BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP002416	1381634 =	0 (0.000)	165 (1.130)	124/300	0.1	70.8%	intergenic (‑1/‑236)	Clo1313_1160/Clo1313_1161	L‑lactate dehydrogenase/competence/damage‑inducible protein CinA
*	?	CP002416	= 2456437	136 (0.930)	165 (1.130)	124/300	0.1	70.8%	intergenic (‑178/+22)	Clo1313_2090/Clo1313_2091	enolase/diguanylate cyclase and metal dependent phosphohydrolase

Only 100 of 304 total aligned reads displayed.

TTTTATATGTTAAAAAATTAACACTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGTTTCAGGATCAAACTGTGTACCGGAATTGTTTTTCAACTCAGCCAG  >  CP002416/2456287‑2456587

ttttATATGTTAAAAAATTAACACTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTcc                                                                                                                                                        >  1:710575/1‑151 (MQ=255)

   tataTGTTAAAAAATTAACACTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCggg                                                                                                                                                     >  1:3449584/1‑151 (MQ=255)

   tataTGTTAAAAAATTAACACTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCatt                                                                                                                                                     >  1:2376649‑M2/1‑148 (MQ=255)

      atGTTAAAAAATTAACACTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattcct                                                                                                                                                  <  1:243186‑M2/151‑7 (MQ=255)

        gTTAAAAAATTAACACTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAAc                                                                                                                                                <  1:2459918/151‑1 (MQ=255)

         ttAAAAAATTAACACTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACa                                                                                                                                               >  1:1126162/1‑151 (MQ=255)

          tAAAAAATTAACACTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcct                                                                                                                                              >  1:1864024‑M2/1‑141 (MQ=255)

             aaaaTTAACACTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcct                                                                                                                                           <  1:323806‑M2/151‑14 (MQ=255)

              aaaTTAACACTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCa                                                                                                                                          >  1:2338083/1‑151 (MQ=255)

              aaaTTAACACTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCa                                                                                                                                          <  1:2633382/151‑1 (MQ=255)

                     cacTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaat                                                                                                                                   <  1:1362639‑M2/151‑22 (MQ=255)

                     cacTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaat                                                                                                                                   >  1:1407898‑M2/1‑130 (MQ=255)

                     cacTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaat                                                                                                                                   <  1:455379‑M2/151‑22 (MQ=255)

                      acTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCttttt                                                                                                                                  <  1:48440/151‑1 (MQ=255)

                        tGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataac                                                                                                                                <  1:2228311‑M2/151‑25 (MQ=255)

                        tGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTa                                                                                                                                >  1:389841/1‑151 (MQ=255)

                         gCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataact                                                                                                                               <  1:1483180‑M2/151‑26 (MQ=255)

                          cATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactg                                                                                                                              >  1:2593977‑M2/1‑125 (MQ=255)

                           aTCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAAt                                                                                                                             >  1:3375743/1‑151 (MQ=255)

                           aTCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAAt                                                                                                                             <  1:2469729/151‑1 (MQ=255)

                            tCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAAtt                                                                                                                            >  1:1377474/1‑151 (MQ=255)

                            tCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAAtt                                                                                                                            >  1:624368/1‑151 (MQ=255)

                            tCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAAtt                                                                                                                            >  1:1954887/1‑151 (MQ=255)

                             ccTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTg                                                                                                                           <  1:1425502/151‑1 (MQ=255)

                                tCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCtt                                                                                                                        <  1:798890/151‑1 (MQ=255)

                                 cTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagca                                                                                                                       <  1:2276505‑M2/151‑34 (MQ=255)

                                     cATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAGCCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattag                                                                                                                   >  1:2281350‑M2/1‑114 (MQ=255)

                                     cATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattag                                                                                                                   >  1:1390068‑M2/1‑114 (MQ=255)

                                     cATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattag                                                                                                                   >  1:464389‑M2/1‑114 (MQ=255)

                                     cATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTtcatca                                                                                                                   <  1:514525/151‑1 (MQ=255)

                                     cATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTtcatca                                                                                                                   <  1:3413185/151‑1 (MQ=255)

                                          tACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCt                                                                                                              >  1:2162692/1‑151 (MQ=255)

                                             cacaAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatatta                                                                                                           >  1:1261141‑M2/1‑106 (MQ=255)

                                                aaaGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatat                                                                                                        <  1:1003086‑M2/151‑49 (MQ=255)

                                                aaaGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatat                                                                                                        >  1:2368677‑M2/1‑103 (MQ=255)

                                                 aaGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatc                                                                                                       <  1:2043641‑M2/151‑50 (MQ=255)

                                                   gTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcct                                                                                                     >  1:1682406‑M2/1‑100 (MQ=255)

                                                     ccAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctac                                                                                                   <  1:501228‑M2/151‑54 (MQ=255)

                                                       aaTTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTa                                                                                                 >  1:1938572/1‑151 (MQ=255)

                                                        aTTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttg                                                                                                >  1:3280633‑M2/1‑95 (MQ=255)

                                                        aTTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttg                                                                                                >  1:382293‑M2/1‑95 (MQ=255)

                                                           aaTAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGAc                                                                                             <  1:209408/151‑1 (MQ=255)

                                                                  aGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaa                                                                                      >  1:2968504‑M2/1‑85 (MQ=255)

                                                                  aGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTcaca                                                                                      >  1:155459/1‑151 (MQ=255)

                                                                   gCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaag                                                                                     >  1:1061041‑M2/1‑84 (MQ=255)

                                                                    cATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagt                                                                                    >  1:3265286‑M2/1‑83 (MQ=255)

                                                                    cATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagt                                                                                    <  1:3048576‑M2/151‑69 (MQ=255)

                                                                    cATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagt                                                                                    <  1:2732087‑M2/151‑69 (MQ=255)

                                                                      tttATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtca                                                                                  <  1:941554‑M2/151‑71 (MQ=255)

                                                                      tttATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtca                                                                                  >  1:42508‑M2/1‑81 (MQ=255)

                                                                      tttATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtca                                                                                  >  1:2809066‑M2/1‑81 (MQ=255)

                                                                          ttGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaa                                                                              <  1:342617‑M2/151‑75 (MQ=255)

                                                                             cAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaattt                                                                           <  1:3310920‑M2/151‑78 (MQ=255)

                                                                             cAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaattt                                                                           <  1:2975450‑M2/151‑78 (MQ=255)

                                                                             cAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTAt                                                                           >  1:1817934/1‑151 (MQ=255)

                                                                              aaaaCCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttt                                                                          <  1:2174612‑M2/151‑79 (MQ=255)

                                                                              aaaaCCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttt                                                                          <  1:3010703‑M2/151‑79 (MQ=255)

                                                                                  ccATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCaaag                                                                      >  1:2416985/1‑150 (MQ=255)

                                                                                  ccATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCaaaa                                                                      >  1:582895/1‑151 (MQ=255)

                                                                                   cATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaa                                                                     <  1:687972‑M2/151‑84 (MQ=255)

                                                                                    aTAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaag                                                                    >  1:3302705‑M2/1‑67 (MQ=255)

                                                                                    aTAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGt                                                                    <  1:1000147/151‑1 (MQ=255)

                                                                                     tAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagt                                                                   >  1:1732188‑M2/1‑66 (MQ=255)

                                                                                      aGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagtt                                                                  <  1:846443‑M2/151‑87 (MQ=255)

                                                                                          tatTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttat                                                              >  1:3120482‑M2/1‑61 (MQ=255)

                                                                                            ttttATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgt                                                            >  1:546140‑M2/1‑59 (MQ=255)

                                                                                            ttttATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgt                                                            >  1:2744900‑M2/1‑59 (MQ=255)

                                                                                              ttATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgt                                                          >  1:2837712‑M2/1‑57 (MQ=255)

                                                                                              ttATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAg                                                          <  1:2671132/151‑1 (MQ=255)

                                                                                               tATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAgg                                                         >  1:1164809/1‑151 (MQ=255)

                                                                                                 tCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaa                                                       >  1:3088696‑M2/1‑54 (MQ=255)

                                                                                                      aaTGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggt                                                  >  1:1884928‑M2/1‑49 (MQ=255)

                                                                                                       aTGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggtt                                                 >  1:1304438‑M2/1‑48 (MQ=255)

                                                                                                           cccATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggttgaat                                             >  1:2207370‑M2/1‑44 (MQ=255)

                                                                                                           cccATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGttt                                             <  1:1200236/151‑1 (MQ=255)

                                                                                                           cccATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGttt                                             >  1:1804152/1‑151 (MQ=255)

                                                                                                               tCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGTTTCAgg                                         <  1:1596618/151‑1 (MQ=255)

                                                                                                                  tAAAACATTTTTTCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggttgaatcggctga                                      >  1:1093880‑M2/1‑37 (MQ=255)

                                                                                                                   aaaaCATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGTTTCAGGATCa                                     <  1:2525707/151‑1 (MQ=255)

                                                                                                                      aCATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGTTTCAGGATCAAAc                                  >  1:803309/1‑151 (MQ=255)

                                                                                                                       cATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGTTTCAGGATCAAACt                                 <  1:47600/151‑1 (MQ=255)

                                                                                                                           ttttCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggttgaatcggctgaaacttttac                             <  1:610510‑M2/151‑124 (MQ=255)

                                                                                                                           ttttCAACATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggttgaatcggctgaaacttttac                             <  1:588163‑M2/151‑124 (MQ=255)

                                                                                                                                aaCATTTCCATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggttgaatcggctgaaacttttacgggtg                        <  1:2548331‑M2/151‑129 (MQ=255)

                                                                                                                                        cATTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggttgaatcggctgaaacttttacgggtgatacggct                >  1:933748‑M2/1‑15 (MQ=255)

                                                                                                                                        cATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGTTTCAGGATCAAACTGTGTACCGGAATTGttt                >  1:1519271/1‑151 (MQ=255)

                                                                                                                                         aTTTTAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggttgaatcggctgaaacttttacgggtgatacggctg               <  1:377636‑M2/151‑138 (MQ=255)

                                                                                                                                         aTTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGTTTCAGGATCAAACTGTGTACCGGAATTGtttt               >  1:198876/1‑151 (MQ=255)

                                                                                                                                          ttttAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAGGGCTTCCACTGTTTCAGGATCAAACTGTGTACCGGAATTGttttt              >  1:3195505/1‑151 (MQ=255)

                                                                                                                                           tttAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggttgaatcggctgaaacttttacgggtgatacggctgct             >  1:2888440‑M2/1‑12 (MQ=255)

                                                                                                                                             tAATATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggttgaatcggctgaaacttttacgggtgatacggctgctct           <  1:2557411‑M2/151‑142 (MQ=255)

                                                                                                                                              aaTATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggttgaatcggctgaaacttttacgggtgatacggctgctctt          >  1:492317‑M2/1‑9 (MQ=255)

                                                                                                                                              aaTATTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggttgaatcggctgaaacttttacgggtgatacggctgctctt          <  1:410046‑M2/151‑143 (MQ=255)

                                                                                                                                              aaTATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGTTTCAGGATCAAACTGTGTACCGGAATTGTTTTTCAAc          >  1:2031630/1‑151 (MQ=255)

                                                                                                                                               atatTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGTTTCAGGATCAAACTGTGTACCGGAATTGTTTTTCAACt         >  1:884044/1‑151 (MQ=255)

                                                                                                                                                 atTTCCattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggttgaatcggctgaaacttttacgggtgatacggctgctcttgaa       <  1:2870441‑M2/151‑146 (MQ=255)

                                                                                                                                                    tCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGTTTCAGGATCAAACTGTGTACCGGAATTGTTTTTCAACTCAGcc    >  1:1581626/1‑151 (MQ=255)

                                                                                                                                                     ccGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGTTTCAGGATCAAACTGTGTACCGGAATTGTTTTTCAACTCAGCCa   <  1:833457/151‑1 (MQ=255)

                                                                                                                                                      cattccttcctcctttatcaataactgtttagcattagtaatattatatcctacttgataattgtaagtcatcaatttttgaaagttttatgtgtaaaaaggttgaatcggctgaaacttttacgggtgatacggctgctcttgaaacctt  >  1:231129‑M2/1‑1 (MQ=255)

                                                                                                                                                      cGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGTTTCAGGATCAAACTGTGTACCGGAATTGTTTTTCAACTCAGCCAg  >  1:916516/1‑151 (MQ=255)

TTTTATATGTTAAAAAATTAACACTGCATCCTTCTACCATATTACCACAAAGTCCAATTAATAGAAAGCATTTATTGCAAAACCATAGTATATTTTATCCATAATGACCCATCTTAAAACATTTTTTCAACATTTCCATTTTAATATTTCCGGGAAAACAAATCAACCTTTTTTAAATTGCTTCATCAATGCTATGACTAATACTATGACTGTCACAGTCAGAATTATCAAAAGTGCTGAGAAAGGCTTCCACTGTTTCAGGATCAAACTGTGTACCGGAATTGTTTTTCAACTCAGCCAG  >  CP002416/2456287‑2456587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.