New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP002416 1438371 =0 (0.000)182 (1.270) 124/296 0.1 100% intergenic (+52/‑89) Clo1313_1210/Clo1313_1211 translation elongation factor Ts/uridylate kinase
?CP002416 = 1618385 NA (NA)intergenic (+125/‑148) Clo1313_1375/Clo1313_1376 transposase IS200‑family protein/stage III sporulation protein AA

Only 100 of 185 total aligned reads displayed.

TTCCCCCGCCAAGGCCTCTCCGCTTATTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP002416/1438522‑1438371
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaTCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTACTC  <  CP002416/1618385‑1618238
                                                                                                                                                                                                                                                                                                            
TTCCCCCGCCAAGGCCTCTCCGCTTATTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTA                                                                                                                                                       <  1:2292250/151‑1
 TCCCCCGCCAAGGCCTCTCCGCTTATTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAA                                                                                                                                                      >  1:1241319/1‑151
       GCCAAGGCCTCTCCGCTTATTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAA                                                                                                                                                <  1:2258845/151‑1
            GGCCTCTCCGCTTATTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACC                                                                                                                                           >  1:1943142/1‑151
              CCTCTCCGCTTATTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGG                                                                                                                                         >  1:1126472/1‑151
              CCTCTCCGCTTATTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGG                                                                                                                                         >  1:1814789/1‑151
                TCTCCGCTTATTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCT                                                                                                                                       >  1:3355850/1‑151
                TCTCCGCTTATTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCT                                                                                                                                       <  1:889035/151‑1
                TCTCCGCTTATTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCT                                                                                                                                       >  1:1526623/1‑151
                     GCTTATTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCC                                                                                                                                  >  1:201917/1‑151
                       TTATTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGG                                                                                                                                <  1:2712188/151‑1
                        TATTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGT                                                                                                                               >  1:1567271/1‑151
                          TTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGG                                                                                                                             >  1:2763201/1‑151
                            TTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTT                                                                                                                           <  1:3144593/151‑1
                             TCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTT                                                                                                                          <  1:510461/151‑1
                                ACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCT                                                                                                                       >  1:1974896/1‑151
                                 CATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTC                                                                                                                      <  1:2277677/151‑1
                                  ATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCT                                                                                                                     <  1:2622885/151‑1
                                          TTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTAT                                                                                                             >  1:2378370/1‑151
                                          TTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTAT                                                                                                             >  1:212749/1‑151
                                           TTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATA                                                                                                            <  1:1727300/151‑1
                                              TACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGG                                                                                                         >  1:356708/1‑151
                                               ACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGG                                                                                                        >  1:1579883/1‑151
                                               ACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGG                                                                                                        <  1:586742/151‑1
                                               ACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGG                                                                                                        <  1:1290547/151‑1
                                                CTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGC                                                                                                       >  1:1971684/1‑151
                                                 TTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCA                                                                                                      >  1:4006/1‑151
                                                  TCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCAT                                                                                                     >  1:830638/1‑151
                                                   CGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATG                                                                                                    >  1:2720004/1‑151
                                                    GGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGG                                                                                                   >  1:1890532/1‑151
                                                     GTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGT                                                                                                  <  1:452911/151‑1
                                                     GTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGT                                                                                                  >  1:1538116/1‑151
                                                      TTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTC                                                                                                 <  1:3112910/151‑1
                                                       TTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCC                                                                                                >  1:1095868/1‑151
                                                              TTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGC                                                                                         <  1:1127355/151‑1
                                                                AAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGT                                                                                       <  1:437398/151‑1
                                                                    ATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTA                                                                                   <  1:543175/151‑1
                                                                          CTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGC                                                                             >  1:2610725/1‑151
                                                                            CCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGT                                                                           <  1:1005699/151‑1
                                                                             CGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTT                                                                          >  1:2938603/1‑151
                                                                             CGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTT                                                                          >  1:2535579/1‑151
                                                                             CGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTT                                                                          <  1:2563196/151‑1
                                                                              GCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTG                                                                         >  1:2589989/1‑151
                                                                               CTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGA                                                                        >  1:1845411/1‑151
                                                                                 CCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAAT                                                                      >  1:288535/1‑151
                                                                                   TAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGG                                                                    <  1:1615663/151‑1
                                                                                     AATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTT                                                                  <  1:577897/151‑1
                                                                                      ATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTC                                                                 <  1:670394/151‑1
                                                                                        GTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGC                                                               >  1:1765190/1‑151
                                                                                            TTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAAC                                                           >  1:2822717/1‑151
                                                                                              CTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCG                                                         >  1:2188768/1‑151
                                                                                                  CATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATA                                                     >  1:367025/1‑151
                                                                                                     ATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTC                                                  >  1:2033192/1‑151
                                                                                                        AACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTC                                               >  1:805155/1‑151
                                                                                                        AACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTC                                               >  1:283197/1‑151
                                                                                                         ACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCT                                              >  1:2982308/1‑151
                                                                                                         ACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCT                                              <  1:1867852/151‑1
                                                                                                         ACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCT                                              >  1:2080498/1‑151
                                                                                                             TATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAG                                          <  1:1958982/151‑1
                                                                                                             TATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAG                                          >  1:3021503/1‑151
                                                                                                                AATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTTAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCA                                       <  1:1679116/151‑1
                                                                                                                  TTGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACC                                     <  1:809233/151‑1
                                                                                                                   TGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCA                                    >  1:313083/1‑151
                                                                                                                   TGGAAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCA                                    <  1:2270558/151‑1
                                                                                                                      AAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTA                                 >  1:2547201/1‑151
                                                                                                                      AAACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTA                                 <  1:3459273/151‑1
                                                                                                                       AACAAATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAA                                >  1:2248883/1‑151
                                                                                                                           AATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTG                            >  1:1791034/1‑151
                                                                                                                            ATTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGG                           <  1:939179/151‑1
                                                                                                                             TTTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGT                          >  1:2505169/1‑151
                                                                                                                              TTTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTT                         <  1:96790/151‑1
                                                                                                                               TTATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTT                        <  1:1020618/151‑1
                                                                                                                                TATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTT                       <  1:862300/151‑1
                                                                                                                                 ATTAAAACAACAATAATCCCTAATCATAACCGCCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTA                      <  1:1241318/151‑1
                                                                                                                                 ATTAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTA                      >  1:2449464/1‑151
                                                                                                                                   TAAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATT                    >  1:3205977/1‑151
                                                                                                                                    AAAACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTT                   <  1:781504/151‑1
                                                                                                                                      AACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTT                 <  1:3222549/151‑1
                                                                                                                                      AACAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTT                 <  1:642247/151‑1
                                                                                                                                        CAACAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTG               >  1:68432/1‑151
                                                                                                                                           ccgcatcatgTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTT            <  1:1714934/141‑1
                                                                                                                                           CAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTT            <  1:135098/151‑1
                                                                                                                                           CAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTT            <  1:818149/151‑1
                                                                                                                                           CAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTT            <  1:2401407/151‑1
                                                                                                                                           CAATAATCCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTT            >  1:3285233/1‑151
                                                                                                                                               atcatgTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTAT        <  1:410783/145‑1
                                                                                                                                               atcatgTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTAT        <  1:2345005/145‑1
                                                                                                                                               atcatgTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTAT        <  1:3087623/145‑1
                                                                                                                                                tcatgTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATT       <  1:1009552/146‑1
                                                                                                                                                  atgTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTA     <  1:2542040/148‑1
                                                                                                                                                  atgTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTA     <  1:623815/148‑1
                                                                                                                                                  CCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTA     <  1:3355851/151‑1
                                                                                                                                                  CCCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTA     >  1:1467262/1‑151
                                                                                                                                                   CCTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTAC    <  1:2941458/151‑1
                                                                                                                                                    CTAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTACT   >  1:2171319/1‑151
                                                                                                                                                     TAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTACTC  >  1:3291975/1‑151
                                                                                                                                                     TAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTACTC  >  1:2855920/1‑151
                                                                                                                                                     TAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTACTC  >  1:3148004/1‑151
                                                                                                                                                     TAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTACTC  >  1:3426239/1‑151
                                                                                                                                                     TAATCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGAGGTTTTATTTTTTGCTTTTATTTACTC  >  1:2400152/1‑151
                                                                                                                                                                                                                                                                                                            
TTCCCCCGCCAAGGCCTCTCCGCTTATTTTCAACATAATTCTTTTATACTTCGGTTTCTGCATTAAAGATAATCCTCCGCTCCTAAATGTTATTCTAACATATAAACATTATAATTGGAAACAAATTTTATTAAAACAACAATAATCCCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP002416/1438522‑1438371
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaTCATAACCACCGGCTCAGCCGGTGGTTTGCTCTAGCCCTATAAGGGCATGGTCCTTGCAGCGTCTTAAGACGCGTTGAATGGTTCGCCAACCGCATATTCTTCTCAAGCCACCACTAAAGTGGTTTTATTTTTTGCTTTTATTTACTC  <  CP002416/1618385‑1618238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.