| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP002416 | 237,742 | (A)7→6 | intergenic (+462/‑18) | Clo1313_0216 → / → Clo1313_0217 | SpoVG family protein/UDP‑N‑acetylglucosamine pyrophosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP002416 | 237,742 | 0 | A | . | 99.4% | 742.4 / ‑2.2 | 160 | intergenic (+462/‑18) | Clo1313_0216/Clo1313_0217 | SpoVG family protein/UDP‑N‑acetylglucosamine pyrophosphorylase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base . (75/84); total (75/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.69e-01 | |||||||||||
Only 100 of 168 total aligned reads displayed.
ATAAAATGCTACTTATTGCATAATTATATTATTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAAATGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTTATAGATCGGTGAAAAACGCA > CP002416/237597‑237891 | aTAAAATGCTACTTATTGCATAATTATATTATTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑Tgagga < 1:152747/151‑1 (MQ=255) aaaaTGCTACTTATTGCATAATTATATTATTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGaggagg > 1:568380/1‑151 (MQ=255) aaaaTGCTACTTATTGCATAATTATATTATTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAAATGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGaggagg > 1:2187151/1‑151 (MQ=255) aTGCTACTTATTGCATAATTATATTATTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGaaa < 1:540019/151‑1 (MQ=255) aCTTATTGCATAATTATATTATTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACtttt < 1:1674085/151‑1 (MQ=255) aCTTATTGCATAATTATATTATTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACtttt < 1:3059627/151‑1 (MQ=255) ttATTGCATAATTATATTATTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGATCTTTTAAAAAA‑TGAGGAGGAAACTTTTaa < 1:2133101/151‑1 (MQ=255) tATTGCATAATTATATTATTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAAt < 1:1787724/151‑1 (MQ=255) ttGCATAATTATATTATTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATgg < 1:329711/151‑1 (MQ=255) tGCATAATTATATTATTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGa < 1:1736782/151‑1 (MQ=255) aTAATTATATTATTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATg < 1:2584848/151‑1 (MQ=255) tAATTATATTATTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGc < 1:308024/151‑1 (MQ=255) attatattatTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCtt > 1:666130/1‑151 (MQ=255) atattatTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGAt > 1:66874/1‑151 (MQ=255) tattatTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATg < 1:1909853/151‑1 (MQ=255) tattGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCa < 1:1459402/151‑1 (MQ=255) ttAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCAtt > 1:1908607/1‑151 (MQ=255) tAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTc > 1:1199322/1‑151 (MQ=255) tAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTc > 1:1829500/1‑151 (MQ=255) tAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTgccgcc > 1:3323918/1‑151 (MQ=255) tAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTgccgcc > 1:2394561/1‑151 (MQ=255) tAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTgccgcc > 1:1052837/1‑151 (MQ=255) aaGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGccgccg < 1:1308253/151‑1 (MQ=255) aaGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGccgccg < 1:1886436/151‑1 (MQ=255) aGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCgg > 1:1054396/1‑151 (MQ=255) aaaGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTg < 1:2046071/151‑1 (MQ=255) aaaGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTg < 1:3033849/151‑1 (MQ=255) aaaGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTg > 1:2831020/1‑151 (MQ=255) cTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAgg < 1:136884/151‑1 (MQ=255) cTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAgg < 1:3191971/151‑1 (MQ=255) ttCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGa < 1:3214954/151‑1 (MQ=255) tCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGaa > 1:3337576/1‑151 (MQ=255) cATGAAGTAATTTCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGTCAGTCATTCTTGCCGCCGGTGAAGGata > 1:1119125/1‑149 (MQ=255) gAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGGCATTCTTGCCGCCGGTGAAGGAAAAAg > 1:2394503/1‑151 (MQ=255) aGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGaa > 1:781461/1‑151 (MQ=255) aTTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGaa < 1:2178898/151‑1 (MQ=255) aTTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGaa < 1:953161/151‑1 (MQ=255) ttGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAg < 1:2566774/151‑1 (MQ=255) ttGCAGGATTTCTTTATAAACAGTAAAGAAATCTTCAATATGCATTGAAAGCTTATTTTCTTGATGGAGGTATTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGAAGTCGTTCTTGCCGCCGGTGAAGGAAAAAgaaggaag < 1:3251447/151‑1 (MQ=255) aGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTT‑AAAAAAATGAGGAGGAAGCTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCa < 1:2749598/151‑1 (MQ=255) aTTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCaaaa > 1:813085/1‑151 (MQ=255) tttCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGTAGGAAAAAGAATGAAGTCCaaaaa > 1:1702165/1‑151 (MQ=255) tttCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCaaaaa > 1:348661/1‑151 (MQ=255) ttCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCaaaaaa < 1:45638/151‑1 (MQ=255) ttCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCaaaaaa < 1:698860/151‑1 (MQ=255) tCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAg < 1:2551549/151‑1 (MQ=255) tCTTTATAAACTCTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTAATGGAGCTTTTAAACAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCACTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAg > 1:3386069/1‑151 (MQ=255) cTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGc > 1:1345995/1‑151 (MQ=255) ttATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCaa > 1:3374403/1‑151 (MQ=255) ttATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTGTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATAGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCaa < 1:1749492/151‑1 (MQ=255) tataAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCaaa > 1:331973/1‑151 (MQ=255) tataAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCaaa > 1:439207/1‑151 (MQ=255) ataAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAg < 1:2792975/151‑1 (MQ=255) aaaCTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGt > 1:3238886/1‑151 (MQ=255) cTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTtgt > 1:2525079/1‑151 (MQ=255) cTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATAGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGTAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTtgt > 1:100074/1‑151 (MQ=255) gTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGc < 1:854503/151‑1 (MQ=255) gTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGc < 1:2088592/151‑1 (MQ=255) gTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGc < 1:167785/151‑1 (MQ=255) aaaGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCAt < 1:2698170/151‑1 (MQ=255) aaGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATg < 1:849683/151‑1 (MQ=255) aaTCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAAt > 1:3191197/1‑151 (MQ=255) aTCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAAtt > 1:1260903/1‑151 (MQ=255) cTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCa > 1:2611376/1‑151 (MQ=255) cTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCa < 1:601060/151‑1 (MQ=255) cAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAggg < 1:1289823/151‑1 (MQ=255) atGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGtata > 1:598285/1‑151 (MQ=255) ttGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCttt > 1:2054698/1‑151 (MQ=255) ttGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCttt < 1:2104915/151‑1 (MQ=255) tGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTg < 1:172947/151‑1 (MQ=255) gAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTgg < 1:1717562/151‑1 (MQ=255) aaaGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGt > 1:1590755/1‑151 (MQ=255) aaaGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGt > 1:1856382/1‑151 (MQ=255) aaaGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGt > 1:2662006/1‑151 (MQ=255) aaGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTggat > 1:1210937/1‑149 (MQ=255) aGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTg > 1:2932001/1‑151 (MQ=255) aGCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTg > 1:885568/1‑151 (MQ=255) gCTTTTTTTCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGa < 1:2206792/151‑1 (MQ=255) ttttttCTTGATGGAGCTTTTAAAAAA‑TGAGTAGGAAACTTTTAATTGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAATAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATCCCTTTGGTTGAATg < 1:2016518/151‑1 (MQ=255) ttttttCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATg > 1:567923/1‑151 (MQ=255) cgctcttccgatctgCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATgg < 1:1681622/137‑1 (MQ=255) tttCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGt < 1:702625/151‑1 (MQ=255) ttCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGtt < 1:1747808/151‑1 (MQ=255) tCTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGttt > 1:477416/1‑151 (MQ=255) cTTGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTta < 1:1396816/151‑1 (MQ=255) tttgtGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTtat < 1:763426/147‑1 (MQ=255) ttGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTtat < 1:768007/151‑1 (MQ=255) ttGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTtat < 1:1068695/151‑1 (MQ=255) tGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTtata > 1:2556659/1‑151 (MQ=255) tGATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTtata < 1:2755866/151‑1 (MQ=255) gATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTTATAg < 1:1442546/151‑1 (MQ=255) gATGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGAAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTTATAg < 1:2271728/151‑1 (MQ=255) aTGGAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTTATAGa < 1:373619/151‑1 (MQ=255) ggAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTTATAGATc < 1:1630100/151‑1 (MQ=255) gAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTTATAGATCg < 1:3055127/151‑1 (MQ=255) gAGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTTATAGATCg < 1:1193869/151‑1 (MQ=255) aGCTTTTAAAAAA‑TGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTTATAGATCgg < 1:1028346/151‑1 (MQ=255) taaaaaaTGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTTATAGATCGGTGaaaa < 1:3394021/150‑1 (MQ=255) taaaaaaTGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTTATAGATCGGTGaaaa > 1:1327441/2‑151 (MQ=255) aaTGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTTATAGATCGGTGAAAAACGCa < 1:39132/151‑1 (MQ=255) | ATAAAATGCTACTTATTGCATAATTATATTATTGGTTAGTAAACTAAGAAAGCTTCATGAAGTAATTGCAGGATTTCTTTATAAACTGTAAAGAAATCTTCAATATGCATTGAAAGCTTTTTTTCTTGATGGAGCTTTTAAAAAAATGAGGAGGAAACTTTTAATGGAATGCTTGATGGCAGTCATTCTTGCCGCCGGTGAAGGAAAAAGAATGAAGTCCAAAAAAGCAAAGGTTGTGCATGAAATTCAGGGTATACCTTTGGTTGAATGGGTTTATAGATCGGTGAAAAACGCA > CP002416/237597‑237891 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |