| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP002416 | = 711297 | 99 (0.680) | 15 (0.110) | 8/290 | 17.9 | 14.4% | coding (2474/4848 nt) | Clo1313_0628 | cellulosome anchoring protein cohesin region |
| ? | CP002416 | 711739 = | 83 (0.590) | coding (2916/4848 nt) | Clo1313_0628 | cellulosome anchoring protein cohesin region | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GACGAACCAATACCAACGGATACACCGTCAGACGAACCGACACCATCAGATGAACCGACACCGTCTGATGAGCCAACACCATCGGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGACGAACCGACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP002416/711143‑711297‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaccGTCAGACGAGCCAACGCCATCTGACGAACCGACACCGTCTGATGAGCCAACACCATCTGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGATGAACCGACACCGTCAGACGAGCCAACGCCA > CP002416/711739‑711886 GACGAACCAATACCAACGGATACACCGTCAGACGAACCGACACCATCAGATGAACCGACACCGTCTGATGAGCCAACACCATCGGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGACGAACCGA > 1:3333716/1‑151 GAACCAATACCAACGGATACACCGTCAGACGAACCGACACCATCAGATGAACCGACACCGTCTGATGAGCCAACACCATCGGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGACGAACCGACAC > 1:149403/1‑151 GAACCAATACCAACGGATACACCGTCAGACGAACCGACACCATCAGATGAACCGACACCGTCTGATGAGCCAACACCATCGGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGACGAACCGACAC > 1:2809981/1‑151 AATACCAACGGATACACCGTCAGACGAACCGACACCATCAGATGAACCGACACCGTCTGATGAGCCAACACCATCGGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGACGAACCGACACCGTCA > 1:2232179/1‑151 agCGGATACACCGTCAGACGAGCCGACGCCATCAGATGAACCAACACCGTCTGATGAGCCAACACCATCGGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGATGAACCGACACCGTCAGACGAG < 1:2232178/149‑1 CATCGGATGACCCGACTCCATCAGAGGCCCATCAGGGGCCGATACCGGCGGACACACCAACAGACGAACCGACACCGTCAGACGAGCCAACGCCATCTGACGAACCGACACCGTCTGATGAGCCAACACCATCTGATGAACCGACTCCGTC < 1:2070501/151‑1 AACCGACTCCGTCAGAGGCACCTGAGGAGCCGATACCGACGGATACGCCACCAGACGAACCGACACCGTCAGACGAGCCAACGCCATCTGACGAACCAACACCGTCTGATGAGCCAACACCATCTGATGAACCGACTCCGTCAGAGACACC < 1:2592484/151‑1 ACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGACGAACCGACACCGTCAGACGAGCCAACGCCATCTGACGAACCAACACCGCCTGATGAGCCAACACCATCTGATGAACCGACCCCGTCAGAGACACCT > 1:688485/1‑151 CCGTCAGAGACGCCTGGGGGGCCGATACCGACGCATACACCATCAGACGAACCGACACCGTCAGCCGAGCCAACGCCACCTGACGAACCCGCCCCGTCTGATGAGCCAACGCCATCTGATGAACCGACTCCGTCAGAGACACCTGAGGAGC < 1:2438159/151‑1 gtcaacgccagcaGAGGAGCCGATACCGGCGCATACGCCATCAGGCGAACCAGCACCGTCAGACGAGCCAACGCCATCTGACGAACCGACACCGTCTGATGAGCCAACACCATCTGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCG < 1:820628/138‑1 agagaacccggcgggGCCGATACCGACGGATACACCACCAGACGAACCGACGCCGTCAGACGAGCCAACGCCATCTGACGAACCGACACCGTCTGATGAGCCAACACCATCTGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATA < 1:1194105/136‑1 GCCGACACCGACGGATACACCATCAGACGAACCGCCACCGACAGACGAGCCAACGCCAGCTGACGACCCGACTCCGTCTGACGAGCCAACGCCATCTGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCA < 1:435877/151‑1 gCGGATACACCATCAGAGCAACCGCCGCGGTCAGCCGAGCCACCGCCATCGGACGACCCCCCACCGTCTGATGAGCCAACACCATCTGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGATGAAC < 1:747982/150‑1 cTACACCATCAGACGAACCGACACCGTCAGACGAGCCAACGCCATCTGACGAACCAACACCGTCTGATGAGCCAACACCATCTGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGATGAACCGAC < 1:386581/150‑1 CACCATCAGACGAACCGACACCGTCAGACGAGCCAACGCCATCTGATGAACCGACGCCGTCTGATGAGCCAACCCCACCTGACGAACCGACTCCGCCAGAGACCCCTGAGGAGCCGATACCGACGGATACACCATCAGATGAACCGACACC < 1:291576/151‑1 CACCATCAGACGAACCGACACCGTCAGACGAGCCAACGCCATCTGACGAACCGACACCGTCTGATGAGCCAACACCATCTGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGATGAACCGACACC < 1:676268/151‑1 agacacACCGACTCCATCAGACGAGCCAACGCCATCTGACGAACCAGCTCCGTCTGATGAGCCAACACCATCTGATGAACCGACTCCGTCAGAGACCCCGGAGGAGCCGATACCCACGGATACACCATCAGATGAACCGACACCGTCAGAC < 1:1862890/145‑1 GAACCGACACCGTCAGACGAGCCAACGCCATCTGACGAACCGACACCGTCTGATGAGCCAACACCATCTGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGATGAACCGACACCGTCAGACGAGC > 1:2772755/1‑151 ACACCGTCAGACGAGCCAACGCCATCTGACGAACCGACACCGTCTGATGAGCCAACACCATCTGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGATGAACCGACACCGTCAGACGAGCCAACtc > 1:2692049/1‑149 CACCGTCAGACGAGCCAACGCCATCTGACGAACCGACACCGTCTGATGAGCCACCACCATCTGATGAACCGACTCCGTCTGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGATGAACCGACACCGTCAGACGAGCCAACGCC < 1:981582/151‑1 ACCGTCAGACGAGCCAACGCCATCTGACGAACCGACACCGTCTGATGAGCCAACACCATCTGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGGAGAACAGACACCGCCAGAAGAGCaagaacca > 1:2050905/1‑143 GACGAACCAATACCAACGGATACACCGTCAGACGAACCGACACCATCAGATGAACCGACACCGTCTGATGAGCCAACACCATCGGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGACGAACCGACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP002416/711143‑711297‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaccGTCAGACGAGCCAACGCCATCTGACGAACCGACACCGTCTGATGAGCCAACACCATCTGATGAACCGACTCCGTCAGAGACACCTGAGGAGCCGATACCGACGGATACACCATCAGATGAACCGACACCGTCAGACGAGCCAACGCCA > CP002416/711739‑711886 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |