BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP002416	3,265,062	(T)_7→6	intergenic (‑276/‑15)	Clo1313_2779 ← / → Clo1313_2780	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP002416	3,265,062	0	T	.	100.0%	780.9 / NA	165	intergenic (‑276/‑15)	Clo1313_2779/Clo1313_2780	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (94/71); total (94/71)

Only 100 of 175 total aligned reads displayed.

TAAAATAAAGATAATCTAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTTTCAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATGGTCGGAGATAAAATCG  >  CP002416/3264916‑3265212

tAAAATAAAGATAATCTAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGtc                                                                                                                                                   >  1:2935641/1‑151 (MQ=255)

tAAAATAAAGATAATCTAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGtc                                                                                                                                                   >  1:2081782/1‑151 (MQ=255)

tAAAATAAAGATAATCTAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGtc                                                                                                                                                   >  1:20406/1‑151 (MQ=255)

 aaaaTAAAGATAATCTAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGtct                                                                                                                                                  >  1:2836798/1‑151 (MQ=255)

  aaaTAAAGATAATCTAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGtctc                                                                                                                                                 >  1:1825367/1‑151 (MQ=255)

   aaTAAAGATAATCTAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTcc                                                                                                                                                >  1:2954309/1‑151 (MQ=255)

    aTAAAGATAATCTAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCt                                                                                                                                               >  1:962070/1‑151 (MQ=255)

        aGATAATCTAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTa                                                                                                                                           <  1:1003083/151‑1 (MQ=255)

        aGATAATCTAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTa                                                                                                                                           >  1:1617760/1‑151 (MQ=255)

          aTAATCTAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACa                                                                                                                                         >  1:1214661/1‑151 (MQ=255)

            aaTCTAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATg                                                                                                                                       >  1:2187131/1‑151 (MQ=255)

             aTCTAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGt                                                                                                                                      >  1:641230/1‑151 (MQ=255)

                tAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCAc                                                                                                                                   >  1:2564653/1‑151 (MQ=255)

                  aaTATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTa                                                                                                                                 <  1:404285/151‑1 (MQ=255)

                    tatatGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTaaa                                                                                                                               >  1:760528/1‑151 (MQ=255)

                      tatGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGc                                                                                                                             >  1:1041895/1‑151 (MQ=255)

                       atGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCa                                                                                                                            <  1:840743/151‑1 (MQ=255)

                           aaCAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCaaaaa                                                                                                                        >  1:1942632/1‑151 (MQ=255)

                              aaaaaaaTTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGac                                                                                                                     <  1:2760259/151‑1 (MQ=255)

                                  aaaTTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACAcca                                                                                                                 <  1:349295/151‑2 (MQ=255)

                                   aaTTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCGCTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGa                                                                                                                >  1:2803631/1‑151 (MQ=255)

                                        cAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAAttt                                                                                                           <  1:1294234/151‑1 (MQ=255)

                                          aaGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTAt                                                                                                         >  1:1072855/1‑151 (MQ=255)

                                           aGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATc                                                                                                        >  1:2069091/1‑151 (MQ=255)

                                            gATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCa                                                                                                       <  1:558576/151‑1 (MQ=255)

                                             atatGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCAt                                                                                                      >  1:153613/1‑151 (MQ=255)

                                              tatGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATa                                                                                                     <  1:1593652/151‑1 (MQ=255)

                                               atGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAACAAAAAGACACCGAAATTTATCATaa                                                                                                    <  1:447215/151‑1 (MQ=255)

                                                tgtgAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAAt                                                                                                   <  1:2836797/151‑1 (MQ=255)

                                                  tgAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATcc                                                                                                 >  1:255291/1‑151 (MQ=255)

                                                   gAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCct                                                                                                <  1:2307484/151‑1 (MQ=255)

                                                   gAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCct                                                                                                >  1:1983239/1‑151 (MQ=255)

                                                         tGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATa                                                                                          >  1:494464/1‑151 (MQ=255)

                                                            tAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATAccc                                                                                       >  1:1723452/1‑151 (MQ=255)

                                                              aTGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTc                                                                                     >  1:2127208/1‑151 (MQ=255)

                                                               tGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTcc                                                                                    <  1:248329/151‑1 (MQ=255)

                                                                gAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCg                                                                                   >  1:303753/1‑151 (MQ=255)

                                                                gAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCg                                                                                   >  1:1794387/1‑151 (MQ=255)

                                                                      aTGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAg                                                                             >  1:3015755/1‑151 (MQ=255)

                                                                        ggAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGAt                                                                           <  1:1639750/151‑1 (MQ=255)

                                                                          aaTATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTg                                                                         >  1:208447/1‑151 (MQ=255)

                                                                           atatTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTgg                                                                        <  1:729409/151‑1 (MQ=255)

                                                                           atatTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTgg                                                                        >  1:1430535/1‑151 (MQ=255)

                                                                            tatTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGa                                                                       >  1:1245596/1‑151 (MQ=255)

                                                                            tatTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGa                                                                       >  1:1807497/1‑151 (MQ=255)

                                                                             atTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGaa                                                                      >  1:2524215/1‑151 (MQ=255)

                                                                             atTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGaa                                                                      <  1:625420/151‑1 (MQ=255)

                                                                                tGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGaataa                                                                   >  1:3128979/1‑151 (MQ=255)

                                                                                      gTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCcac                                                             >  1:1746873/1‑151 (MQ=255)

                                                                                       tAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCcaca                                                            >  1:3001740/1‑151 (MQ=255)

                                                                                         aCTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACata                                                          >  1:1149524/1‑151 (MQ=255)

                                                                                            aCAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACatatat                                                       <  1:2716063/151‑1 (MQ=255)

                                                                                            aCAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACatatat                                                       <  1:2509867/151‑1 (MQ=255)

                                                                                               aaGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTg                                                    <  1:1908922/151‑1 (MQ=255)

                                                                                                aGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGt                                                   >  1:3187234/1‑151 (MQ=255)

                                                                                                aGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGt                                                   <  1:3124791/151‑1 (MQ=255)

                                                                                                aGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGt                                                   >  1:172903/1‑151 (MQ=255)

                                                                                                aGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGt                                                   >  1:2272667/1‑151 (MQ=255)

                                                                                                 gATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACGCCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGtt                                                  <  1:3272912/151‑1 (MQ=255)

                                                                                                   tAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCa                                                >  1:1826889/1‑151 (MQ=255)

                                                                                                   tAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCa                                                >  1:2428259/1‑151 (MQ=255)

                                                                                                   tAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCa                                                >  1:2094669/1‑151 (MQ=255)

                                                                                                    aaTTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCaa                                               <  1:799254/151‑1 (MQ=255)

                                                                                                       tttAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCg                                            >  1:1504344/1‑151 (MQ=255)

                                                                                                       tttAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCg                                            <  1:3013848/151‑1 (MQ=255)

                                                                                                         tAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAATTTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGAt                                          >  1:873444/1‑151 (MQ=255)

                                                                                                            aaaTATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGAtttt                                       >  1:422187/1‑151 (MQ=255)

                                                                                                            aaaTATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGAtttt                                       <  1:2735765/151‑1 (MQ=255)

                                                                                                             aaTATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTg                                      <  1:776683/151‑1 (MQ=255)

                                                                                                             aaTATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTg                                      <  1:3408289/151‑1 (MQ=255)

                                                                                                              atatAGCAGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGt                                     >  1:2993877/1‑151 (MQ=255)

                                                                                                                     aGTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATtgat                              <  1:1318976/151‑1 (MQ=255)

                                                                                                                      gTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATtgatg                             >  1:2860863/1‑151 (MQ=255)

                                                                                                                      gTTTCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATtgatg                             <  1:1185225/151‑1 (MQ=255)

                                                                                                                       tttCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATtgatga                            <  1:2642108/151‑1 (MQ=255)

                                                                                                                        ttCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTgatgat                           >  1:2752760/1‑151 (MQ=255)

                                                                                                                         tCTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGata                          >  1:3025387/1‑151 (MQ=255)

                                                                                                                          cTTTGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGatat                         <  1:1992915/151‑1 (MQ=255)

                                                                                                                           tttGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAGTTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGAtata                        >  1:3304312/1‑151 (MQ=255)

                                                                                                                            ttGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATaa                       >  1:3396587/1‑151 (MQ=255)

                                                                                                                             tGGCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATaaa                      >  1:2209630/1‑151 (MQ=255)

                                                                                                                              ggCACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAat                     <  1:366641/151‑1 (MQ=255)

                                                                                                                                cACTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAatat                   >  1:1109132/1‑151 (MQ=255)

                                                                                                                                 aCTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATg                  >  1:1685590/1‑151 (MQ=255)

                                                                                                                                  cTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATgg                 >  1:548101/1‑151 (MQ=255)

                                                                                                                                  cTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATgg                 >  1:336424/1‑151 (MQ=255)

                                                                                                                                  cTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATgg                 <  1:714217/151‑1 (MQ=255)

                                                                                                                                  cTTTTAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATgg                 >  1:281868/1‑151 (MQ=255)

                                                                                                                                   ttttAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATGGt                >  1:3284905/1‑151 (MQ=255)

                                                                                                                                    tttAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATGGTc               >  1:1513640/1‑151 (MQ=255)

                                                                                                                                    tttAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATGGTc               <  1:2662842/151‑1 (MQ=255)

                                                                                                                                    tttAACTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATGGTc               >  1:2193342/1‑151 (MQ=255)

                                                                                                                                       aaCTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATGGTCGga            >  1:538020/1‑151 (MQ=255)

                                                                                                                                       aaCTCTTTTTT‑CAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATGGTCGga            <  1:2328715/151‑1 (MQ=255)

                                                                                                                                             ttttttCAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATGGTCGGAGATaa       <  1:3401456/151‑1 (MQ=255)

                                                                                                                                               ttttCAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATGGTCGGAGATaaaa     <  1:58055/151‑1 (MQ=255)

                                                                                                                                                tttCAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATGGTCGGAGATAAAAt    >  1:2896781/1‑151 (MQ=255)

                                                                                                                                                  tCAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATGGTCGGAGATAAAATCg  >  1:3257981/1‑151 (MQ=255)

                                                                                                                                                  tCAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATGGTCGGAGATAAAATCg  <  1:668547/151‑1 (MQ=255)

                                                                                                                                                  tCAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATGGTCGGAGATAAAATCg  >  1:1476553/1‑151 (MQ=255)

TAAAATAAAGATAATCTAAATATATGAAACAAAAAAATTGCAAAGATATGTGAATATTGGTAATGAAATTATGGAATATTTGGAAAGTAACTACAAAGATAATTTTAAAAATATAGCAGTTTCTTTGGCACTTTTAACTCTTTTTTTCAGTCTCCTTGTACATGTCACTAAAGCAAAAAGACACCGAAATTTATCATAATCCTCTGATACCCTCCGTAATAGATTGGAATAATTCCACATATATTTGTTCAAGCGATTTTGTCATTGATGATATAAATATGGTCGGAGATAAAATCG  >  CP002416/3264916‑3265212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`