New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP002416 = 357985 (0.030)184 (1.300) 123/292 0.1 97.4% intergenic (+67/‑191) Clo1313_0033/Clo1313_0034 Peptidoglycan‑binding lysin domain/4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol kinase
?CP002416 = 3041052 NA (NA)intergenic (‑126/+95) Clo1313_2585/Clo1313_2586 transposase IS200‑family protein/copper amine oxidase‑like domain‑containing protein

Only 100 of 164 total aligned reads displayed.

CTAGCATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCAACCGTTGCATTCA  >  CP002416/3040910‑3041202
                                                                                                                                              |                                                                                                                                                      
cTAGCATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTAGGCGAACCTAAATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATaaa                                                                                                                                                <  1:285641/151‑1 (MQ=2)
 tAGCATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATaaag                                                                                                                                               >  1:2533563/1‑151 (MQ=31)
   gCATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATaaagaa                                                                                                                                             <  1:1253111/151‑1 (MQ=32)
     aTTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATaaagaaag                                                                                                                                           >  1:2577227/1‑151 (MQ=33)
         tCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGata                                                                                                                                       >  1:1016833/1‑151 (MQ=37)
          cACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGatat                                                                                                                                      <  1:3178667/151‑1 (MQ=38)
            cGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATcc                                                                                                                                    >  1:2035428/1‑151 (MQ=39)
             gCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCg                                                                                                                                   <  1:1060257/151‑1 (MQ=40)
              cATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGc                                                                                                                                  >  1:137132/1‑151 (MQ=40)
                 cGTGATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCt                                                                                                                               >  1:1349476/1‑151 (MQ=255)
                 cGTGATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCt                                                                                                                               <  1:1485787/151‑1 (MQ=255)
                  gTGATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCta                                                                                                                              <  1:1562433/151‑1 (MQ=255)
                   tGATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCtat                                                                                                                             <  1:3273833/151‑1 (MQ=255)
                    gATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCtata                                                                                                                            <  1:3130851/151‑1 (MQ=255)
                      tACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATaaa                                                                                                                          <  1:1687439/151‑1 (MQ=255)
                        cctcctTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACg                                                                                                                        >  1:966286/1‑151 (MQ=255)
                         ctcctTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACgg                                                                                                                       <  1:610504/151‑1 (MQ=255)
                         ctcctTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACgg                                                                                                                       <  1:580027/151‑1 (MQ=255)
                           cctTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGtt                                                                                                                     >  1:84999/1‑151 (MQ=255)
                            ctTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTa                                                                                                                    >  1:2919369/1‑151 (MQ=255)
                            ctTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTa                                                                                                                    <  1:551715/151‑1 (MQ=255)
                             tttGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTAt                                                                                                                   <  1:2497414/151‑1 (MQ=255)
                               tGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATcc                                                                                                                 <  1:2449185/151‑1 (MQ=255)
                                  ttttAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCttt                                                                                                              <  1:450090/151‑1 (MQ=255)
                                   tttAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTtc                                                                                                             >  1:3001408/1‑151 (MQ=255)
                                       aTGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCtt                                                                                                         <  1:2936587/151‑1 (MQ=255)
                                         gTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCg                                                                                                       <  1:309858/151‑1 (MQ=255)
                                          tAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCgg                                                                                                      <  1:3034234/151‑1 (MQ=255)
                                           aGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGa                                                                                                     <  1:2875207/151‑1 (MQ=255)
                                             ttGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATa                                                                                                   <  1:303625/151‑1 (MQ=255)
                                             ttGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATa                                                                                                   <  1:2381942/151‑1 (MQ=255)
                                              tGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATaa                                                                                                  >  1:2340318/1‑151 (MQ=255)
                                               ggCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATaaa                                                                                                 <  1:2276235/151‑1 (MQ=255)
                                                    aCCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGc                                                                                            <  1:2714639/151‑1 (MQ=255)
                                                      cTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCTTTTTCCTTCGAATAAAAAAGctc                                                                                          >  1:2580018/1‑150 (MQ=18)
                                                      cTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGctt                                                                                          >  1:2269944/1‑151 (MQ=255)
                                                      cTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGctt                                                                                          >  1:2921876/1‑151 (MQ=255)
                                                      cTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGctt                                                                                          <  1:3186068/151‑1 (MQ=255)
                                                      cTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGctt                                                                                          <  1:927116/151‑1 (MQ=255)
                                                      cTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGctt                                                                                          <  1:665151/151‑1 (MQ=255)
                                                       tACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGcttc                                                                                         >  1:3337037/1‑151 (MQ=255)
                                                          attattGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTa                                                                                      <  1:538056/151‑1 (MQ=255)
                                                           ttattGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTaa                                                                                     <  1:786531/151‑1 (MQ=255)
                                                            tattGTAACAAAGGAGGTTACTTTTTTCTACTCATATACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTaaa                                                                                    >  1:2618973/1‑151 (MQ=255)
                                                                 tAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACttt                                                                               <  1:1314287/151‑1 (MQ=255)
                                                                 tAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACttt                                                                               <  1:2183449/151‑1 (MQ=255)
                                                                  aaCAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTa                                                                              <  1:2967369/151‑1 (MQ=255)
                                                                   aCAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTAt                                                                             >  1:2789342/1‑151 (MQ=255)
                                                                    cAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTAtt                                                                            <  1:1256044/151‑1 (MQ=255)
                                                                     aaaGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTAttt                                                                           >  1:410893/1‑151 (MQ=255)
                                                                     aaaGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTAttt                                                                           >  1:2222097/1‑151 (MQ=255)
                                                                      aaGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTAtttt                                                                          <  1:3113004/151‑1 (MQ=255)
                                                                      aaGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTAtttt                                                                          <  1:219285/151‑1 (MQ=255)
                                                                      aaGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTAtttt                                                                          <  1:837177/151‑1 (MQ=255)
                                                                       aggaggTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGCTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTa                                                                         >  1:2844053/1‑151 (MQ=255)
                                                                        ggaggTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTAc                                                                        >  1:2121634/1‑151 (MQ=255)
                                                                         gaggTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACg                                                                       >  1:1791852/1‑151 (MQ=255)
                                                                              tACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCa                                                                  >  1:418436/1‑151 (MQ=255)
                                                                                  tttttCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTa                                                              <  1:1842149/151‑1 (MQ=255)
                                                                                    tttCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAg                                                            >  1:1864705/1‑151 (MQ=255)
                                                                                    tttCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAg                                                            <  1:486033/151‑1 (MQ=255)
                                                                                     ttCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGt                                                           <  1:271195/151‑1 (MQ=255)
                                                                                       cTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTAt                                                         <  1:76144/151‑1 (MQ=255)
                                                                                       cTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTAt                                                         <  1:1208693/151‑1 (MQ=255)
                                                                                        tACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTAtt                                                        <  1:53312/151‑1 (MQ=255)
                                                                                          cTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATtaa                                                      >  1:3346148/1‑151 (MQ=255)
                                                                                           tCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATtaat                                                     <  1:947745/151‑1 (MQ=255)
                                                                                           tCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATtaat                                                     >  1:3313759/1‑151 (MQ=255)
                                                                                              tAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATaaa                                                  <  1:426908/151‑1 (MQ=255)
                                                                                              tAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATaaa                                                  >  1:1056275/1‑151 (MQ=255)
                                                                                               aGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATaaaa                                                 <  1:3263470/151‑1 (MQ=255)
                                                                                                  cacTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAatat                                              <  1:2551384/151‑1 (MQ=255)
                                                                                                   acTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATg                                             >  1:32183/1‑151 (MQ=255)
                                                                                                         tctTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACt                                       <  1:85399/151‑1 (MQ=255)
                                                                                                         tctTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACt                                       <  1:2307407/151‑1 (MQ=255)
                                                                                                         tctTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACt                                       <  1:677905/151‑1 (MQ=255)
                                                                                                             tAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCt                                   >  1:1708701/1‑151 (MQ=255)
                                                                                                             tAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCt                                   >  1:639322/1‑151 (MQ=255)
                                                                                                             tAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCt                                   <  1:524864/151‑1 (MQ=255)
                                                                                                               gAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGa                                 >  1:1765608/1‑151 (MQ=255)
                                                                                                               gAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGa                                 <  1:2738642/151‑1 (MQ=255)
                                                                                                                aaCCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAg                                >  1:1050589/1‑151 (MQ=255)
                                                                                                                 aCCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGc                               <  1:1167702/151‑1 (MQ=255)
                                                                                                                  ccACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCt                              <  1:280518/151‑1 (MQ=255)
                                                                                                                             gCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCa                   <  1:3465690/151‑1 (MQ=255)
                                                                                                                               cAGTGGATTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCAtt                 >  1:2962716/1‑151 (MQ=255)
                                                                                                                                  tGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCaa              >  1:1120555/1‑151 (MQ=255)
                                                                                                                                    gTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCAAcc            <  1:274731/151‑1 (MQ=255)
                                                                                                                                    gTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCAAcc            <  1:1153519/151‑1 (MQ=255)
                                                                                                                                    gTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGAATACTATCTGAGCTTCTCCGTCCCATTCaatc            >  1:1963627/1‑149 (MQ=255)
                                                                                                                                     ttttCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCAACCg           >  1:1896223/1‑151 (MQ=255)
                                                                                                                                     ttttCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCAACCg           >  1:472903/1‑151 (MQ=255)
                                                                                                                                        tCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCAACCGTTg        >  1:2540404/1‑151 (MQ=255)
                                                                                                                                        tCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCAACCGTTg        >  1:727008/1‑151 (MQ=255)
                                                                                                                                        tCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCAACCGTTg        >  1:1514497/1‑151 (MQ=255)
                                                                                                                                         cTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCAACCGTTGc       >  1:666141/1‑151 (MQ=255)
                                                                                                                                           ttAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCAACCGTTGCAt     >  1:2804361/1‑151 (MQ=255)
                                                                                                                                            tAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCAACCGTTGCAtt    <  1:2227523/151‑1 (MQ=255)
                                                                                                                                             aaaCAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCAACCGTTGCATTc   <  1:2473823/151‑1 (MQ=255)
                                                                                                                                              aaCAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGCATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCAACCGTTGCATTCa  <  1:2774452/151‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                                      
CTAGCATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCGAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAATAAAGAAAGGATATCCGCCCTATAAACGGTTATCCTTTCTCTTCGGATAAAAAAGCTTCTTAAAACTTTATTTTACGCATCAATTAAGTATTAATAAAATATGTATACTATCTGAGCTTCTCCGTCCCATTCAACCGTTGCATTCA  >  CP002416/3040910‑3041202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.