BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP002416	3,264,115	(A)_7→6	coding (672/711 nt)	Clo1313_2779 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP002416	3,264,115	0	A	.	99.3%	698.3 / ‑2.7	152	coding (672/711 nt)	Clo1313_2779	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base . (83/68); total (83/69)
Fisher's exact test for biased strand distribution p-value = 4.54e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.61e-01

Only 100 of 160 total aligned reads displayed.

CCTCAGTTTTGAATGTTGCTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAAAGCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCAAACCTATCGAAAGTTCC  >  CP002416/3263970‑3264265

 cTCAGTTTTGAATGTTGCTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTggg                                                                                                                                                 >  1:1826281/1‑151 (MQ=255)

 cTCAGTTTTGAATGTTGCTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAACACCCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTggg                                                                                                                                                 <  1:335619/151‑1 (MQ=255)

   cAGTTTTGAATGTTGCTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTa                                                                                                                                               >  1:1644661/1‑151 (MQ=255)

    aGTTTTGAATGTTGCTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTaa                                                                                                                                              >  1:806669/1‑151 (MQ=255)

       tttGAATGTTGCTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAata                                                                                                                                           >  1:282613/1‑151 (MQ=255)

        ttGAATGTTGCTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAatat                                                                                                                                          <  1:601226/151‑1 (MQ=255)

         tGAATGTTGCTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAatata                                                                                                                                         <  1:1004749/151‑1 (MQ=255)

          gAATGTTGCTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAatatat                                                                                                                                        >  1:38068/1‑151 (MQ=255)

           aaTGTTGCTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATAtt                                                                                                                                       >  1:3139725/1‑151 (MQ=255)

             tGTTGCTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTACCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTaa                                                                                                                                     <  1:2387618/151‑1 (MQ=255)

                 cctcaagaaaGTTTGCATACAGGAAACCTCCGGCTATCATTATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGc                                                                                                                                 <  1:2391958/143‑1 (MQ=255)

                  cTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGcc                                                                                                                                >  1:2673200/1‑151 (MQ=255)

                  cTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGcc                                                                                                                                >  1:1273792/1‑151 (MQ=255)

                  cTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGcc                                                                                                                                >  1:3142782/1‑151 (MQ=255)

                   tCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCa                                                                                                                               >  1:3025957/1‑151 (MQ=255)

                     cAGGAAGTTTGCATACAGGTAAACTACAGCTATCAATATTATCAATTAAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCaaa                                                                                                                             <  1:1682042/151‑1 (MQ=255)

                          agttgacATACAGGAAAACTTCGGCTATCAAAATTATCAATAAAAGAAAAAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACgg                                                                                                                        <  1:3334488/145‑1 (MQ=255)

                           gTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGc                                                                                                                       <  1:2280052/151‑1 (MQ=255)

                             ttGCATACAGGTAAACTTCAGCTATCAATATTATCAGTTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGcac                                                                                                                     >  1:718071/1‑151 (MQ=255)

                             ttGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGcac                                                                                                                     >  1:2071418/1‑151 (MQ=255)

                               gCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCacac                                                                                                                   <  1:1524198/151‑1 (MQ=255)

                                  aaCAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGt                                                                                                                <  1:1484097/150‑1 (MQ=255)

                                   aCAGGTAACCTTCACCTATCAATATTATCAATTAAAAAAGAAAACACGCAAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTc                                                                                                               <  1:1650746/151‑1 (MQ=255)

                                   aCAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTc                                                                                                               >  1:273883/1‑151 (MQ=255)

                                    cagttAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTcg                                                                                                              <  1:1888164/147‑1 (MQ=255)

                                        tAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCt                                                                                                          >  1:889890/1‑151 (MQ=255)

                                             ttCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATg                                                                                                     >  1:1506856/1‑151 (MQ=255)

                                             ttCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATg                                                                                                     >  1:2871779/1‑151 (MQ=255)

                                              tCAGCTTTCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGt                                                                                                    >  1:1935735/1‑151 (MQ=255)

                                              tCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGt                                                                                                    >  1:1442103/1‑151 (MQ=255)

                                              tCAGCTATCAATATTATCAATTCAAGAAGCAAATACCCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGt                                                                                                    <  1:43290/151‑1 (MQ=255)

                                               cAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTc                                                                                                   >  1:2478255/1‑151 (MQ=255)

                                                 ccTATCAATATTATCAATTCAAGAGGCAAAAGCGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCaa                                                                                                 <  1:39312/150‑1 (MQ=255)

                                                   tATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAAt                                                                                               >  1:2868026/1‑151 (MQ=255)

                                                    aTCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATc                                                                                              >  1:681982/1‑151 (MQ=255)

                                                     tCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCt                                                                                             <  1:3480246/151‑1 (MQ=255)

                                                     tCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCt                                                                                             <  1:740629/151‑1 (MQ=255)

                                                      cAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTa                                                                                            >  1:2189993/1‑151 (MQ=255)

                                                        atatTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTaaa                                                                                          >  1:1444784/1‑151 (MQ=255)

                                                            tatCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGc                                                                                      >  1:2297879/1‑151 (MQ=255)

                                                                aaTTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCaata                                                                                  >  1:1804881/1‑151 (MQ=255)

                                                                 atacagaaagCAAACCCGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCGCACCGTCGCGCTCCATGTCAAATCTAAACAGCaataa                                                                                 <  1:2268558/144‑1 (MQ=255)

                                                                     aagaagCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACa                                                                             >  1:1442798/1‑151 (MQ=255)

                                                                      agaagCAAATCCGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACaa                                                                            <  1:2583872/151‑1 (MQ=255)

                                                                        aagCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGt                                                                          >  1:1780712/1‑151 (MQ=255)

                                                                          gCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTcc                                                                        >  1:1418431/1‑151 (MQ=255)

                                                                            aaaTACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCtt                                                                      >  1:3303575/1‑151 (MQ=255)

                                                                            aaaTACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCtt                                                                      >  1:2646715/1‑151 (MQ=255)

                                                                             aaTACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTc                                                                     <  1:2581898/151‑1 (MQ=255)

                                                                                aCGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTcaac                                                                  >  1:3078631/1‑151 (MQ=255)

                                                                                  gCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTcaacaa                                                                >  1:2628465/1‑151 (MQ=255)

                                                                                   ccAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAAcaat                                                               <  1:2047241/151‑1 (MQ=255)

                                                                                   ccAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAAcaat                                                               >  1:479040/1‑151 (MQ=255)

                                                                                   ccAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAAcaat                                                               >  1:3335522/1‑151 (MQ=255)

                                                                                     aaaaCCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCT‑GAAAAAAGCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAAcaatca                                                             <  1:125997/151‑1 (MQ=255)

                                                                                        aCCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATg                                                          <  1:480175/151‑1 (MQ=255)

                                                                                          cGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGcc                                                        >  1:1458571/1‑151 (MQ=255)

                                                                                             cTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTc                                                     >  1:146933/1‑151 (MQ=255)

                                                                                              tCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCa                                                    >  1:3429808/1‑151 (MQ=255)

                                                                                                cACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCaaa                                                  >  1:1053813/1‑151 (MQ=255)

                                                                                                cACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCaaa                                                  <  1:1235801/151‑1 (MQ=255)

                                                                                                   ccTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAg                                               >  1:2288809/1‑151 (MQ=255)

                                                                                                   ccTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAg                                               <  1:1273241/151‑1 (MQ=255)

                                                                                                     taccTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGt                                             <  1:978348/149‑1 (MQ=255)

                                                                                                      tCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTg                                            >  1:119663/1‑151 (MQ=255)

                                                                                                         tctACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGcaa                                         <  1:1436655/151‑1 (MQ=255)

                                                                                                          ctACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGcaaa                                        <  1:1081316/151‑1 (MQ=255)

                                                                                                          ctACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGcaaa                                        <  1:1354510/151‑1 (MQ=255)

                                                                                                                tAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATa                                  >  1:1009092/1‑151 (MQ=255)

                                                                                                                tAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATa                                  >  1:2538768/1‑151 (MQ=255)

                                                                                                                tAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATa                                  <  1:1122538/151‑1 (MQ=255)

                                                                                                                tAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATa                                  >  1:1226369/1‑151 (MQ=255)

                                                                                                                 agagCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATaa                                 <  1:276979/151‑1 (MQ=255)

                                                                                                                  gagCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATaaa                                <  1:1696240/151‑1 (MQ=255)

                                                                                                                    gCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAAt                              >  1:2129814/1‑151 (MQ=255)

                                                                                                                    gCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAAt                              <  1:856486/151‑1 (MQ=255)

                                                                                                                    gCACAGCAGCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAAt                              <  1:1505744/151‑1 (MQ=255)

                                                                                                                       cagcagCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCaa                           >  1:2966038/1‑151 (MQ=255)

                                                                                                                       cagcagCCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCGTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCaa                           <  1:549676/151‑1 (MQ=255)

                                                                                                                           agcCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACTCCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCaaaaaa                       <  1:640381/151‑1 (MQ=255)

                                                                                                                           agcCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCaaaaaa                       >  1:1429644/1‑151 (MQ=255)

                                                                                                                            gcCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAg                      <  1:1551661/151‑1 (MQ=255)

                                                                                                                            gcCAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAg                      <  1:1545397/151‑1 (MQ=255)

                                                                                                                             ccAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGc                     >  1:2450003/1‑151 (MQ=255)

                                                                                                                              cAAAAGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGcc                    >  1:3440568/1‑151 (MQ=255)

                                                                                                                               aaaaGAAGGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCa                   <  1:937410/151‑1 (MQ=255)

                                                                                                                                 aagaagGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCaaa                 >  1:268809/1‑151 (MQ=255)

                                                                                                                                 aagaagGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCaaa                 >  1:118262/1‑151 (MQ=255)

                                                                                                                                 aagaagGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCaaa                 >  1:2418723/1‑151 (MQ=255)

                                                                                                                                 aagaagGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCaaa                 <  1:1712557/151‑1 (MQ=255)

                                                                                                                                 aagaagGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCaaa                 >  1:20857/1‑151 (MQ=255)

                                                                                                                                  agaagGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCAAAc                >  1:2671203/1‑151 (MQ=255)

                                                                                                                                   gaagGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCAAAcc               <  1:1711943/151‑1 (MQ=255)

                                                                                                                                    aagGCTCAAAAAA‑GCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCAAACCt              <  1:707085/151‑1 (MQ=255)

                                                                                                                                        gctcaaaaaaGCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCAAACCTATc           <  1:1705959/147‑1 (MQ=255)

                                                                                                                                        gctcaaaaaaGCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCATCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCAACCCTATc           <  1:2199783/147‑1 (MQ=255)

                                                                                                                                              aaaaGCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCAAACCTATCGAAAGt     >  1:1967949/1‑151 (MQ=255)

                                                                                                                                               aaaGCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCAAACCTATCGAAAGtt    >  1:2489324/1‑151 (MQ=255)

                                                                                                                                                 aGCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCAAACCTATCGAAAGTTcc  <  1:3419361/151‑1 (MQ=255)

                                                                                                                                                 aGCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCAAACCTATCGAAAGTTcc  >  1:933599/1‑151 (MQ=255)

CCTCAGTTTTGAATGTTGCTCCAGGAAGTTTGCATACAGGTAAACTTCAGCTATCAATATTATCAATTCAAGAAGCAAATACGCCAAAACCGCCTCCACCCTTCCTCTACTGTAGAGCACAGCAGCCAAAAGAAGGCTCAAAAAAAGCCTGGGTAAATATATTAATTGCCAAAAACGGCACACCGTCGCGCTCCATGTCAAATCTAAACAGCAATAATACAAGTCCTTCAACAATCAATGCCTTCAAACAGGTGCAAACAAATAAAATCAAAAAAGCCAAACCTATCGAAAGTTCC  >  CP002416/3263970‑3264265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`