BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP002416	2,005,747	+A	intergenic (‑132/+47)	Clo1313_1710 ← / ← Clo1313_R0045	transposase IS200‑family protein/tRNA‑Leu

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP002416	2,005,747	1	.	A	100.0%	509.4 / NA	132	intergenic (‑132/+47)	Clo1313_1710/Clo1313_R0045	transposase IS200‑family protein/tRNA‑Leu
Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (66/66); total (66/66)

Only 100 of 148 total aligned reads displayed.

ACTAGCATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAA‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTATTCATCAATC  >  CP002416/2005598‑2005896

aCTAGCATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACaaaaa                                                                                                                                                       >  1:1334398/1‑150 (MQ=14)

 cTAGCATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACaaaaat                                                                                                                                                      <  1:1935898/151‑3 (MQ=14)

  tAGCATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACaaaaata                                                                                                                                                     >  1:11547/1‑148 (MQ=14)

  tAGCATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACaaaaata                                                                                                                                                     <  1:46138/151‑4 (MQ=14)

   aGCATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACaaaaagaa                                                                                                                                                    <  1:1693344/151‑5 (MQ=11)

    gCATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACaaaaataaa                                                                                                                                                   <  1:723105/151‑6 (MQ=14)

     cATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATaaaa                                                                                                                                                  <  1:2767206/151‑1 (MQ=14)

     cATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATaaaa                                                                                                                                                  >  1:2207720/1‑151 (MQ=14)

     cATTATCACGCATCGTGATAC‑‑CCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATaaaaaa                                                                                                                                                <  1:606256/151‑1 (MQ=255)

      aTTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATaaaaa                                                                                                                                                 <  1:1634184/151‑1 (MQ=14)

       ttATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATaaaaaa                                                                                                                                                >  1:3327501/1‑151 (MQ=17)

        tATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATaaaaaaa                                                                                                                                               >  1:21358/1‑151 (MQ=18)

          tCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACa                                                                                                                                             >  1:1258545/1‑151 (MQ=21)

          tCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACa                                                                                                                                             <  1:2915015/151‑1 (MQ=21)

           cACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACaa                                                                                                                                            >  1:2971106/1‑151 (MQ=25)

             cGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAgg                                                                                                                                          >  1:2026317/1‑151 (MQ=255)

             cGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAgg                                                                                                                                          <  1:2344840/151‑1 (MQ=255)

              gCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGa                                                                                                                                         <  1:2378641/151‑1 (MQ=255)

              gCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGa                                                                                                                                         <  1:2188478/151‑1 (MQ=255)

                 tCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTc                                                                                                                                      <  1:3332938/151‑1 (MQ=255)

                 tCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTc                                                                                                                                      >  1:1346875/1‑151 (MQ=255)

                  cGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTcc                                                                                                                                     <  1:1573348/151‑1 (MQ=255)

                   gTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCa                                                                                                                                    <  1:1296582/151‑1 (MQ=255)

                    tGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCAt                                                                                                                                   >  1:670901/1‑151 (MQ=255)

                     gATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCAtt                                                                                                                                  <  1:2084647/151‑1 (MQ=255)

                      aTACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTa                                                                                                                                 >  1:3218999/1‑151 (MQ=255)

                       tACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTAt                                                                                                                                <  1:3230771/151‑1 (MQ=255)

                          ctcctTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGa                                                                                                                             <  1:2536852/151‑1 (MQ=255)

                          ctcctTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGa                                                                                                                             <  1:649218/151‑1 (MQ=255)

                          ctcctTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGa                                                                                                                             <  1:910042/151‑1 (MQ=255)

                           tcctTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGaa                                                                                                                            <  1:405248/151‑1 (MQ=255)

                            cctTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGaaa                                                                                                                           >  1:450521/1‑151 (MQ=255)

                                 gTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCtt                                                                                                                      <  1:396028/151‑1 (MQ=255)

                                    tttAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGt                                                                                                                   <  1:969315/151‑1 (MQ=255)

                                     ttAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGtt                                                                                                                  >  1:2930398/1‑151 (MQ=255)

                                      tAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGttt                                                                                                                 >  1:3084812/1‑151 (MQ=255)

                                      tAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGttt                                                                                                                 <  1:3456872/151‑1 (MQ=255)

                                      tAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGttt                                                                                                                 <  1:575824/151‑1 (MQ=255)

                                        aTGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCt                                                                                                               >  1:3444448/1‑151 (MQ=255)

                                         tGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCtt                                                                                                              <  1:2257286/151‑1 (MQ=255)

                                          gTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCttt                                                                                                             >  1:3308069/1‑151 (MQ=255)

                                          gTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCttt                                                                                                             <  1:1142190/151‑1 (MQ=255)

                                          gTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCttt                                                                                                             <  1:167380/151‑1 (MQ=255)

                                           tAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCtttt                                                                                                            >  1:1828045/1‑151 (MQ=255)

                                           tAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCtttt                                                                                                            <  1:2666718/151‑1 (MQ=255)

                                                  cAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGt                                                                                                     <  1:1992761/151‑1 (MQ=255)

                                                  cAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGt                                                                                                     <  1:2281871/151‑1 (MQ=255)

                                                   aaaCCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTg                                                                                                    >  1:2392923/1‑151 (MQ=255)

                                                   aaaCCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTg                                                                                                    >  1:206759/1‑151 (MQ=255)

                                                     aCCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGcc                                                                                                  >  1:1936554/1‑151 (MQ=255)

                                                      ccTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCg                                                                                                 >  1:2143666/1‑151 (MQ=255)

                                                             tattGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCg                                                                                          <  1:2681486/151‑1 (MQ=255)

                                                              attGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCgg                                                                                         <  1:3403035/151‑1 (MQ=255)

                                                                tGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGAt                                                                                       <  1:490697/151‑1 (MQ=255)

                                                                tGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGAt                                                                                       >  1:2586495/1‑151 (MQ=255)

                                                                 gTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGAtt                                                                                      <  1:3235268/151‑1 (MQ=255)

                                                                      aaaGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAAc                                                                                 >  1:1128461/1‑151 (MQ=255)

                                                                       aaGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAAcc                                                                                <  1:3457513/151‑1 (MQ=255)

                                                                       aaGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAAcc                                                                                >  1:2331927/1‑151 (MQ=255)

                                                                       aaGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAAcc                                                                                >  1:2402931/1‑151 (MQ=255)

                                                                       aaGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAAcc                                                                                <  1:561403/151‑1 (MQ=255)

                                                                        aggaggTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTTGAACCg                                                                               >  1:1225023/1‑151 (MQ=255)

                                                                         ggaggTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCgg                                                                              <  1:264351/151‑1 (MQ=255)

                                                                          gaggTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGc                                                                             <  1:885189/151‑1 (MQ=255)

                                                                           aggTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCa                                                                            <  1:2342855/151‑1 (MQ=255)

                                                                               tACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGt                                                                        >  1:782442/1‑151 (MQ=255)

                                                                                aCTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTa                                                                       <  1:2771134/151‑1 (MQ=255)

                                                                                 cTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTAt                                                                      <  1:1720267/151‑1 (MQ=255)

                                                                                  ttttttCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTAtt                                                                     <  1:1733392/151‑1 (MQ=255)

                                                                                       tCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTAc                                                                <  1:3001975/151‑1 (MQ=255)

                                                                                        cTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTAcc                                                               >  1:1893552/1‑151 (MQ=255)

                                                                                             cATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTgg                                                          >  1:2829795/1‑151 (MQ=255)

                                                                                              aTAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGa                                                         <  1:2629520/151‑1 (MQ=255)

                                                                                              aTAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGa                                                         <  1:2636662/151‑1 (MQ=255)

                                                                                                  acacTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGAtttt                                                     >  1:2797507/1‑151 (MQ=255)

                                                                                                    acTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGa                                                   >  1:506298/1‑151 (MQ=255)

                                                                                                    acTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGa                                                   <  1:2919566/151‑1 (MQ=255)

                                                                                                      tGTCTCTTTAGAACCACTGGCATAGCCAGTGGGTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGt                                                 >  1:1358694/1‑151 (MQ=255)

                                                                                                             ttAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGc                                          <  1:2360246/151‑1 (MQ=255)

                                                                                                              tAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCg                                         >  1:3276022/1‑151 (MQ=255)

                                                                                                               aGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGt                                        >  1:3084236/1‑151 (MQ=255)

                                                                                                                 aaCCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCt                                      >  1:1259752/1‑151 (MQ=255)

                                                                                                                     aCTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCa                                  >  1:1210559/1‑151 (MQ=255)

                                                                                                                      cTGGCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCaa                                 <  1:2474496/151‑1 (MQ=255)

                                                                                                                        ggCATAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAAtt                               >  1:199220/1‑151 (MQ=255)

                                                                                                                           aTAGCCAGTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTca                            >  1:1603694/1‑151 (MQ=255)

                                                                                                                                  gTGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTc                     >  1:1838850/1‑151 (MQ=255)

                                                                                                                                   tGGTTTTCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCg                    <  1:2586494/151‑1 (MQ=255)

                                                                                                                                      ttttCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCa                 >  1:420560/1‑151 (MQ=255)

                                                                                                                                      ttttCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCa                 <  1:3218998/151‑1 (MQ=255)

                                                                                                                                       tttCTTTAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCaa                <  1:3393069/151‑1 (MQ=255)

                                                                                                                                           tttAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTa            <  1:2030237/151‑1 (MQ=255)

                                                                                                                                             tAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTAtt          >  1:2936195/1‑151 (MQ=255)

                                                                                                                                             tAAACAAAAATAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTAtt          >  1:416420/1‑151 (MQ=255)

                                                                                                                                             aaacaaaaa‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTATtc         <  1:2533117/146‑1 (MQ=255)

                                                                                                                                              aacaaaaa‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTATtca        >  1:2045872/5‑151 (MQ=255)

                                                                                                                                               acaaaaa‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTATtcat       <  1:193137/148‑1 (MQ=255)

                                                                                                                                                 aaaaa‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTATtcatca     >  1:1578367/2‑151 (MQ=255)

                                                                                                                                                 aaaaa‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTATtcatca     >  1:811679/2‑151 (MQ=255)

                                                                                                                                                    aa‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTATTCatcaatc  <  1:600333/151‑1 (MQ=255)

ACTAGCATTATCACGCATCGTGATACCTCCTTTGTTTTTAATGTAGTTGGCAAACCTACATTATTGTAACAAAGGAGGTTACTTTTTTCTACTCATAGACACTGTCTCTTTAGAACCACTGGCATAGCCAGTGGTTTTCTTTAAACAAAA‑TAAAAAAACAAGGATTCCATTATCGAAATCCTTGGTTTCTTTTATCTGGTGCCGAAGGCCGGATTCGAACCGGCATGGTATTGCTACCGCTGGATTTTGAGTCCAGTGCGTCTGCCAATTTCACCACTTCGGCAAGTTATTCATCAATC  >  CP002416/2005598‑2005896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`