BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP002416	1,269,424	(A)_7→8	intergenic (+108/‑4134)	Clo1313_1060 → / → Clo1313_1065	Hedgehog/intein hint domain protein/Domain of unknown function DUF1910

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP002416	1,269,424	1	.	A	100.0%	503.0 / NA	125	intergenic (+108/‑4134)	Clo1313_1060/Clo1313_1065	Hedgehog/intein hint domain protein/Domain of unknown function DUF1910
Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (65/60); total (65/60)

Only 100 of 139 total aligned reads displayed.

AGGTTAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAA‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCATCCGGATGA  >  CP002416/1269275‑1269574

aGGTTAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTaaaaaaaa                                                                                                                                                        >  1:3096182/1‑150 (MQ=255)

 ggTTAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTaaaaaaaag                                                                                                                                                       >  1:2197813/1‑149 (MQ=255)

 ggTTAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCACTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTaaaaaaaag                                                                                                                                                       <  1:3331653/151‑3 (MQ=255)

    tAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTaaaaaaaagatt                                                                                                                                                    <  1:1185065/151‑6 (MQ=255)

    tAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTaaaaaaaagatt                                                                                                                                                    >  1:2293964/1‑146 (MQ=255)

     aaaCAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTg                                                                                                                                                   >  1:603185/1‑151 (MQ=255)

             aTGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTg                                                                                                                                           >  1:1295645/1‑151 (MQ=255)

              tGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGa                                                                                                                                          >  1:1552718/1‑151 (MQ=255)

               ggTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGaa                                                                                                                                         >  1:3241211/1‑151 (MQ=255)

                gTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGaaa                                                                                                                                        >  1:1124020/1‑151 (MQ=255)

                gTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGaaa                                                                                                                                        <  1:1990823/151‑1 (MQ=255)

                 tGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAg                                                                                                                                       <  1:1609594/151‑1 (MQ=255)

                  gAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAga                                                                                                                                      >  1:3013678/1‑151 (MQ=255)

                  gAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAga                                                                                                                                      <  1:2927994/151‑1 (MQ=255)

                   aaaTAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAgat                                                                                                                                     >  1:357636/1‑151 (MQ=255)

                     ataatTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAgatga                                                                                                                                   >  1:1759113/1‑151 (MQ=255)

                       aatTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGata                                                                                                                                 >  1:1530533/1‑151 (MQ=255)

                       aatTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGata                                                                                                                                 >  1:1850247/1‑151 (MQ=255)

                          tGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATgg                                                                                                                              <  1:627727/151‑1 (MQ=255)

                            gATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGaa                                                                                                                            <  1:3264689/151‑1 (MQ=255)

                            gATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGaa                                                                                                                            >  1:1238405/1‑151 (MQ=255)

                             aTTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGaaa                                                                                                                           <  1:1033595/151‑1 (MQ=255)

                             aTTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCAGAAAGATGATATGGaaa                                                                                                                           <  1:1408209/151‑1 (MQ=255)

                              ttCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGaaaa                                                                                                                          <  1:3131547/151‑1 (MQ=255)

                               tCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGaaaaa                                                                                                                         >  1:1635894/1‑151 (MQ=255)

                               tCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGaaaaa                                                                                                                         >  1:57254/1‑151 (MQ=255)

                                 tGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAgg                                                                                                                       <  1:1006684/151‑1 (MQ=255)

                                   gCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGta                                                                                                                     <  1:855661/151‑1 (MQ=255)

                                    ccATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGtat                                                                                                                    <  1:2421631/151‑1 (MQ=255)

                                     cATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGtata                                                                                                                   >  1:2258860/1‑151 (MQ=255)

                                       taaataaCAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACa                                                                                                                 >  1:2409224/1‑151 (MQ=255)

                                        aaataaCAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACaa                                                                                                                >  1:3351079/1‑151 (MQ=255)

                                        aaataaCAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACaa                                                                                                                >  1:217818/1‑151 (MQ=255)

                                        aaataaCAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACaa                                                                                                                >  1:2154307/1‑151 (MQ=255)

                                         aataaCAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACaaa                                                                                                               <  1:2766186/151‑1 (MQ=255)

                                              cAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATGCTGAAAGATGATATGGAAAAAGGTATACAAAGatat                                                                                                          <  1:3460931/151‑1 (MQ=255)

                                                  tGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCaa                                                                                                      >  1:478295/1‑151 (MQ=255)

                                                    aaaaGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAgg                                                                                                    >  1:2582819/1‑151 (MQ=255)

                                                    aaaaGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAgg                                                                                                    <  1:2900571/151‑1 (MQ=255)

                                                    aaaaGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAgg                                                                                                    <  1:3440215/151‑1 (MQ=255)

                                                    aaaaGGAGATGATGGCATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACACAGAAGGACTTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAgg                                                                                                    >  1:947680/1‑151 (MQ=18)

                                                      aaGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGa                                                                                                  >  1:654996/1‑151 (MQ=255)

                                                       aGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGAt                                                                                                 <  1:1716094/151‑1 (MQ=255)

                                                        ggAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATa                                                                                                <  1:1789310/151‑1 (MQ=255)

                                                            atgatgGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCa                                                                                            >  1:248044/1‑151 (MQ=255)

                                                             tgatgGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCaa                                                                                           >  1:396528/1‑151 (MQ=255)

                                                                 ggTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCa                                                                                       >  1:490365/1‑151 (MQ=255)

                                                                   tATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATa                                                                                     <  1:863816/151‑1 (MQ=255)

                                                                   tATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATa                                                                                     <  1:3083855/151‑1 (MQ=255)

                                                                     tGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAAt                                                                                   >  1:464001/1‑151 (MQ=255)

                                                                     tGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAAt                                                                                   >  1:1771353/1‑151 (MQ=255)

                                                                        gagaTCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTa                                                                                <  1:415807/151‑1 (MQ=255)

                                                                         agatgagTTATGCAGTGAAAGTTATTTAGTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTAGACAAAGATATCCAAGGGATAATCAAAGCATAATTTAt                                                                               <  1:3002227/145‑1 (MQ=21)

                                                                         agaTCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTAt                                                                               >  1:3027129/1‑151 (MQ=255)

                                                                         agaTCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTAt                                                                               <  1:1940866/151‑1 (MQ=255)

                                                                              cGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTAc                                                                          <  1:895179/151‑1 (MQ=255)

                                                                               gTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACg                                                                         >  1:1329209/1‑151 (MQ=255)

                                                                                ttATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGt                                                                        >  1:3076151/1‑151 (MQ=255)

                                                                                  aTGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGttt                                                                      <  1:403230/151‑1 (MQ=255)

                                                                                    gCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGttttt                                                                    >  1:2535884/1‑151 (MQ=255)

                                                                                       gTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACa                                                                 <  1:1140831/151‑1 (MQ=255)

                                                                                        tGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACat                                                                >  1:702221/1‑151 (MQ=255)

                                                                                           aaGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATg                                                             >  1:1633892/1‑151 (MQ=255)

                                                                                                atttattAGAAACAATAGAATATGACAAAGAAGGAGTTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTAt                                                        <  1:3311298/151‑1 (MQ=255)

                                                                                                 tttattAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATg                                                       >  1:1401176/1‑151 (MQ=255)

                                                                                                  ttattaGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGt                                                      <  1:2237568/151‑1 (MQ=255)

                                                                                                   tattaGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGta                                                     <  1:928000/151‑1 (MQ=255)

                                                                                                   tattaGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGta                                                     >  1:33040/1‑151 (MQ=255)

                                                                                                       aGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAac                                                 <  1:1878811/151‑1 (MQ=255)

                                                                                                        gAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAaca                                                >  1:1335799/1‑151 (MQ=255)

                                                                                                           aCAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACgg                                             <  1:480749/151‑1 (MQ=255)

                                                                                                            cAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGa                                            <  1:2722867/151‑1 (MQ=255)

                                                                                                             aaTAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGaa                                           <  1:3169693/151‑1 (MQ=255)

                                                                                                              aTAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGaaa                                          >  1:1584857/1‑151 (MQ=255)

                                                                                                              aTAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGaaa                                          <  1:1533987/151‑1 (MQ=255)

                                                                                                                 gAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGc                                       >  1:2647870/1‑151 (MQ=255)

                                                                                                                  aaTATGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCt                                      <  1:585925/151‑1 (MQ=255)

                                                                                                                     atGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTAc                                   <  1:1181146/151‑1 (MQ=255)

                                                                                                                     atGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTAc                                   <  1:192071/151‑1 (MQ=255)

                                                                                                                      tGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACa                                  >  1:567353/1‑151 (MQ=255)

                                                                                                                      tGACAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACa                                  >  1:1001674/1‑151 (MQ=255)

                                                                                                                         cAAAGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGcc                               >  1:1365994/1‑151 (MQ=255)

                                                                                                                          aaaGAAGGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCa                              >  1:1122286/1‑151 (MQ=255)

                                                                                                                           aagaagGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCaa                             >  1:1703706/1‑151 (MQ=255)

                                                                                                                           aagaagGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCaa                             <  1:1899349/151‑1 (MQ=255)

                                                                                                                            agaagGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCaaa                            >  1:213940/1‑151 (MQ=255)

                                                                                                                            agaagGAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCaaa                            >  1:2789874/1‑151 (MQ=255)

                                                                                                                                 gAATTTGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATActc                       >  1:914685/1‑151 (MQ=255)

                                                                                                                                    tttGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCttt                    <  1:2842325/151‑1 (MQ=255)

                                                                                                                                     ttGTAAAAGTAAAAAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTa                   <  1:2625619/151‑1 (MQ=255)

                                                                                                                                        taaaagtaaaaAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGt                <  1:514664/151‑1 (MQ=255)

                                                                                                                                         aaaagtaaaaAAAAGATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTa               >  1:2705854/1‑151 (MQ=255)

                                                                                                                                           agtaaaaaaaa‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTc            >  1:2130975/5‑151 (MQ=255)

                                                                                                                                            gtaaaaaaaa‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCa           >  1:3215856/4‑151 (MQ=255)

                                                                                                                                            gtaaaaaaaa‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCa           >  1:1569891/4‑151 (MQ=255)

                                                                                                                                             taaaaaaaa‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCAt          >  1:898708/3‑151 (MQ=255)

                                                                                                                                                aaaaaa‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCATCCg       >  1:1382221/1‑151 (MQ=255)

                                                                                                                                                  aaaa‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCATCCGGa     >  1:740491/1‑151 (MQ=255)

                                                                                                                                                     a‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCATCCGGATGa  >  1:2561857/1‑151 (MQ=255)

                                                                                                                                                     a‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCATCCGGATGa  >  1:2020205/1‑151 (MQ=255)

AGGTTAAACAGCAATGGTGAAATAATTGGATTCTGGCCATAAATAACAAATGAAAAGGAGATGATGGTATGAGAGATCCGTTATGCAGTGAAAGTTATTTATTAGAAACAATAGAATATGACAAAGAAGGAATTTGTAAAAGTAAAAAAA‑GATTGTTATTCTGAAAGATGATATGGAAAAAGGTATACAAAGATATCCAAGGGATAATCAAAGCATAATTTATGCTACGTTTTTACATATGTTTATGTATAACACGGAAATGCTTACAGCCAAATACTCTTTAGGTAGTCATCCGGATGA  >  CP002416/1269275‑1269574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`