Predicted mutation
evidence seq id position mutation annotation gene description
RA CP002416 2,246,623 (A)6→5 intergenic (‑331/+175) Clo1313_1918 ← / ← Clo1313_1920 excinuclease ABC, B subunit/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0024162,246,6230A.100.0% 573.7 / NA 122intergenic (‑331/+175)Clo1313_1918/Clo1313_1920excinuclease ABC, B subunit/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (69/53);  total (69/53)

Only 100 of 129 total aligned reads displayed.

AAAAGCCGCGGTATCAAAGCCTGTGAATTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAAATCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATCCCGGGCAGGGAATGCCAAAAAAATT  >  CP002416/2246477‑2246773
                                                                                                                                                   |                                                                                                                                                      
 aaaGCCGCGGTATCAAAGCCTGTGAATTGTAATTCATCGGCGGAATGTCAGAAAAAAACA‑GTCCTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCtgtt                                                                                                                                                  <  1:1205296/151‑1 (MQ=255)
  aaGCCGCGGTATCAAAGCCTGTGAATTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCtgttg                                                                                                                                                 >  1:1573692/1‑151 (MQ=255)
  aaGCCGCGGTATCAAAGCCTGTGAATTGTAATTCACCGGCGGAATGTCAGAAAAAACCA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCtgttg                                                                                                                                                 <  1:684214/151‑1 (MQ=255)
    gCCGCGGTATCAAAGCCTGTGAATTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTgttgtt                                                                                                                                               <  1:196139/151‑1 (MQ=255)
     ccGCGGTATCAAAGCCTGTGAATTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGttt                                                                                                                                              >  1:2652359/1‑151 (MQ=255)
            aTCAAAGCCTGTGAATTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGaaaa                                                                                                                                       <  1:908752/151‑1 (MQ=255)
            aTCAAAGCCTGTGAATTGTAATTCATCGGCGGAATGTCAGAAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGaaaa                                                                                                                                       <  1:679531/151‑1 (MQ=255)
               aaaGCCTTTGAATTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAaacaa                                                                                                                                    <  1:2715677/151‑1 (MQ=255)
               aaaGCCTGTGAATTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAaacaa                                                                                                                                    >  1:501003/1‑151 (MQ=255)
                aaGCCTGTGAATTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAaacaac                                                                                                                                   >  1:1751318/1‑151 (MQ=255)
                aaGCCTGTGAATTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAaacaac                                                                                                                                   >  1:2509688/1‑151 (MQ=255)
                 aGCCTGTGAATTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAaacaaca                                                                                                                                  >  1:1778185/1‑151 (MQ=255)
                    cTGTGAATTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAAcc                                                                                                                               >  1:209539/1‑151 (MQ=255)
                      gtgAATTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAACCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACcac                                                                                                                             <  1:323485/151‑1 (MQ=255)
                       tgAATTGTAATTCATCGGCGAAATGTAAGAAAAAACCA‑GTCCTCGCTTTACAACCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACcaca                                                                                                                            <  1:2970912/151‑1 (MQ=255)
                       taaaTTATAATTCATCGGCGGAATATCAGAAAAAAACA‑GTACTAGCCTTACAATCCCCACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACcaca                                                                                                                            <  1:2416483/149‑1 (MQ=255)
                       ggAATTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACcaca                                                                                                                            <  1:3031641/150‑1 (MQ=255)
                         aaTTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATCTTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGc                                                                                                                          >  1:2730327/1‑151 (MQ=255)
                         aaTTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGc                                                                                                                          >  1:1426337/1‑151 (MQ=255)
                          aTTGAAATCCATCGGCGGAATGTCAGAAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAAGACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGct                                                                                                                         <  1:790294/151‑1 (MQ=255)
                             gTAATCCATCGGGGAAATGTCAG‑AAAAAACAAGTACTAGCCTAAAAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGctact                                                                                                                      <  1:1898450/151‑1 (MQ=255)
                              aaaTTCACCGGCGGAATGTCAGAAAAAAACA‑GTACTAGCCTTACAATCCACACAAGACCAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGctacta                                                                                                                     <  1:2696028/150‑1 (MQ=255)
                               aaTTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTAAAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTaa                                                                                                                    <  1:805025/151‑1 (MQ=255)
                                aTTCATCGGCGAAATGTCAGGAAAAAACA‑GTCCTAGCCTTACAATCCACAAAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTaaa                                                                                                                   <  1:684224/151‑1 (MQ=255)
                                 ttCATCGGCGGAATGCCAGAAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAAc                                                                                                                  <  1:611342/151‑1 (MQ=255)
                                  tCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAAcc                                                                                                                 >  1:3199547/1‑151 (MQ=255)
                                  tCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAAcc                                                                                                                 <  1:1996565/151‑1 (MQ=255)
                                    aTCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCgg                                                                                                               >  1:1913510/1‑151 (MQ=255)
                                       ggcggAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGaa                                                                                                            >  1:2145223/1‑151 (MQ=255)
                                       ggcggAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGaa                                                                                                            >  1:1495265/1‑151 (MQ=255)
                                         cggAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGt                                                                                                          >  1:3155532/1‑151 (MQ=255)
                                             aTGTCAGAAAAAAACA‑GTACTAGCCTTACAACCCACACAAAAAAAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGaa                                                                                                      <  1:300985/151‑1 (MQ=255)
                                               gTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAAc                                                                                                    <  1:2509687/151‑1 (MQ=255)
                                                tCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACa                                                                                                   <  1:2326573/151‑1 (MQ=255)
                                                tCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACa                                                                                                   >  1:954456/1‑151 (MQ=255)
                                                 cAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACag                                                                                                  >  1:2672981/1‑151 (MQ=255)
                                                  aGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACaga                                                                                                 >  1:3214801/1‑151 (MQ=255)
                                                  aGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACaga                                                                                                 >  1:792034/1‑151 (MQ=255)
                                                   gaaaaaaaCA‑GTCCTAGCCTTACAATCCCCACAAGAACAAATGCCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACagag                                                                                                <  1:3389887/149‑1 (MQ=255)
                                                     aaaaaaCA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGga                                                                                              <  1:1920465/151‑1 (MQ=255)
                                                         accA‑GTCCTAGCCTTACAATCCACACAAAAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGgatgat                                                                                          <  1:630345/149‑1 (MQ=255)
                                                                cccaGCCTTAAAACCCACAAAAGAAAAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATaaa                                                                                    <  1:958865/148‑1 (MQ=255)
                                                                aCTAGCCTTACAACCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATaaa                                                                                    <  1:1920723/151‑1 (MQ=255)
                                                                  tAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATaaaaa                                                                                  >  1:2835238/1‑151 (MQ=255)
                                                                  tAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATaaaaa                                                                                  >  1:1802148/1‑151 (MQ=255)
                                                                  tAGCCTTACAACCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATaaaaa                                                                                  <  1:2569333/151‑1 (MQ=255)
                                                                  tAGCCTTACAACCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATaaaaa                                                                                  <  1:842654/151‑1 (MQ=255)
                                                                    gCCTTACAATCCACAAAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAACCCGGGAAGTAGAAACAGAGGATGATAATAAAAAGc                                                                                <  1:3016466/151‑1 (MQ=255)
                                                                     ccTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGcc                                                                               >  1:2598031/1‑151 (MQ=255)
                                                                      cTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCg                                                                              >  1:397312/1‑151 (MQ=255)
                                                                       ttACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGa                                                                             >  1:585117/1‑151 (MQ=255)
                                                                        tACAACCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGAt                                                                            <  1:1988023/151‑1 (MQ=255)
                                                                         aCAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATg                                                                           >  1:1664063/1‑151 (MQ=255)
                                                                         aCAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATg                                                                           >  1:8535/1‑151 (MQ=255)
                                                                           aaTCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTc                                                                         >  1:3152849/1‑151 (MQ=255)
                                                                              ccACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCaaa                                                                      >  1:2316609/1‑151 (MQ=255)
                                                                                   caAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGaa                                                                 >  1:1898599/1‑151 (MQ=255)
                                                                                    aaGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAAt                                                                >  1:2772101/1‑151 (MQ=255)
                                                                                    aaGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAAt                                                                <  1:265687/151‑1 (MQ=255)
                                                                                    aaGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAAt                                                                <  1:1059021/151‑1 (MQ=255)
                                                                                     aGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAAtt                                                               >  1:3032257/1‑151 (MQ=255)
                                                                                         caattACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAAt                                                           <  1:2488315/147‑1 (MQ=255)
                                                                                          aaaTACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATc                                                          >  1:246332/1‑151 (MQ=255)
                                                                                          aaaTACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATc                                                          >  1:3145775/1‑151 (MQ=255)
                                                                                           aaTACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCa                                                         >  1:1103544/1‑151 (MQ=255)
                                                                                           aaTACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCa                                                         <  1:541510/151‑1 (MQ=255)
                                                                                            aTACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCaa                                                        >  1:3196416/1‑151 (MQ=255)
                                                                                            aTACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCaa                                                        >  1:3330578/1‑151 (MQ=255)
                                                                                               ccGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACt                                                     >  1:2109739/1‑151 (MQ=255)
                                                                                                cGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTc                                                    <  1:1992685/151‑1 (MQ=255)
                                                                                                 gCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCa                                                   >  1:802884/1‑151 (MQ=255)
                                                                                                   cAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGCCAAATCGAATTTAATCAAACTCaaa                                                 >  1:2163648/1‑151 (MQ=255)
                                                                                                         acaacaCCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGcc                                           >  1:1307321/1‑151 (MQ=255)
                                                                                                         acaacaCCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGcc                                           >  1:174638/1‑151 (MQ=255)
                                                                                                          caacaCCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGccc                                          <  1:1788982/151‑1 (MQ=255)
                                                                                                          caacaCCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAAACACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGccc                                          >  1:3279850/1‑151 (MQ=255)
                                                                                                           aacaCCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCt                                         >  1:2960346/1‑151 (MQ=255)
                                                                                                           aacaCCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCt                                         <  1:1802149/151‑1 (MQ=255)
                                                                                                             cacCATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCg                                       <  1:3213184/151‑1 (MQ=255)
                                                                                                               ccATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTc                                     >  1:2082571/1‑151 (MQ=255)
                                                                                                               ccATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTc                                     >  1:390875/1‑151 (MQ=255)
                                                                                                                cATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCa                                    >  1:2449992/1‑151 (MQ=255)
                                                                                                                cATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCa                                    <  1:1762086/151‑1 (MQ=255)
                                                                                                                cATAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGACAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCa                                    >  1:1670420/1‑151 (MQ=255)
                                                                                                                  tAAAATATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCAtt                                  >  1:2061424/1‑151 (MQ=255)
                                                                                                                     aaTATTATTTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCca                               <  1:2894099/151‑1 (MQ=255)
                                                                                                                          tattTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATATCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATcc                          <  1:1875699/151‑1 (MQ=255)
                                                                                                                           attTCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAGCAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATccc                         >  1:3448439/1‑151 (MQ=255)
                                                                                                                            tttCTGTACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATCCCg                        <  1:1465493/151‑1 (MQ=255)
                                                                                                                                  tACAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATCCCGGGCAgg                  <  1:2928673/151‑1 (MQ=255)
                                                                                                                                    cAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATCCCGGGCAGGGa                >  1:2766604/1‑151 (MQ=255)
                                                                                                                                    cAGGCGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATCCCGGGCAGGGa                <  1:3285956/151‑1 (MQ=255)
                                                                                                                                        cGTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATCCCGGGCAGGGAATGc            >  1:3396379/1‑151 (MQ=255)
                                                                                                                                         gTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATCCCGGGCAGGGAATGcc           >  1:284661/1‑151 (MQ=255)
                                                                                                                                         gTCCCAAAAA‑TCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATCCCGGGCAGGGAATGcc           >  1:1427112/1‑151 (MQ=255)
                                                                                                                                           tcccaaaaaTCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATCCCGGGCAGGGAATGCCa          <  1:2716363/147‑1 (MQ=255)
                                                                                                                                           tcccaaaaaTCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATCCCGGGCAGGGAATGCCa          <  1:2279575/147‑1 (MQ=255)
                                                                                                                                               aaaaaTCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATCCCGGGCAGGGAATGCCaaaaa      <  1:2145222/151‑1 (MQ=255)
                                                                                                                                               aaaaaTCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATCCCGGGCAGGGAATGCCaaaaa      >  1:2808772/1‑151 (MQ=255)
                                                                                                                                                aaaaTCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATCCCGGGCAGGGAATGCCaaaaaa     >  1:85284/1‑151 (MQ=255)
                                                                                                                                                   |                                                                                                                                                      
AAAAGCCGCGGTATCAAAGCCTGTGAATTGTAATTCATCGGCGGAATGTCAGGAAAAAACA‑GTACTAGCCTTACAATCCACACAAGAACAAATACCGCCAGCACACAACACCATAAAATATTATTTCTGTACAGGCGTCCCAAAAAATCTGTTGTTTCTGAAAACAACAACCACAGCTACTAAACCGGGAAGTAGAAACAGAGGATGATAATAAAAAGCCGATGTCAAATCGAATTTAATCAAACTCAAATATGCCCTCGTCATTCCACATCCCGGGCAGGGAATGCCAAAAAAATT  >  CP002416/2246477‑2246773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑