MQ=255)
                                                                             ttATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCt                                                                     <  1:2672191/151‑1 (MQ=255)
                                                                              tATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTa                                                                    <  1:1292205/151‑1 (MQ=255)
                                                                               atgatgatgAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATTACAGG‑GTCAGAGGGAGAATTATATTT‑TCAATATTT‑TATTTA‑AGGGGGGATGTAA‑ATGGTTTTGGTGGGAGAGTGCTGGGTaaatttac                                                                   >  1:3234603/1‑145 (MQ=255)
                                                                                   tgatgaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑CCAATATTT‑TATTTA‑AGGGGGAATGTAA‑TTGGTTTTTGTGGAAAAGTCCTGGGTAATTTTACTCCa                                                               >  1:3044098/1‑151 (MQ=255)
                                                                                     atgaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCaaa                                                             <  1:2006721/151‑1 (MQ=255)
                                                                                      tgaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTTTGATAGG‑TTCAGAGGGAGAATTATATTT‑CCAATATTT‑GTTTTT‑AGGGGGAATGTAA‑TTGGGTTTGGGGGGAAAGGCCTGGATAATTCTACTCCAAAg                                                            >  1:137051/1‑151 (MQ=255)
                                                                                      tgaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAg                                                            <  1:917735/151‑1 (MQ=255)
                                                                                       gaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTTTTAAAGG‑GTTAGGGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AAGGGGAATGGAA‑TTGGGTTTGGTGGGAGAGTCCTGGGTAAATTTACTCCAAAgg                                                           >  1:356453/1‑150 (MQ=255)
                                                                                       gaAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGt                                                           <  1:2179958/151‑1 (MQ=255)
                                                                                         aaTACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGtat                                                         <  1:361387/151‑1 (MQ=255)
                                                                                         aaTACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCCGAGGGAGAATTATATTT‑TCAATATTT‑GGTTTT‑AGGGGGAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTCGGTAATTTTTCTCCCAAGtat                                                         >  1:1408515/1‑151 (MQ=255)
                                                                                         aaTACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATAACAGG‑GTTTGGGGGAGAATTAAATTTACTAAAATTT‑AATTTA‑AGGG‑AAATGGAA‑TTGGTTTTGGTGGAAGAGGCCTCGTTAATTCTACTCCCAAgaat                                                         >  1:1707219/1‑148 (MQ=255)
                                                                                           tACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTTAGAGGGAGAATTATATTT‑CCAATATTT‑GATTTT‑AGGGGGAATGGAA‑ATGGGTTTGGGGGGAGAATCCTGGGTAAATTTACTTCAAAGAatat                                                       >  1:2848172/1‑151 (MQ=255)
                                                                                            aCTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTTTGATAGG‑TTTAGAGGTAGAAATATATTT‑CTAATATTT‑GATTTA‑AGGGGGAATGTAA‑TTGGGTTTGGTGGAAGAGTCCCGGGTAATTCTACCTCAAAGTATATg                                                      >  1:1144436/1‑151 (MQ=255)
                                                                                            aCTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑CCCATATTT‑TATTTA‑AGGGGGAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATg                                                      >  1:3159337/1‑151 (MQ=255)
                                                                                             cTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTATGACCGG‑GTCAGAGGGAGAATTATATTT‑CCAATATTT‑TATTTT‑AGGGGGAATGTAAATGGGTTTTGGGGGAA‑AGTTCTGGATAATTTTACTCCAAAGGATATgg                                                     >  1:871533/1‑150 (MQ=255)
                                                                                              ttttAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGAATTATATTT‑TCAATATTT‑TATTTA‑AGGGGGAAAGTAA‑ATGGTTTTGGTGGGAAAGGTCTGGATAATTTTACTCCAAAGAATATGaa                                                    >  1:1158075/1‑151 (MQ=255)
                                                                                               tttAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAAc                                                   <  1:3257243/151‑1 (MQ=255)
                                                                                                ttAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGCTATTATGAAAGG‑GTCAGAGGCAGAATTATATTT‑CCCATATTT‑GTTTTA‑AGGGGAAATGTAA‑TTGGGTTTGGTGGAAGAGTCCTGGGTAATTCTACTTCCAAGAATATGaaat                                                  >  1:1151122/1‑149 (MQ=255)
                                                                                                 tAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTTTTATGAAAGG‑TTTAGAGGTAGAATTATATTT‑CCAAAATTT‑TATTTT‑AGGGGGAAAGTAA‑TTGGGTTTGGTGGGAGAGTCCTGGATAATTCTACTCCAAAGTATATGaaatc                                                 >  1:2968749/1‑148 (MQ=255)
                                                                                                       gCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGAATTATATTT‑CCCATATTT‑TTTTTA‑AGGGGGAATGTAA‑TTGGGTTTTGTGGAAAAGTCCTGGATAATTCTAAACCAAAGTATATGAAATCCCCggg                                           >  1:2143433/1‑150 (MQ=255)
                                                                                                          gACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAAc                                        <  1:323864/151‑1 (MQ=255)
                                                                                                          gACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGGAAAAATATATTT‑CCAATATTT‑GATTTA‑AGGGGGAATGTAA‑TTGGGTTTGGGGGGAGAATCCTGGATAATTTTACTCCAAAAGAAATGAACTCCCCGGGAAc                                        >  1:2222375/1‑151 (MQ=255)
                                                                                                            cTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGt                                      <  1:763090/151‑1 (MQ=255)
                                                                                                             tGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGGAATGTAA‑TTGGGTTTTGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAAATCCCCGGAAACggt                                     >  1:2214499/1‑149 (MQ=255)
                                                                                                             tGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGGAATGGAA‑TTGGGTTTGGGGGAAGAGGCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCgggaaaggt                                     >  1:2443000/1‑144 (MQ=255)
                                                                                                               atattAAAAGGAAAAACCGGCGGTTATTATGACAGG‑TTCAGAAGTAGAATTATATTT‑CCAATGCTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGCATCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTgg                                   <  1:1124553/148‑1 (MQ=255)
                                                                                                               aTTTTAAAAGGAAAAAACGGCGGTTATTTTGACAGG‑TTCAGAGGTAGAATTATATTT‑TCAAAATTT‑TATTTT‑AGGGGGAATGTAA‑TTGGTTTTTGTGGGAGAAGCCTGGATAATTTTACTCCAAAGTATATGAACTCCCCGGAAACGtttg                                   >  1:1308381/1‑149 (MQ=255)
                                                                                                                ttttAAAAGGAAAAAACGGCGGTTACTATTACAGG‑TTCACAGGCTGAATTTTATTT‑CCCAACTTT‑GATTTA‑CGGGGAAACGGAA‑TTGGTTTTGGTGGAAAAGTGCCGGATAATTTTACTCCAAAGTATATGGACTTCCCGGaaaagctggt                                  >  1:2021684/1‑144 (MQ=255)
                                                                                                                 tttAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAATTATATTT‑CCAATATTT‑TATTTA‑AGGGGAAATGTAA‑ATGGTTTTGGTGGGAGAGTCCTGGATAAATTTACTCCAAAATATATGAAATCCCCGGGAAAGTTGGtt                                 >  1:1015544/1‑151 (MQ=255)
                                                                                                                 tttAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGGAGAAATATATTT‑TCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGGTTTGGTGGAAGAGTCCTGGATAATTTTACTCCAAAGTATATGAACTCCCCGGGAACGTTgggt                                 >  1:3093011/1‑149 (MQ=255)
                                                                                                                  ttAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGttt                                <  1:2279763/151‑1 (MQ=255)
                                                                                                                   tAAAAGGAAAAAACGGCGGTTATTATGACAGG‑GTCAGAGGTAGAATTATATTT‑CCAATATTTTGTTTTA‑AGGGGAA‑TGTGA‑TTGGTTTTTGGGGGAGAAGCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGaaaaggtgggttt                               >  1:213050/1‑141 (MQ=255)
                                                                                                                    aaaaGGAAAAAACGGCGGTTATTATGACAGG‑GTTAGAGGTAGAATTATATTT‑TCAATATTT‑TTTTTT‑AGGGGGAAAGTAA‑TTGGGTTTGGTGGGAGAGGCCTGGATAATTTTAATCCAAAAAATATGAACTCCCCGGGAACGTTgggtttc                              >  1:3060672/1‑146 (MQ=255)
                                                                                                                     aaaGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACa                             <  1:3228263/151‑1 (MQ=255)
                                                                                                                       aGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAAt                           <  1:2203044/151‑1 (MQ=255)
                                                                                                                        ggAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATa                          <  1:2185466/151‑1 (MQ=255)
                                                                                                                        ggAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATa                          <  1:688317/151‑1 (MQ=255)
                                                                                                                            aaaaCGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAg                      <  1:1999658/151‑1 (MQ=255)
                                                                                                                             aaaCGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAgg                     <  1:1936895/151‑1 (MQ=255)
                                                                                                                             aaaCGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAgg                     <  1:419146/151‑1 (MQ=255)
                                                                                                                               aCGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGaa                   <  1:2800206/151‑1 (MQ=255)
                                                                                                                                cggcggTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGaaa                  <  1:1945325/151‑1 (MQ=255)
                                                                                                                                     gTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAAttt             >  1:2586449/1‑151 (MQ=255)
                                                                                                                                        attatGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGTACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTa          >  1:1810475/1‑151 (MQ=255)
                                                                                                                                         ttatGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTAc         <  1:1454902/151‑1 (MQ=255)
                                                                                                                                           atGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACgg       >  1:1696122/1‑151 (MQ=255)
                                                                                                                                               cAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTa   >  1:3321708/1‑151 (MQ=255)
                                                                                                                                                aGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTaa  >  1:3313022/1‑151 (MQ=255)
                                                                                                                                                aGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTCTACAATAAAAGGAAAAATTTGTACGGCTTaa  >  1:2860082/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                       
AGCATAGCCAGAAAATTTGGTTTAGGCTATTCGCCGGAAGAATGGGACGCGCTATACAATCATTTAAGGAAAAAAGGTTATGATGATGAAATACTTTTAGACAGCGGACTGATTTTAAAAGGAAAAAACGGCGGTTATTATGACAGG‑TTCAGAGGTAGAATTATATTT‑CCAATATTT‑GATTTA‑AGGGGAAATGTAA‑TTGGTTTTGGTGGAAGAGTCCTGGATAATTCTACTCCAAAGTATATGAACTCCCCGGAAACGTTGGTTTACAATAAAAGGAAAAATTTGTACGGTTTAA  >  CP002416/1567968‑1568262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑