New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP002416 448224 =73 (0.500)77 (0.680) 62/234 1.7 52.0% intergenic (‑386/‑1103) Clo1313_0403/Clo1313_0405 lysyl‑tRNA synthetase/CheW protein
?CP002416 448695 = 85 (0.750)intergenic (‑857/‑632) Clo1313_0403/Clo1313_0405 lysyl‑tRNA synthetase/CheW protein

Only 100 of 199 total aligned reads displayed.

TACAAAATTTTTATAAATATTTTAAAAAAAAGATACATTATTTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCTAATTAACACAAAAATCCGGTGCTGG  >  CP002416/448546‑448844
                                                                                                                                                     |                                                                                                                                                     
caattaagtatggtataaagctccaaataatcaactaaatagtttgagctttttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaaa                                                                                                                                                      >  1:1946872‑M2/150‑151 (MQ=255)
 aCAAAATTTTTATAAATATTTTAAAAAAAAGATACATTATTTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTaaaaa                                                                                                                                                     >  1:2887700/1‑151 (MQ=255)
   ttaagtatggtataaagctccaaataatcaactaaatagtttgagctttttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGt                                                                                                                                                   >  1:3192068‑M2/147‑151 (MQ=255)
      agtatggtataaagctccaaataatcaactaaatagtttgagctttttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGa                                                                                                                                                <  1:1537351‑M2/8‑1 (MQ=255)
            ataAATATTTTAAAAAAAAGATACATTATTTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGAcc                                                                                                                                          <  1:1801486/151‑1 (MQ=255)
             taAATATTTTAAAAAAAAGATACATTATTTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCa                                                                                                                                         >  1:524041/1‑151 (MQ=255)
              ataaagctccaaataatcaactaaatagtttgagctttttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCat                                                                                                                                        <  1:268321‑M2/16‑1 (MQ=255)
              aaaTATTTTAAAAAAAAGATACATTATTTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCat                                                                                                                                        >  1:1957140/1‑151 (MQ=255)
               taaagctccaaataatcaactaaatagtttgagctttttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCata                                                                                                                                       >  1:2369025‑M2/135‑151 (MQ=255)
                atatTTTAAAAAAAAGATACATTATTTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCatat                                                                                                                                      >  1:1871950/1‑151 (MQ=255)
                atatTTTAAAAAAAAGATACATTATTTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCatat                                                                                                                                      >  1:1461197/1‑151 (MQ=255)
                  atTTTAAAAAAAAGATACATTATTTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATaa                                                                                                                                    <  1:307136/151‑1 (MQ=255)
                  agctccaaataatcaactaaatagtttgagctttttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATaa                                                                                                                                    >  1:461741‑M2/132‑151 (MQ=255)
                  agctccaaataatcaactaaatagtttgagctttttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATaa                                                                                                                                    <  1:1657754‑M2/20‑1 (MQ=255)
                     tccaaataatcaactaaatagtttgagctttttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATaaaaa                                                                                                                                 >  1:3167264‑M2/129‑151 (MQ=255)
                     tccaaataatcaactaaatagtttgagctttttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATaaaaa                                                                                                                                 >  1:2522207‑M2/129‑151 (MQ=255)
                        aaataatcaactaaatagtttgagctttttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAat                                                                                                                              <  1:28074‑M2/26‑1 (MQ=255)
                         aaaaaaGATACATTATTTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAata                                                                                                                             <  1:1979450/151‑1 (MQ=255)
                             aaGATACATTATTTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAAtatata                                                                                                                         <  1:748550/151‑1 (MQ=255)
                             aaGATACATTATTTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAAtatata                                                                                                                         <  1:765590/151‑1 (MQ=255)
                              aGATACATTATTTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATaa                                                                                                                        >  1:3361216/1‑151 (MQ=255)
                               caactaaatagtttgagctttttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAAt                                                                                                                       >  1:3290233‑M2/119‑151 (MQ=255)
                                 actaaatagtttgagctttttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTa                                                                                                                     >  1:1500548‑M2/117‑151 (MQ=255)
                                    aaatagtttgagctttttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTa                                                                                                                  <  1:1331085‑M2/38‑1 (MQ=255)
                                     ttattTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATTTAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTAc                                                                                                                 >  1:2024236/1‑151 (MQ=255)
                                     ttattTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTAc                                                                                                                 <  1:1417503/151‑1 (MQ=255)
                                     ttattTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTAc                                                                                                                 <  1:3382396/151‑1 (MQ=255)
                                      atagtttgagctttttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACt                                                                                                                <  1:2574897‑M2/40‑1 (MQ=255)
                                         tttttATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTAt                                                                                                             <  1:1906808/151‑1 (MQ=255)
                                          ttttATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATg                                                                                                            >  1:366648/1‑151 (MQ=255)
                                            ttATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTa                                                                                                          >  1:2965714/1‑151 (MQ=255)
                                               tataAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAAt                                                                                                       >  1:2213617/1‑151 (MQ=255)
                                                  aaaaaaTTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGa                                                                                                    <  1:1640467/151‑1 (MQ=255)
                                                   aaaaaTTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGaa                                                                                                   >  1:1264998/1‑151 (MQ=255)
                                                    ttatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATACAATTAGTACTTATGTAAATTGaaa                                                                                                  <  1:3431868‑M2/54‑1 (MQ=255)
                                                     tatttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAAt                                                                                                 <  1:1235217‑M2/55‑1 (MQ=255)
                                                     aaaTTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAAt                                                                                                 >  1:376485/1‑151 (MQ=255)
                                                      atttattttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAAtt                                                                                                <  1:392156‑M2/56‑1 (MQ=255)
                                                      aaTTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAAtt                                                                                                <  1:2275620/151‑1 (MQ=255)
                                                       tttattttataaaaaatgcaaaatatgcaggtaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTa                                                                                               >  1:2862387‑M2/95‑151 (MQ=255)
                                                         tAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTaaa                                                                                             <  1:910847/151‑1 (MQ=255)
                                                          attttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTaaaa                                                                                            <  1:2461523‑M2/60‑1 (MQ=255)
                                                          aaaaaaaaTGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTaaaa                                                                                            >  1:301541/1‑151 (MQ=255)
                                                          aaaaaaaaTGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTaaaa                                                                                            <  1:2499930/151‑1 (MQ=255)
                                                           ttttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAAt                                                                                           >  1:1429958‑M2/91‑151 (MQ=255)
                                                           aaaaaaaTGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAAt                                                                                           <  1:41295/151‑1 (MQ=255)
                                                            tttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAAtt                                                                                          <  1:2190309‑M2/62‑1 (MQ=255)
                                                             ttataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTg                                                                                         >  1:1749858‑M2/89‑151 (MQ=255)
                                                              aaaaTGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGt                                                                                        >  1:3143101/1‑151 (MQ=255)
                                                              aaaaTGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAA‑TATATAATTAGTACTTATGTAAATTGAAATTAAAATTGta                                                                                       <  1:616908/151‑1 (MQ=255)
                                                               ataaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGta                                                                                       >  1:2875962‑M2/87‑151 (MQ=255)
                                                                taaaaaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGtaa                                                                                      >  1:1302446‑M2/86‑151 (MQ=255)
                                                                 aTGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGtaat                                                                                     >  1:668004/1‑151 (MQ=255)
                                                                   gTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGAGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGtaataa                                                                                   >  1:2001857/1‑151 (MQ=255)
                                                                    tACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTaataat                                                                                  >  1:1814954/1‑151 (MQ=255)
                                                                    aaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTaataat                                                                                  <  1:2441159‑M2/70‑1 (MQ=255)
                                                                    aaatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTaataat                                                                                  <  1:1175705‑M2/70‑1 (MQ=255)
                                                                     aatgcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAAtt                                                                                 <  1:2715755‑M2/71‑1 (MQ=255)
                                                                      cTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTa                                                                                <  1:1216248/151‑1 (MQ=255)
                                                                        gcaaaatatgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGt                                                                              >  1:1855943‑M2/78‑151 (MQ=255)
                                                                                tgcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAAc                                                                      >  1:2939264‑M2/70‑151 (MQ=255)
                                                                                tGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAAGATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAAc                                                                      >  1:2763659/1‑151 (MQ=255)
                                                                                 gcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACa                                                                     <  1:421003‑M2/83‑1 (MQ=255)
                                                                                 gcaggaaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACa                                                                     <  1:814832‑M2/83‑1 (MQ=255)
                                                                                  aaTCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACat                                                                    >  1:1713800/1‑151 (MQ=255)
                                                                                  aaTCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACat                                                                    >  1:203746/1‑151 (MQ=255)
                                                                                    tCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAGAATTGTAATAATTAGTATCAAAACatat                                                                  <  1:3255875/151‑1 (MQ=255)
                                                                                      ttttGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATAttt                                                                >  1:787864/1‑151 (MQ=255)
                                                                                      aaaaataaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATAttt                                                                >  1:2648611‑M2/64‑151 (MQ=255)
                                                                                            aaatattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGa                                                          >  1:635320‑M2/58‑151 (MQ=255)
                                                                                             aatattgcgtcgaaggataattttaaagtaacaaaatgagcatattgatacattaaAAAGAGGAGGGACCATAAAAAAAAATATATAATTAGAACTTATGAAAATTGAAATTAAAATTGTAAAAATAAGGATCAAAACATATTTTTGCGaa                                                         >  1:2901465‑M2/57‑151 (MQ=255)
                                                                                              atattgcgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAg                                                        <  1:3239577‑M2/96‑1 (MQ=255)
                                                                                              ataAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAg                                                        <  1:2584292/151‑1 (MQ=255)
                                                                                               taAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGa                                                       <  1:1104147/151‑1 (MQ=255)
                                                                                                 aaGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGAcc                                                     >  1:369773/1‑151 (MQ=255)
                                                                                                    cgtcgaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCaaa                                                  >  1:1112589‑M2/50‑151 (MQ=255)
                                                                                                     cTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCaaaa                                                 >  1:2741744/1‑151 (MQ=255)
                                                                                                       ttCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACt                                               <  1:1388950/151‑1 (MQ=255)
                                                                                                        gaagtataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTg                                              >  1:3333118‑M2/46‑151 (MQ=255)
                                                                                                          aaTATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGAc                                            <  1:2058718/151‑1 (MQ=255)
                                                                                                             ataattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACaaa                                         >  1:2732684‑M2/41‑151 (MQ=255)
                                                                                                               aattttaaagtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGc                                       >  1:1365136‑M2/39‑151 (MQ=255)
                                                                                                                  aataaAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCa                                    >  1:2312354/1‑151 (MQ=255)
                                                                                                                        gtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGa                              >  1:975173‑M2/30‑151 (MQ=255)
                                                                                                                        gtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGa                              <  1:2231343‑M2/122‑1 (MQ=255)
                                                                                                                        gtaacaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGa                              >  1:103037‑M2/30‑151 (MQ=255)
                                                                                                                           acaaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCt                           <  1:3021781‑M2/125‑1 (MQ=255)
                                                                                                                            caaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCTa                          >  1:848810‑M2/26‑151 (MQ=255)
                                                                                                                             aaaatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCTaa                         >  1:1119551‑M2/25‑151 (MQ=255)
                                                                                                                               aatgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCTAAtt                       <  1:2541827‑M2/129‑1 (MQ=255)
                                                                                                                                atgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGAATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCTAATTa                      <  1:3318153‑M2/130‑1 (MQ=255)
                                                                                                                                 tgagcatattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCTAATTaa                     >  1:949673‑M2/21‑151 (MQ=255)
                                                                                                                                      atattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCTAATTAACACaa                >  1:1538290‑M2/16‑151 (MQ=255)
                                                                                                                                      atattgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCTAATTAACACaa                >  1:145805‑M2/16‑151 (MQ=255)
                                                                                                                                        attgttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCTAATTAACACaaaa              <  1:1618785‑M2/138‑1 (MQ=255)
                                                                                                                                            ttacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCTAATTAACACAAAAATcc          >  1:1051626‑M2/10‑151 (MQ=255)
                                                                                                                                             tacattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATCTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTGTGCGAAGACCAAAACTGACAAAGCTCAAGTCGACCTAATTAACACAAAAATCCg         >  1:339199‑M2/9‑151 (MQ=255)
                                                                                                                                              acattaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAATATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCTAATTAACACAAAAATCCgg        <  1:3399585‑M2/144‑1 (MQ=255)
                                                                                                                                                 ttaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCTAATTAACACAAAAATCCGGTGc     >  1:1046023‑M2/5‑151 (MQ=255)
                                                                                                                                                 ttaaAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGAAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCTAATTAACACAAAAATCCGGTGc     >  1:1016543‑M2/5‑151 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TACAAAATTTTTATAAATATTTTAAAAAAAAGATACATTATTTTTTATATAAAAAATTAAAAAAAATGTACTATTAGTGTTGAATCTTTTGAATATAAAGGCTTTCAATATATTAATAAAGTAACAAAATGAGCATATTGTTACATTAAAAAGTGGAAGGACCATATAAAAAAATATATAATTAGTACTTATGTAAATTGAAATTAAAATTGTAATAATTAGTATCAAAACATATTTTTGCGAAGACCAAAACTGACAAAGCTCAAGTTGACCTAATTAACACAAAAATCCGGTGCTGG  >  CP002416/448546‑448844

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.