New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP002416	103671 =	107 (0.730)	4 (0.030) +GCTCGGTTCCGGCTCCGGCGTCGGTGTC	4/244	18.8	4.4%	coding (1900/3180 nt)	Clo1313_0090	S‑layer domain‑containing protein
	?	CP002416	= 103810	108 (0.740)					coding (2039/3180 nt)	Clo1313_0090	S‑layer domain‑containing protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGTTCTGGTTCCGGTGTCGGCGTCGATGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP002416/103702‑103671 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGCTCGGTTCCGGCTCCGGCGTCGGTGTCGGGCTCGGCTCCGGTTCCGGTGTCGGCGTCGATGTCGGCTCCGGTTCTGGTTCCGGTGTCGGCGTCGATGTCGGCTCCGGTTCTGGTTCCGGTGTCGGCGTCGATGTCGGCTCCGGTT  <  CP002416/103810‑103663                                 ||||||||||||||||||||||||||||                                                                                                                                                     GGTTCTGGTGCCGGTGTCGGCGTCGATGTCGGGCTCGGTTCCGGCTCCGGCGTCGGTGTCGGGCTCGGTTCCGGCTCCGGCGTCGGTGTCGGGCTCGGCTCCGGTTCCGGTGTCGGCGTCGATGTCGGCTCCGGTTCTGGTTCCGGTGTCG                                                           <  1:2562890/151‑1     cgggtgCCGGTGTCGGGGTCGAGGTCGGGCTCGGTGCCGGGGCCGGCGTCGGTGTCGGGCTCGGTTCCGGCTGCGGCGTCGGTGTCGGGCTCGGCTCCGGTTCCGGTGTCGGCGTCGATGTCGGCTCCGGTTCTGGTTCCGGTGTCGGCGT                                                       <  1:2122383/145‑1      TGGTTCCGGTGTCGGCGTCGGTGTCGGGCTCGGTTCCGGCTCCGGTGTCGGTGTCGGGCTCGGTTCCGGCTCCGGCGTCGGTGTCGGGCTCGGCTCCGGTTCCGGTGTCGGCGTCGATGTCGGCTCCGGTTCTGGTTCCGGTGTCGGCGTC                                                      <  1:1982587/151‑1          accggcgtgGGCGTCGGTGTTGGGCCCGGTTCCGGCGTGGGCGTCGGTGTCGGGCTCGGTTCCGGCTCCGGCGTCGGTGTCGGGCTCGGCTCCGGTTCCGGTGTCGGCGTCGATGTCGGCTCCGGTTCTGGTTCCGGTGTCGGCGTCGATG                                                  <  1:1605657/142‑1                                      GTTCCGGCTCCGGCGTCGGTGTCGGGCTCGGGTCCGGCTCCGGCGTCGGTGTCGGGCTCGGGTCCGGTTCCGGTGTCGGCGTCGGTGTCGGGTCCGGTTCTGGTTCCGGTGTCGGCGTCGATGTCGGCTCCGGTTCTGGTTCCGGTGTCGG                      <  1:766480/151‑1                                      GTTCCGGCGCCGGCGTCGGTGTCGGGCTCGGGGCCGGTTCCGGCGTCGGTGTCGGGCTCGGCGCCGGTTCCGGTGTCGGCGTCGGTGTCGGGTCCGGTTCTGGTTCCGGTGTCGGCGTCGATGTCGGCTCCGGTTCTGGTTCCGGTGTCGG                      <  1:1926792/151‑1                                                          GTCGGGGTCGGTTCCGGTGCCGGCGTCGGGGTCGGGGTCGGTTCCGGTTCCGGTGTCGGCGTCGGTGTCGGGGTCGGTTCTGGTTCCGGTGTCGGCGTCGATGTCGGGTCCGGTTCTGGTTCCGGTGTCGGCGTCGATGTCGGCTCCGGTT  <  1:156392/151‑1                                 ||||||||||||||||||||||||||||                                                                                                                                                     GGTTCTGGTTCCGGTGTCGGCGTCGATGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP002416/103702‑103671 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGCTCGGTTCCGGCTCCGGCGTCGGTGTCGGGCTCGGCTCCGGTTCCGGTGTCGGCGTCGATGTCGGCTCCGGTTCTGGTTCCGGTGTCGGCGTCGATGTCGGCTCCGGTTCTGGTTCCGGTGTCGGCGTCGATGTCGGCTCCGGTT  <  CP002416/103810‑103663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.