| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP002416 | 2934344 = | NA (NA) | 116 (0.800) | 92/298 | 0.9 | 99.2% | intergenic (‑56/‑74) | Clo1313_2507/Clo1313_2508 | hypothetical protein/transposase mutator type |
| ? | CP002416 | = 2935862 | 1 (0.010) | coding (671/687 nt) | Clo1313_2509 | hypothetical protein | |||||
Only 100 of 131 total aligned reads displayed.
CAAATTTTTCTTTTGTAAGAATTTCTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGCAAATATATCATTTTTGTCAAAATACCCTACAGCCCCTCCCCAATCTTCCGGTTTAGTTCTCTTCCAAATTGCGTATGTATTGTATCCATAATCTGGGTCAACTATAGGTATTATTACATTAAGTTGATCTCCTATTATCTCATAATAAG > CP002416/2935714‑2936012 | cAAATTTTTCTTTTGTAAGAATTTCTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGag < 1:3200718‑M2/151‑3 (MQ=255)cAAATTTTTCTTTTGTAAGAATTTCTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGag > 1:3181902‑M2/1‑149 (MQ=255) aaaTTTTTCTTTTGTAAGAATTTCTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGaga > 1:793048‑M2/1‑148 (MQ=255) ttttGTAAGAATTTCTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaat < 1:560665‑M2/151‑13 (MQ=255) tttGTAAGAATTTCTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaata > 1:1803862‑M2/1‑138 (MQ=255) gTAAGAATTTCTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattt < 1:3144441‑M2/151‑17 (MQ=255) tAAGAATTTCTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatatttt > 1:1076508‑M2/1‑134 (MQ=255) tAAGAATTTCTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatatttt > 1:3441286‑M2/1‑134 (MQ=255) aGAATTTCTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttat > 1:926886‑M2/1‑132 (MQ=255) aTTTCTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgta > 1:684006‑M2/1‑129 (MQ=255) ttCTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaa > 1:250654‑M2/1‑127 (MQ=255) cTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaagt > 1:275080‑M2/1‑125 (MQ=255) cTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaact < 1:1541829‑M2/151‑27 (MQ=255) aGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattga < 1:1550898‑M2/151‑33 (MQ=255) gAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgac > 1:1762364‑M2/1‑118 (MQ=255) tCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactcctt > 1:1051009‑M2/1‑113 (MQ=255) cTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttc > 1:1681358‑M2/1‑112 (MQ=255) tGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatg > 1:471596‑M2/1‑108 (MQ=255) gAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatga < 1:2816488‑M2/151‑45 (MQ=255) aaTCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgat < 1:2482558‑M2/151‑46 (MQ=255) cTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgataga < 1:2654762‑M2/151‑49 (MQ=255) ataAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaat < 1:1447952‑M2/151‑51 (MQ=255) aaaaTTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataa < 1:1487376‑M2/151‑53 (MQ=255) aTTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataa < 1:1038077‑M2/151‑56 (MQ=255) aCAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtat < 1:3203298‑M2/151‑61 (MQ=255) cAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtata > 1:2511837‑M2/1‑90 (MQ=255) cAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtata > 1:1650616‑M2/1‑90 (MQ=255) aaaGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtatag < 1:310317‑M2/151‑63 (MQ=255) aaGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtatagg > 1:73697‑M2/1‑88 (MQ=255) aGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtatagga < 1:1436002‑M2/151‑65 (MQ=255) gCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagcataggag < 1:278031‑M2/151‑66 (MQ=255) cAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggagg < 1:2326188‑M2/151‑67 (MQ=255) aGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggagga < 1:3346104‑M2/151‑68 (MQ=255) aGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggagga > 1:2156120‑M2/1‑84 (MQ=255) gACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAGAATATGTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggag > 1:1572930‑M2/1‑83 (MQ=255) aCTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagt > 1:1008809‑M2/1‑82 (MQ=255) tttCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttt > 1:2916868‑M2/1‑80 (MQ=255) gTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatg < 1:2978117‑M2/151‑78 (MQ=255) cTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggc < 1:2264711‑M2/151‑80 (MQ=255) cTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggc < 1:1460347‑M2/151‑80 (MQ=255) tAAAATATATTTAAATACTAACATAGTAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgcaaactaattgactccttctatgttagaataataaagaataggaggagttttttatggcaa < 1:291497‑M2/151‑82 (MQ=255) tAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaa < 1:630802‑M2/151‑82 (MQ=255) aaaaTATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaag < 1:345018‑M2/151‑83 (MQ=255) aaaTATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaaga < 1:1839807‑M2/151‑84 (MQ=255) aaTATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaa < 1:3037609‑M2/151‑85 (MQ=255) atatatTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaa > 1:1804244‑M2/1‑66 (MQ=255) atatTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaa < 1:3340918‑M2/151‑88 (MQ=255) atatTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaa > 1:1280206‑M2/1‑64 (MQ=255) tatTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaag < 1:419385‑M2/151‑89 (MQ=255) atTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaagg > 1:1316575‑M2/1‑62 (MQ=255) tttAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaagga > 1:1227710‑M2/1‑61 (MQ=255) tttAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaagga > 1:2632245‑M2/1‑61 (MQ=255) aaaTACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataa < 1:1740757‑M2/151‑94 (MQ=255) aaTACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataat < 1:3152989‑M2/151‑95 (MQ=255) cTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataaca < 1:1583316‑M2/151‑99 (MQ=255) tAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacac < 1:1687145‑M2/151‑100 (MQ=255) aCATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacacca > 1:2054945‑M2/1‑50 (MQ=255) tAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaa > 1:3200717‑M2/1‑47 (MQ=255) tAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaa > 1:1666954‑M2/1‑47 (MQ=255) aGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaa > 1:2287312‑M2/1‑46 (MQ=255) gAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaa > 1:2548693‑M2/1‑45 (MQ=255) gAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaa < 1:2332308‑M2/151‑107 (MQ=255) ggAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaa < 1:1298880‑M2/151‑110 (MQ=255) ggAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaa > 1:1202802‑M2/1‑42 (MQ=255) ggAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaa < 1:2144251‑M2/151‑110 (MQ=255) gAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaa < 1:1180134‑M2/151‑111 (MQ=255) aaaaTTAGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaag < 1:366405‑M2/151‑112 (MQ=255) aaTTAGTTTACACAAAAATATTTACACAGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagag > 1:2388629‑M2/1‑38 (MQ=255) aTTGGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagc > 1:966547‑M2/1‑37 (MQ=255) aGTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagctta < 1:934917‑M2/151‑118 (MQ=255) gTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttat < 1:1092123‑M2/151‑119 (MQ=255) gTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttat < 1:666717‑M2/151‑119 (MQ=255) gTTTACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttat < 1:3071237‑M2/151‑119 (MQ=255) ttACACAAAAATATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatca > 1:17646‑M2/1‑31 (MQ=255) aaaaaTATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatc < 1:667455‑M2/151‑127 (MQ=255) aaaaTATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatct > 1:1420416‑M2/1‑24 (MQ=255) aaaaTATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatct > 1:1013193‑M2/1‑24 (MQ=255) aaaTATTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctc < 1:1602206‑M2/151‑129 (MQ=255) tatTTACACTGCCGCAAAAGCAAATATATCATTTTTGTCAAAATACCCTACAGCCCCTCCCCAATCTTCCGGTTTAGTTCTCTTCCAAATTGCGTATGTATTGTATCCATAATCTGGGTCAACTATAGGTATTATTACATTAAGTTGAtct < 1:1649492/151‑1 (MQ=255) atTTACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcattt < 1:2033546‑M2/151‑133 (MQ=255) tttACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttc < 1:1342083‑M2/151‑134 (MQ=255) tACACTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctg > 1:1393963‑M2/1‑16 (MQ=255) acacTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctga > 1:1282089‑M2/1‑15 (MQ=255) cTGCCGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagta < 1:346113‑M2/151‑140 (MQ=255) ccGCAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaa < 1:3300750‑M2/151‑143 (MQ=255) cAAAAGagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaacat > 1:539461‑M2/1‑6 (MQ=255) aaaGagattttaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaacatta < 1:1275438‑M2/151‑148 (MQ=255) agagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaacattact > 1:1380081‑M2/1‑2 (MQ=255) agagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaacattact < 1:1330721‑M2/151‑150 (MQ=255) agagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaacattact < 1:2607768‑M2/151‑150 (MQ=255) agagattgtaaaatatattatgtaaactaattgtctccttctatgatagaataataaagtataggagaagttttttatggcaagaaaaaggataataacaccagaaaagaaagaacttatcagaattcacatttctgagtacaacatttct > 1:1072440‑M2/1‑2 (MQ=255) gagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaacattactt > 1:48247‑M2/1‑1 (MQ=255) gagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaacattactt < 1:2014571‑M2/151‑151 (MQ=255) gagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaacattactt > 1:1584117‑M2/1‑1 (MQ=255) gagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaacattactt > 1:2055715‑M2/1‑1 (MQ=255) gagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaacattactt > 1:2449274‑M2/1‑1 (MQ=255) gagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaacattactt < 1:1658774‑M2/151‑151 (MQ=255) gagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaacattactt < 1:2552422‑M2/151‑151 (MQ=255) gagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaacattactt < 1:798594‑M2/151‑151 (MQ=255) gagattgtaaaatattttatgtaaactaattgactccttctatgatagaataataaagtataggaggagttttttatggcaagaaaaaggataataacaccagaaaagaaagagcttatcagaaatctcatttctgagtacaacattactt > 1:3074420‑M2/1‑1 (MQ=255) | CAAATTTTTCTTTTGTAAGAATTTCTTATCAGAAATTCTTTTGAATCTATAAAATTTGACAAAGCAGACTTTCGAGTCTTAAAATATATTTAAATACTAACATAGAAGGAAAATTAGTTTACACAAAAATATTTACACTGCCGCAAAAGCAAATATATCATTTTTGTCAAAATACCCTACAGCCCCTCCCCAATCTTCCGGTTTAGTTCTCTTCCAAATTGCGTATGTATTGTATCCATAATCTGGGTCAACTATAGGTATTATTACATTAAGTTGATCTCCTATTATCTCATAATAAG > CP002416/2935714‑2936012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |